RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Ifi47Q61635 420 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 DgkbQ6NS52 802 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 PstkQ8BP74 359 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ikzf5Q8BU00 419 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Sept11Q8C1B7 431 aaKnown RBP14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Q8C3W1 322 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 KptnQ8VCX6 430 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr809Q8VEX8 328 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr1302Q8VGE9 315 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mau2Q9D2X5 619 aaKnown RBP14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Paqr5Q9DCU0 330 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr630Q9EQQ7 319 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 ItgaxQ9QXH4 1169 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 UxtQ9WTZ0 157 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gipc2Q9Z2H7 314 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 AspmQ8CJ27 3122 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gbp6A0A0G2JDV3 611 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tcrg-V3A0A0G2JEW2 117 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm3173A6NAS3 172 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Zfp964B2RR88 472 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm3020E9Q3J7 150 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm2897K7N6T7 172 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tssk2O54863 358 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 F2P19221 618 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Lrig1P70193 1091 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Akr1c6P70694 323 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 NrtnP97463 195 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Slc22a15Q504N2 544 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Xkr9Q5GH62 373 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Nadsyn1Q711T7 725 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr1344Q7TQV3 321 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pqlc1Q80XM9 271 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pcdh20Q8BIZ0 952 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ppp1r1cQ8BKK4 108 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Clec4gQ8BNX1 294 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cpne3Q8BT60 533 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm3411Q8C7R2 150 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rnf222Q8CEF8 211 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Coq6Q8R1S0 476 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Col26a1Q91VF6 440 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Itfg1Q99KW9 610 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ankrd61Q9CQM6 421 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gm16286Q9CQX6 220 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Zswim1Q9CWV7 455 aaKnown RBP14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mcemp1Q9D8U6 183 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ndrg2Q9QYG0 371 aaKnown RBP14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 CalcrlQ9R1W5 463 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Zbtb18Q9WUK6 522 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Racgap1Q9WVM1 628 aa14.3□□□□□ -0.12
Nup88-202ENSMUST00000108530 Fbxo47A2A6H3 451 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Phf11A6H5X4 337 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 L3mbtl4B1B1A0 621 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Gtf2h4O70422 463 aaKnown RBP14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Matn4O89029 624 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Klk1b8P07628 261 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 CatP24270 527 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Vat1Q62465 406 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Cyp2r1Q6VVW9 501 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rfx4Q7TNK1 735 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 AptxQ7TQC5 342 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Fjx1Q8BQB4 450 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mptx1Q8R1M8 219 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pi4kaE9Q3L2 2105 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pcsk5Q04592 1877 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Faap100A2ACJ2 879 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Itih4A6X935 942 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Phf11cB4XVP9 339 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Zfp808B8JJZ4 753 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Enthd1E9Q1Z2 618 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Hk2O08528 917 aaKnown RBP14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Lhx8O35652 367 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ctnnd2O35927 1247 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Psmb5O55234 264 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Hnf4aP49698 474 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Mthfd1lQ3V3R1 977 aaKnown RBP14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Slc23a3Q60850 611 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Zc3h11aQ6NZF1 792 aaKnown RBP14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tha1Q6XPS7 400 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Clptm1Q8VBZ3 664 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Olfr1414Q8VGU5 312 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rab28Q99KL7 221 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 GsdmcQ99NB5 468 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rsph14Q9D3W1 341 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Tssc4Q9JHE7 317 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Vps29Q9QZ88 182 aa14.29□□□□□ -0.12
Nup88-202ENSMUST00000108530 Col4a4Q9QZR9 1682 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 A0A1L1STL9 112 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Trmt1lA2RSY6 728 aaKnown RBP14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Lipo4D3Z608 396 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rnf165E9QAU8 347 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 1700122O11RikJ3QPW6 241 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Ly6aP05533 134 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Rps13P62301 151 aaKnown RBP14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pfdn4Q3UWL8 134 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Flot2Q60634 428 aaKnown RBP14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 PtprcapQ64697 197 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Pex11gQ6P6M5 241 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Fbxl19Q6PB97 674 aa14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Kansl1Q80TG1 1036 aaKnown RBP14.28□□□□□ -0.12
Nup88-202ENSMUST00000108530 Sra1Q80VJ2 232 aa14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms