RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 GPR21Q99679 349 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 SLC30A3Q99726 388 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 TRIM56Q9BRZ2 755 aaKnown RBP7.23□□□□□ -1.25
NPC1-208ENST00000590301 KCNF1Q9H3M0 494 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 PARVBQ9HBI1 364 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 TMEM184CQ9NVA4 438 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 RIC8BQ9NVN3 520 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 MAP10Q9P2G4 905 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 GALPQ9UBC7 116 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 TRPC4Q9UBN4 977 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 ASIC3Q9UHC3 531 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 PCYOX1Q9UHG3 505 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 TSR3Q9UJK0 312 aaKnown RBP7.23□□□□□ -1.25
NPC1-208ENST00000590301 RUVBL1Q9Y265 456 aaKnown RBP7.23□□□□□ -1.25
NPC1-208ENST00000590301 MAU2Q9Y6X3 613 aa7.23□□□□□ -1.25
NPC1-208ENST00000590301 SPTAN1Q13813 2472 aaKnown RBP7.23□□□□□ -1.25
NPC1-208ENST00000590301 DOPEY1Q5JWR5 2465 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 IDSB3KWA1 339 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 C3orf80F5H4A9 247 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 DNALI1O14645 258 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 NDC80O14777 642 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 HAUS5O94927 633 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 BMP10O95393 424 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 MED26O95402 600 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 NSA2O95478 260 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 CBX6O95503 412 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 HEXBP07686 556 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 HIST1H2AGP0C0S8 130 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 MYBL2P10244 700 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 HIST1H2ADP20671 130 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 MAPK1P28482 360 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 IMPA1P29218 277 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 GRK3P35626 688 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 AP1S2P56377 157 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 FOXL2P58012 376 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 IL2P60568 153 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 TBPL1P62380 186 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 SKP1P63208 163 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 MPP1Q00013 466 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 CUL1Q13616 776 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 FRG1Q14331 258 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 ZNF169Q14929 603 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 MORF4L2Q15014 288 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 INAQ16352 499 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 PRR30Q53SZ7 412 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 SWT1Q5T5J6 900 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 NIPAL1Q6NVV3 410 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 RPUSD3Q6P087 351 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 SHISA6Q6ZSJ9 500 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 PIWIL4Q7Z3Z4 852 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 ADCK2Q7Z695 626 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 CUZD1Q86UP6 607 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 C17orf64Q86WR6 236 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 AGGF1Q8N302 714 aaeCLIP7.22□□□□□ -1.25
NPC1-208ENST00000590301 ARHGEF39Q8N4T4 335 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 CISD2Q8N5K1 135 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 TBC1D19Q8N5T2 526 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 METTL27Q8N6F8 245 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 CAMKVQ8NCB2 501 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 DNAJB14Q8TBM8 379 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 ATL1Q8WXF7 558 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 MMABQ96EY8 250 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 THOC3Q96J01 351 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 HIST1H2AHQ96KK5 128 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 HIST1H2AJQ99878 128 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 HAUS8Q9BT25 410 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 H2AFJQ9BTM1 129 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 SGPP1Q9BX95 441 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 TRIM54Q9BYV2 358 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 ZNF160Q9HCG1 818 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 IARS2Q9NSE4 1012 aaKnown RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 ASF1BQ9NVP2 202 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 LUZP4Q9P127 313 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 STOX2Q9P2F5 926 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 EGFL7Q9UHF1 273 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 TEX15Q9BXT5 2789 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 RP1L1Q8IWN7 2480 aaPredicted RBP7.22□□□□□ -1.25
NPC1-208ENST00000590301 RELNP78509 3460 aa7.22□□□□□ -1.25
NPC1-208ENST00000590301 SPENQ96T58 3664 aaKnown RBP7.21□□□□□ -1.25
NPC1-208ENST00000590301 LOC102723996A0A087X1L8 192 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 IGHV1-45A0A0A0MS14 117 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 DYTNA2CJ06 578 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 ANKUB1A6NFN9 424 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 H7BY64 318 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 HAT1O14929 419 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 FOXS1O43638 330 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 NRP2O60462 931 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 ENO2P09104 434 aaPredicted RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 SLC35G6P0C7Q6 338 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 PRR35P0CG20 571 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 COX6A1P12074 109 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 IL10P22301 178 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 GLRBP48167 497 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 YBX1P67809 324 aaKnown RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 DHX9Q08211 1270 aaKnown RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 CDC16Q13042 620 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 MRPL49Q13405 166 aaKnown RBP7.21□□□□□ -1.26
NPC1-208ENST00000590301 HKDC1Q2TB90 917 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 VWA2Q5GFL6 755 aa7.21□□□□□ -1.26
NPC1-208ENST00000590301 CAPN13Q6MZZ7 669 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms