RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 SMIM11AP58511 58 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 DSTNP60981 165 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF763Q0D2J5 394 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 SNAPC1Q16533 368 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 LIPJQ5W064 366 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 SBSNQ6UWP8 590 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TMEM145Q8NBT3 493 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ADAMTS15Q8TE58 950 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 LCN9Q8WX39 176 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 ARMC5Q96C12 935 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 Q96MT0 163 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TEFMQ96QE5 360 aaKnown RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 YTHDF1Q9BYJ9 559 aaKnown RBP8.18□□□□□ -1.1
PTPRK-206ENST00000368215 TMEM245Q9H330 911 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 FAM118AQ9NWS6 357 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 RPS6KB2Q9UBS0 482 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 AASSQ9UDR5 926 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 SLC27A6Q9Y2P4 619 aa8.18□□□□□ -1.1
PTPRK-206ENST00000368215 PIPSLA2A3N6 862 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 CLDN25C9JDP6 229 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 H0YJX3 145 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 RASGRP1O95267 797 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 SOX14O95416 240 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 IMPDH2P12268 514 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 SDC1P18827 310 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 MYF6P23409 242 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 DDX6P26196 483 aaKnown RBP eCLIP8.17□□□□□ -1.11e-7■■■■■ 60
PTPRK-206ENST00000368215 CCR4P51679 360 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 RPS6KA3P51812 740 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 RGS1Q08116 209 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 MRPL58Q14197 206 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 PDZK1Q5T2W1 519 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 LRRTM4Q86VH4 590 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ZZZ3Q8IYH5 903 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 BTN2A2Q8WVV5 523 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 CEP295NLQ96MC4 621 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TRIB3Q96RU7 358 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 KAT8Q9H7Z6 458 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 PDFQ9HBH1 243 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 KRCC1Q9NPI7 259 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 KLHL1Q9NR64 748 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 NME6O75414 186 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 AP2A2O94973 939 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 C9P02748 559 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 MPC1LP0DKB6 136 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 C8orf89P0DMQ9 161 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF8P17098 575 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 IL12AP29459 219 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 NRIP1P48552 1158 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 FBXW4P57775 412 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 RPS26P62854 115 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 MXD1Q05195 221 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TARDBPQ13148 414 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 NFE2L1Q14494 772 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 CATSPEREQ5SY80 951 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 PARGQ86W56 976 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 CAMKK1Q8N5S9 505 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 PDPRQ8NCN5 879 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 KAT2AQ92830 837 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TRMT2BQ96GJ1 504 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TM9SF3Q9HD45 589 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TVP23BQ9NYZ1 205 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 EDDM13A0A1B0GTR0 161 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 A0A1B0GTW7 788 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ERI3O43414 337 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 LATO43561 262 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 F11P03951 625 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 RB1P06400 928 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 GDI1P31150 447 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 CCR8P51685 355 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 NCBP2P52298 156 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 RAB8AP61006 207 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 WDR5P61964 334 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 SFSWAPQ12872 951 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 RSBN1Q5VWQ0 802 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 HTR3DQ70Z44 454 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TEX47Q8TBZ9 253 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 GTF2H4Q92759 462 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ZBED6CLQ96FA7 236 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 SLC35G5Q96KT7 338 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 C3orf14Q9HBI5 128 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 HEBP1Q9NRV9 189 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TUBA8Q9NY65 449 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 NDOR1Q9UHB4 597 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 HEMK1Q9Y5R4 338 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 NUP214P35658 2090 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 H0YAE9 185 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 VIPP01282 170 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 IL3P08700 152 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ETFAP13804 333 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 FSHRP23945 695 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 PTX3P26022 381 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TIA1P31483 386 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ERVK-21P61565 698 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 VBP1P61758 197 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 TXNL4AP83876 142 aaKnown RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 KLHL12Q53G59 568 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 ZNF730Q6ZMV8 503 aa8.17□□□□□ -1.1
PTPRK-206ENST00000368215 CBARPQ8N350 705 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-206ENST00000368215 OXR1Q8N573 874 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms