RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 DRAXINQ8NBI3 349 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 OR5AK3PQ8NH89 298 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 KIAA1191Q96A73 305 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 S100A16Q96FQ6 103 aaKnown RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 PHOX2BQ99453 314 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 OR2AG1Q9H205 316 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 LRRN3Q9H3W5 708 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 ZNF395Q9H8N7 513 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 UBQLN2Q9UHD9 624 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 M0R036 132 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 CDH11P55287 796 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 RPA4Q13156 261 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 SYPL2Q5VXT5 272 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 AMZ2Q86W34 360 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 PLEKHO2Q8TD55 490 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 GRHL3Q8TE85 626 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 GAL3ST3Q96A11 431 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 KLRG2A4D1S0 409 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 GABARAPL2P60520 117 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 SLC3A1Q07837 685 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 DNM1P34Q6PK57 102 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 ASCC1Q8N9N2 400 aaKnown RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 OR56A1Q8NGH5 318 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 CTPS2Q9NRF8 586 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 HCN4Q9Y3Q4 1203 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 PDX1P52945 283 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 FAM110CQ1W6H9 321 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 TIGD4Q8IY51 512 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 TMEM145Q8NBT3 493 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 ZNF675Q8TD23 568 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 WFIKKN2Q8TEU8 576 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 SLC22A18Q96BI1 424 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 ZSCAN5AQ9BUG6 496 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 RANBP3Q9H6Z4 567 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 M0R233 179 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 ELK4P28324 431 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 OR12D2P58182 307 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 CTC1Q2NKJ3 1217 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 HCN2Q9UL51 889 aa16.63■□□□□ 0.25
SNAPC3-202ENST00000380821 SLC9A3P48764 834 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 SP3Q02447 781 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 ARFRP1Q13795 201 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 OCLNQ16625 522 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 TBRG1Q3YBR2 411 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 TMEM236Q5W0B7 351 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 PIM3Q86V86 326 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 NPAS3Q8IXF0 933 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 FBXO15Q8NCQ5 510 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 TMEM74Q96NL1 305 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 GAL3ST1Q99999 423 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 GDAP2Q9NXN4 497 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 SLC2A6Q9UGQ3 507 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 IL36AQ9UHA7 158 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 CNOT11Q9UKZ1 510 aaKnown RBP16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 J3QLW9 94 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 ZNF19P17023 458 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 KCNC3Q14003 757 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 EIF2S3LQ2VIR3 472 aaKnown RBP16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 CYBRD1Q53TN4 286 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 TXNRD3NBQ6F5E7 133 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 TMCO2Q7Z6W1 182 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 C14orf166Q9Y224 244 aaKnown RBP16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 NR2E3Q9Y5X4 410 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 COQ9O75208 318 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 DGKGP49619 791 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 BAIAP2L2Q6UXY1 529 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 OSTF1Q92882 214 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 GALPQ9UBC7 116 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 HSPB11Q9Y547 144 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 CDH10Q9Y6N8 788 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 DENRO43583 198 aaKnown RBP16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 NUAK1O60285 661 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 KLK1P06870 262 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 ATP1B2P14415 290 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 RPS3P23396 243 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■□□ 15.4
SNAPC3-202ENST00000380821 GADD45AP24522 165 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 RABGGTBP53611 331 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 SLC22A15Q8IZD6 547 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 SMURF1Q9HCE7 757 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 PIGVQ9NUD9 493 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 PCDHGB5Q9Y5G0 923 aa16.62■□□□□ 0.25
SNAPC3-202ENST00000380821 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 TGFB1P01137 390 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 MT-ND5P03915 603 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 CSN2P05814 226 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 ERVK-21P61565 698 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 GALNT2Q10471 571 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 GFOD2Q3B7J2 385 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 ANKRD26P1Q6NSI1 321 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 OR52E4Q8NGH9 312 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 ACDQ96AP0 544 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 FBXL18Q96ME1 805 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 EPYCQ99645 322 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 LPIN3Q9BQK8 851 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 TLX2O43763 284 aaPredicted RBP16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 TLL1O43897 1013 aa16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 HNRNPA0Q13151 305 aaKnown RBP16.61■□□□□ 0.25
SNAPC3-202ENST00000380821 RABL3Q5HYI8 236 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms