RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 YIPF2Q9BWQ6 316 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 TRIM54Q9BYV2 358 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 ZNF160Q9HCG1 818 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 LRRC4CQ9HCJ2 640 aa16.83■□□□□ 0.28
HDDC3-201ENST00000330334 IGHV1-45A0A0A0MS14 117 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 NDC80O14777 642 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ENO2P09104 434 aaPredicted RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 PRR35P0CG20 571 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ICAM2P13598 275 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 GRK3P35626 688 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 PAFAH1B1P43034 410 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 TSFMP43897 325 aaKnown RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 GLRBP48167 497 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ITGA8P53708 1063 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ILF2Q12905 390 aaKnown RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 FAM45BPQ6NSW5 357 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 TRMT10BQ6PF06 316 aaKnown RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ZC3H7AQ8IWR0 971 aaKnown RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 OR4K1Q8NGD4 311 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 FAM45AQ8TCE6 357 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 SSC4DQ8WTU2 575 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ATL1Q8WXF7 558 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 PSMF1Q92530 271 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 C8orf44Q96CB5 159 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 SNF8Q96H20 258 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 CAPZA3Q96KX2 299 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 WDR83Q9BRX9 315 aaKnown RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ZNF700Q9H0M5 742 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ATG10Q9H0Y0 220 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 AGPAT4Q9NRZ5 378 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 RIC8BQ9NVN3 520 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 ARL15Q9NXU5 204 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 MOCS1Q9NZB8 636 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 MAP10Q9P2G4 905 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 NOVA2Q9UNW9 492 aaKnown RBP16.82■□□□□ 0.28
HDDC3-201ENST00000330334 POLEQ07864 2286 aa16.82■□□□□ 0.28
HDDC3-201ENST00000330334 HIVEP3Q5T1R4 2406 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 BLACEA4D250 179 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 E7ESA3 106 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 KLHL18O94889 574 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 DDAH2O95865 285 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 SOX11P35716 441 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 MRPL49Q13405 166 aaKnown RBP16.81■□□□□ 0.28
HDDC3-201ENST00000330334 ZNF169Q14929 603 aaPredicted RBP16.81■□□□□ 0.28
HDDC3-201ENST00000330334 ZXDCQ2QGD7 858 aaPredicted RBP16.81■□□□□ 0.28
HDDC3-201ENST00000330334 EIF2S3LQ2VIR3 472 aaKnown RBP16.81■□□□□ 0.28
HDDC3-201ENST00000330334 RPUSD3Q6P087 351 aaKnown RBP16.81■□□□□ 0.28
HDDC3-201ENST00000330334 MBOAT1Q6ZNC8 495 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 STRA8Q7Z7C7 330 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 GPATCH11Q8N954 259 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 OR9A4Q8NGU2 314 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 FBXL8Q96CD0 374 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 CFAP36Q96G28 342 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 PWWP2AQ96N64 755 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 MKL2Q9ULH7 1088 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 CHMP2BQ9UQN3 213 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 MRPS2Q9Y399 296 aaKnown RBP16.81■□□□□ 0.28
HDDC3-201ENST00000330334 CSAG2Q9Y5P2 127 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 SLC22A7Q9Y694 548 aa16.81■□□□□ 0.28
HDDC3-201ENST00000330334 PABPN1LA6NDY0 278 aaKnown RBP16.8■□□□□ 0.28
HDDC3-201ENST00000330334 WIPF3A6NGB9 483 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 TTI1O43156 1089 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 LCMT2O60294 686 aaKnown RBP16.8■□□□□ 0.28
HDDC3-201ENST00000330334 SEMA7AO75326 666 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 IL10P22301 178 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 BCL6P41182 706 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 CCR8P51685 355 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 MGAT5Q09328 741 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 NR6A1Q15406 480 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 SYT16Q17RD7 645 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 HP1BP3Q5SSJ5 553 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-201ENST00000330334 ASPGQ86U10 573 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 SLC26A11Q86WA9 606 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 MFSD9Q8NBP5 474 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 SLC13A3Q8WWT9 602 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 HAS2Q92819 552 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 IMMP1LQ96LU5 166 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 OLFM1Q99784 485 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 TUBB6Q9BUF5 446 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 SLC17A6Q9P2U8 582 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 SH2B3Q9UQQ2 575 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
HDDC3-201ENST00000330334 ANKUB1A6NFN9 424 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 FFAR3O14843 346 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 GPR42O15529 346 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 C8orf89P0DMQ9 161 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 CDH1P12830 882 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 SNRPNP63162 240 aaKnown RBP16.79■□□□□ 0.28
HDDC3-201ENST00000330334 MAT1AQ00266 395 aaKnown RBP16.79■□□□□ 0.28
HDDC3-201ENST00000330334 PWP1Q13610 501 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 PCOLCEQ15113 449 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 LINC00696Q6ZRV3 163 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 ZC3HC1Q86WB0 502 aaKnown RBP16.79■□□□□ 0.28
HDDC3-201ENST00000330334 BBOF1Q8ND07 529 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 ST6GALNAC3Q8NDV1 305 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 OR51Q1Q8NH59 317 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 PRR7Q8TB68 274 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 METTL21AQ8WXB1 218 aa16.79■□□□□ 0.28
HDDC3-201ENST00000330334 OR4K3Q96R72 315 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms