RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 CHDHQ8NE62 594 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 PIK3C3Q8NEB9 887 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 SETD7Q8WTS6 366 aaKnown RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 FBLIM1Q8WUP2 373 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 THAP11Q96EK4 314 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 DTD2Q96FN9 168 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 MED8Q96G25 268 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 LINC00615Q96LM1 132 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 COQ10AQ96MF6 247 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 PKP4Q99569 1192 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 RAD9AQ99638 391 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 APOL4Q9BPW4 351 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 BHLHE41Q9C0J9 482 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 RAD21L1Q9H4I0 556 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 MBD1Q9UIS9 605 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 VPS4AQ9UN37 437 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 E7EQ34 232 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 RNASET2O00584 256 aaKnown RBP17.46■□□□□ 0.39
CD40-201ENST00000372276 RB1P06400 928 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 ANXA4P09525 319 aaPredicted RBP17.46■□□□□ 0.39
CD40-201ENST00000372276 CISD3P0C7P0 127 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 ACRP10323 421 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 DDX5P17844 614 aaKnown RBP17.46■□□□□ 0.39
CD40-201ENST00000372276 PTX3P26022 381 aaPredicted RBP17.46■□□□□ 0.39
CD40-201ENST00000372276 IMPA1P29218 277 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 CSNK2BP67870 215 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 DHCR24Q15392 516 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 LRRC73Q5JTD7 316 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 GPR107Q5VW38 600 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 PLPP4Q5VZY2 271 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 OTOP2Q7RTS6 562 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 GPR155Q7Z3F1 870 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 OR7G3Q8NG95 312 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 CYB5D2Q8WUJ1 264 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 MTERF3Q96E29 417 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 EGLN2Q96KS0 407 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 AMBRA1Q9C0C7 1298 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 GPN2Q9H9Y4 310 aaPredicted RBP17.46■□□□□ 0.39
CD40-201ENST00000372276 ADPRHL2Q9NX46 363 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 ATP6V1HQ9UI12 483 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 TPRKBQ9Y3C4 175 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 PCDHGB1Q9Y5G3 927 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 PCDHGA8Q9Y5G5 932 aa17.46■□□□□ 0.39
CD40-201ENST00000372276 H3BMQ9 156 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 ZNF682O95780 498 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 SEMG1P04279 462 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 CTSLP07711 333 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 ADH5P11766 374 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 CCNA2P20248 432 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 CD22P20273 847 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 IGFBP5P24593 272 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 ITGB7P26010 798 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 ITGB8P26012 769 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 RPL10P27635 214 aaKnown RBP17.45■□□□□ 0.38
CD40-201ENST00000372276 ELK4P28324 431 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 TIA1P31483 386 aaKnown RBP eCLIP17.45■□□□□ 0.38
CD40-201ENST00000372276 ISL1P61371 349 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 RBBP4Q09028 425 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 SPIDRQ14159 915 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 SLCO4C1Q6ZQN7 724 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 HORMAD1Q86X24 394 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 SYNPOQ8N3V7 929 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 OR7A2PQ8NGA2 310 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 GOT1L1Q8NHS2 421 aaPredicted RBP17.45■□□□□ 0.38
CD40-201ENST00000372276 SNX19Q92543 992 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 PPP1R16AQ96I34 528 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 PAWRQ96IZ0 340 aaKnown RBP17.45■□□□□ 0.38
CD40-201ENST00000372276 COG8Q96MW5 612 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 DPEP2Q9H4A9 486 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 SOX17Q9H6I2 414 aaPredicted RBP17.45■□□□□ 0.38
CD40-201ENST00000372276 TPT1P8Q9HAU6 139 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 EBF1Q9UH73 591 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 GPR34Q9UPC5 381 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 NAALAD2Q9Y3Q0 740 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 WNT6Q9Y6F9 365 aa17.45■□□□□ 0.38
CD40-201ENST00000372276 BCKDKO14874 412 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 C1orf105O95561 183 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 ITIH1P19827 911 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 PCGF2P35227 344 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 CTSCP53634 463 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 DPTQ07507 201 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 EIF4HQ15056 248 aaKnown RBP17.44■□□□□ 0.38
CD40-201ENST00000372276 NEDD8Q15843 81 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 ZC3H7AQ8IWR0 971 aaKnown RBP17.44■□□□□ 0.38
CD40-201ENST00000372276 NPAS3Q8IXF0 933 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 LAS2Q8IYD9 372 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 SPARTQ8N0X7 666 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 NATD1Q8N6N6 113 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 OR8D1Q8WZ84 308 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 MTERF1Q99551 399 aaKnown RBP17.44■□□□□ 0.38
CD40-201ENST00000372276 EBPLQ9BY08 206 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 FANCEQ9HB96 536 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 CCNB1IP1Q9NPC3 277 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 SCN3BQ9NY72 215 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 CDC14AQ9UNH5 594 aa17.44■□□□□ 0.38
CD40-201ENST00000372276 FAF1Q9UNN5 650 aaPredicted RBP17.44■□□□□ 0.38
CD40-201ENST00000372276 WBP11Q9Y2W2 641 aaKnown RBP17.44■□□□□ 0.38
CD40-201ENST00000372276 MAGED1Q9Y5V3 778 aaPredicted RBP17.44■□□□□ 0.38
CD40-201ENST00000372276 MKI67P46013 3256 aaKnown RBP17.44■□□□□ 0.38
CD40-201ENST00000372276 EDDM13A0A1B0GTR0 161 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms