RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 PNCKQ6P2M8 343 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 NEK10Q6ZWH5 1172 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 TSPAN33Q86UF1 283 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 DNAJC22Q8N4W6 341 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 DNAJB8Q8NHS0 232 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 SKA2Q8WVK7 121 aaPredicted RBP11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 FEVQ99581 238 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 EMILIN2Q9BXX0 1053 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC29A3Q9BZD2 475 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 ROGDIQ9GZN7 287 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC32A1Q9H598 525 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 FBXL12Q9NXK8 326 aa11.36□□□□□ -0.59
PDZRN3-203ENST00000462146 NINQ8N4C6 2090 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ADAM12O43184 909 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 SMAD6O43541 496 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 CDK1P06493 297 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ASGR1P07306 291 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ANXA5P08758 320 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 PAX3P23760 479 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 CTGFP29279 349 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 TRPC1P48995 793 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 TUBA1BP68363 451 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 MRPL58Q14197 206 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 LRRC66Q68CR7 880 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 PRSS55Q6UWB4 352 aaPredicted RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 TUBA1AQ71U36 451 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 GPR155Q7Z3F1 870 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 CHCHD4Q8N4Q1 142 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 FAM193BQ96PV7 902 aaPredicted RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 HHIPQ96QV1 700 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 SDHCQ99643 169 aaPredicted RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 NIPSNAP1Q9BPW8 284 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 BBS2Q9BXC9 721 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 NXF2Q9GZY0 626 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ERVK13-1Q9NX77 482 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 SNX8Q9Y5X2 465 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 HAT1O14929 419 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 RPLP0P05388 317 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 LAMP1P11279 417 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 GPX2P18283 190 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ITGALP20701 1170 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 OR1E2P47887 323 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 DGKEP52429 567 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ELP6Q0PNE2 266 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 RSBN1Q5VWQ0 802 aaPredicted RBP11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ADNP2Q6IQ32 1131 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 RFLNAQ6ZTI6 216 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 TAS1R1Q7RTX1 841 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 SYT12Q8IV01 421 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 VRK3Q8IV63 474 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 SH3KBP1Q96B97 665 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 KCNS3Q9BQ31 491 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 GABARAPL3Q9BY60 117 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 RNF38Q9H0F5 515 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 RUBCNLQ9H714 662 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF226Q9NYT6 803 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC22A14Q9Y267 594 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 UGT2A1Q9Y4X1 527 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 PCDHGB6Q9Y5F9 930 aa11.35□□□□□ -0.59
PDZRN3-203ENST00000462146 GLYATL1P3A0A0U1RQE8 302 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 A8MV72 311 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 TMEM189-UBE2V1I3L0A0 370 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 PTTG1O95997 202 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 COX7A2P14406 83 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 CCR7P32248 378 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 S100A5P33763 92 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 HNF1BP35680 557 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 GGT2P36268 569 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 DDX39BQ13838 428 aaKnown RBP11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 PTCHD3Q3KNS1 767 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 ARMCX4Q5H9R4 360 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 ANKS3Q6ZW76 656 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 UBE2R2Q712K3 238 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 NANOGNBQ7Z5D8 188 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 TMEM173Q86WV6 379 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 ZSWIM9Q86XI8 627 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 CYP4Z2PQ8N1L4 340 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 ELMOD1Q8N336 334 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 TCAIMQ8N3R3 496 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 SLC5A8Q8N695 610 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 CMTM7Q96FZ5 175 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 ATG10Q9H0Y0 220 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 ANKHQ9HCJ1 492 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 PCDHGA3Q9Y5H0 932 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 ANAPC1Q9H1A4 1944 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 CLCA1A8K7I4 914 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 AGRPO00253 132 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 CTDSP2O14595 271 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 INPPL1O15357 1258 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 GCM2O75603 506 aaPredicted RBP11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 CCNKO75909 580 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 POU2F1P14859 743 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 S100A1P23297 94 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 MTAPQ13126 283 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 MBTPS1Q14703 1052 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 INO80DQ53TQ3 878 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms