RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 IGLV3-12A0A075B6K2 115 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 GFYI3L273 518 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 PGRMC1O00264 195 aaKnown RBP11.27□□□□□ -0.6
GABPB1-206ENST00000543881 FFAR3O14843 346 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 GPR42O15529 346 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 TDGF1P3P51864 188 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 TIAL1Q01085 375 aaKnown RBP eCLIP11.27□□□□□ -0.6
GABPB1-206ENST00000543881 PRDX1Q06830 199 aaKnown RBP11.27□□□□□ -0.6
GABPB1-206ENST00000543881 MFAP5Q13361 173 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 RBBP7Q16576 425 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 LONRF1Q17RB8 773 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 MUM1Q2TAK8 710 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 TUBB8Q3ZCM7 444 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 ICE2Q659A1 982 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 ISLR2Q6UXK2 745 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 CPNE9Q8IYJ1 553 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 SLC35F6Q8N357 371 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.6
GABPB1-206ENST00000543881 FBXO15Q8NCQ5 510 aaPredicted RBP11.27□□□□□ -0.6
GABPB1-206ENST00000543881 OR1N1Q8NGS0 311 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 CD200R1Q8TD46 325 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 KCNJ9Q92806 393 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 C8orf44Q96CB5 159 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 CCDC120Q96HB5 630 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 CABS1Q96KC9 395 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 OR2A5Q96R48 311 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 OSBPL9Q96SU4 736 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 GPR21Q99679 349 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 CRB3Q9BUF7 120 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 KLHL42Q9P2K6 505 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 ZNF282Q9UDV7 671 aaPredicted RBP11.27□□□□□ -0.6
GABPB1-206ENST00000543881 FBXO5Q9UKT4 447 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 RUVBL1Q9Y265 456 aaKnown RBP11.27□□□□□ -0.6
GABPB1-206ENST00000543881 MAD1L1Q9Y6D9 718 aa11.27□□□□□ -0.6
GABPB1-206ENST00000543881 CCDC168Q8NDH2 2452 aa11.27□□□□□ -0.61
GABPB1-206ENST00000543881 ITPR3Q14573 2671 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 TRGV8A0A0C4DH27 118 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 SMAPO00193 183 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 CCL21O00585 134 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 P2RX6O15547 441 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 FOXS1O43638 330 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 PHF2O75151 1096 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 BANF1O75531 89 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 KLHL18O94889 574 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 SYF2O95926 243 aaKnown RBP11.26□□□□□ -0.61
GABPB1-206ENST00000543881 MPC1LP0DKB6 136 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 ERVK-10P10266 1014 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 HSD17B2P37059 387 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 SKIV2L2P42285 1042 aaKnown RBP11.26□□□□□ -0.61
GABPB1-206ENST00000543881 EMP3P54852 163 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 NAA25Q14CX7 972 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 TTLL9Q3SXZ7 439 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 HSP90AA5PQ58FG0 334 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 RNASEH2BQ5TBB1 312 aaKnown RBP11.26□□□□□ -0.61
GABPB1-206ENST00000543881 ATG9BQ674R7 924 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 GFRALQ6UXV0 394 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 PIWIL4Q7Z3Z4 852 aaKnown RBP11.26□□□□□ -0.61
GABPB1-206ENST00000543881 PLD3Q8IV08 490 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 ZNF295-AS1Q8N0V1 137 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 SHISA5Q8N114 240 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 CSNK1A1LQ8N752 337 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 AMER2Q8N7J2 671 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 AMER3Q8N944 861 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 ACTRT1Q8TDG2 376 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 NR4A3Q92570 626 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 MIEF2Q96C03 454 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 TAAR6Q96RI8 345 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 LMF1Q96S06 567 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 AARSD1Q9BTE6 412 aaKnown RBP11.26□□□□□ -0.61
GABPB1-206ENST00000543881 ABCF3Q9NUQ8 709 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 C3orf18Q9UK00 162 aa11.26□□□□□ -0.61
GABPB1-206ENST00000543881 TACC2O95359 2948 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 HAT1O14929 419 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 VPS26AO75436 327 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 ENO3P13929 434 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-206ENST00000543881 EZRP15311 586 aaKnown RBP11.25□□□□□ -0.61
GABPB1-206ENST00000543881 FBLP22087 321 aaKnown RBP11.25□□□□□ -0.61
GABPB1-206ENST00000543881 GABRB3P28472 473 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 IMPA1P29218 277 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 FNTAP49354 379 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 CARSP49589 748 aaKnown RBP11.25□□□□□ -0.61
GABPB1-206ENST00000543881 EFNA3P52797 238 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 ARG2P78540 354 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 OCA2Q04671 838 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 DSG2Q14126 1118 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 TESK1Q15569 626 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 MTFR2Q6P444 385 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 TMEM207Q6UWW9 146 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 UBE2R2Q712K3 238 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-206ENST00000543881 LMNTD2Q8IXW0 634 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 PPIL6Q8IXY8 311 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.25□□□□□ -0.61
GABPB1-206ENST00000543881 VPS50Q96JG6 964 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 NAP1L3Q99457 506 aaPredicted RBP11.25□□□□□ -0.61
GABPB1-206ENST00000543881 NDNQ99608 321 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 CCDC68Q9H2F9 335 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 ZNF160Q9HCG1 818 aa11.25□□□□□ -0.61
GABPB1-206ENST00000543881 IARS2Q9NSE4 1012 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms