RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 PDP1Q9P0J1 537 aaPredicted RBP11.13□□□□□ -0.63
DDB1-224ENST00000545894 DLGAP4Q9Y2H0 992 aa11.13□□□□□ -0.63
DDB1-224ENST00000545894 MYO7AQ13402 2215 aa11.13□□□□□ -0.63
DDB1-224ENST00000545894 CHD5Q8TDI0 1954 aa11.13□□□□□ -0.63
DDB1-224ENST00000545894 NRG2O14511 850 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 UPK1BO75841 260 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 SLC25A14O95258 325 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 FABP3P05413 133 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 POU2F2P09086 479 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 PRPS2P11908 318 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 EFNA1P20827 205 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 KRT20P35900 424 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 HMGCLP35914 325 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 CDKN2CP42773 168 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 TPTEP56180 551 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 NTHL1P78549 312 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 SELENBP1Q13228 472 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 TAF12Q16514 161 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 DOK6Q6PKX4 331 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 FAM151BQ6UXP7 276 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 GRASPQ7Z6J2 395 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 SERPINA11Q86U17 422 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 ZBTB2Q8N680 514 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 KIAA1958Q8N8K9 716 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 SMG7Q92540 1137 aaKnown RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 EID2BQ96D98 161 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 MTFMTQ96DP5 389 aaKnown RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 MSLNLQ96KJ4 702 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 BOCQ9BWV1 1114 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 AASDHPPTQ9NRN7 309 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 KRT84Q9NSB2 600 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 KIF17Q9P2E2 1029 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 DNMT3LQ9UJW3 386 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 RPS6KA6Q9UK32 745 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 PNMA8BQ9ULN7 279 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 EVPLLA8MZ36 301 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 hCG_2039718K7EN88 272 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 RFXANKO14593 260 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 CLDN9O95484 217 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 PRAMEF1O95521 474 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 PRAMEF12O95522 483 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 OXSR1O95747 527 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 LCKP06239 509 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 PTPN2P17706 415 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 ATP5C1P36542 298 aaKnown RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 PPP3CCP48454 512 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 CLK1P49759 484 aaKnown RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 HNRNPFP52597 415 aaKnown RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 TUBA1BP68363 451 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 SLC14A1Q13336 389 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 ZNF404Q494X3 552 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 DEPDC1Q5TB30 811 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 UBE2UQ5VVX9 321 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 RNF219Q5W0B1 726 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 TUBA3EQ6PEY2 450 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 AHSA2Q719I0 299 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 TUBA1AQ71U36 451 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 ZNF551Q7Z340 670 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 TMEM150AQ86TG1 271 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 DENND1CQ8IV53 801 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 BEND7Q8N7W2 519 aaPredicted RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 ATG16L2Q8NAA4 619 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 SLC38A4Q969I6 547 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 TESCQ96BS2 214 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 TRMT2BQ96GJ1 504 aaKnown RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 TSSK3Q96PN8 268 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 MMP27Q9H306 513 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 IL21Q9HBE4 155 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 RASSF1Q9NS23 344 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 SAMHD1Q9Y3Z3 626 aaKnown RBP11.12□□□□□ -0.63
DDB1-224ENST00000545894 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 PRSS21Q9Y6M0 314 aa11.12□□□□□ -0.63
DDB1-224ENST00000545894 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 SAGE2PA6NJ88 616 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 TAF4O00268 1085 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 STK16O75716 305 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 DIRAS1O95057 198 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 B3GALT4O96024 378 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 PDYNP01213 254 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 SEMG1P04279 462 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 RHOP08100 348 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 CTPS1P17812 591 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 EPHA2P29317 976 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 UGT2B10P36537 528 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 TGFBR1P36897 503 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 CCR2P41597 374 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 PCYT1AP49585 367 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 SGSHP51688 502 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 CSNK2BP67870 215 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 ARF5P84085 180 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 CPSF6Q16630 551 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDB1-224ENST00000545894 ZNF181Q2M3W8 571 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 ZCCHC8Q6NZY4 707 aaKnown RBP11.11□□□□□ -0.63
DDB1-224ENST00000545894 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
DDB1-224ENST00000545894 CHST9Q7L1S5 443 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms