RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	GCM1	Q9NP62	436 aa		15.98	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ATPIF1	Q9UII2	106 aa		15.98	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CFH	P08603	1231 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	PLP2	Q04941	152 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	PHC2	Q8IXK0	858 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	SLC38A4	Q969I6	547 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	RNF32	Q9H0A6	362 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ASTN1	O14525	1302 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MMP20	O60882	483 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	AP3S2	P59780	193 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	DLK2	Q6UY11	383 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	UROC1	Q96N76	676 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	PHB2	Q99623	299 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	WDR12	Q9GZL7	423 aa	Known RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CRTAC1	Q9NQ79	661 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CDH4	P55283	916 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	KRBOX4	Q5JUW0	171 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	EBNA1BP2	Q99848	306 aa	Known RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	GTF2IRD1	Q9UHL9	959 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MAP2	P11137	1827 aa	Known RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	STOM	P27105	288 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	GABRB2	P47870	512 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	LSS	P48449	732 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	NUDT6	P53370	316 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MRPS5	P82675	430 aa	Known RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	RPA4	Q13156	261 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MAP4K3	Q8IVH8	894 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	WAC	Q9BTA9	647 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ATG5	Q9H1Y0	275 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	IFT80	Q9P2H3	777 aa	Predicted RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	LAMP5	Q9UJQ1	280 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ICK	Q9UPZ9	632 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MGAT4B	Q9UQ53	548 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	hCG_1818297	A0A087WSY0	165 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276		A8MVJ9	347 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CCRL2	O00421	344 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MAPT	P10636	758 aa	Known RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	POLR2C	P19387	275 aa	Predicted RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	PTAFR	P25105	342 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	NMBR	P28336	390 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	GK	P32189	559 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CLCNKA	P51800	687 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	FGL1	Q08830	312 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	WSCD2	Q2TBF2	565 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	TMEM214	Q6NUQ4	689 aa	Known RBP	15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	USP53	Q70EK8	1073 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	SPATA31A5	Q5VU36	1347 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	SPATA31A7	Q8IWB4	1347 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	TCRBV21S2A2	A0A5A6	115 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	RAB8A	P61006	207 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	FMO1	Q01740	532 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	PRRT3	Q5FWE3	981 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	SH3RF1	Q7Z6J0	888 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	NUDT15	Q9NV35	164 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	GRHPR	Q9UBQ7	328 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	FADS3	Q9Y5Q0	445 aa		15.97	■□□□□ 0.15
CACNA1A-238	ENST00000637276	PRMT5	O14744	637 aa	Predicted RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MFSD11	O43934	449 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CLEC3B	P05452	202 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	NR1H2	P55055	460 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ECM1	Q16610	540 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	C15orf52	Q6ZUT6	534 aa	Known RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	OR52E4	Q8NGH9	312 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MRPS17	Q9Y2R5	130 aa	Known RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ITSN1	Q15811	1721 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ZNF850	A8MQ14	1090 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	NXPH3	O95157	252 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CD48	P09326	243 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	KIR3DL1	P43629	444 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	S100A12	P80511	92 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	CAPS	Q13938	189 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	IL17A	Q16552	155 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	SHISA6	Q6ZSJ9	500 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	UPF1	Q92900	1129 aa	Known RBP eCLIP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	KIAA1143	Q96AT1	154 aa	Predicted RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	HSPB6	O14558	160 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ERI3	O43414	337 aa	Known RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	RAD1	O60671	282 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	TBX18	O95935	607 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	SLC2A1	P11166	492 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	C9orf135	Q5VTT2	229 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	TMEM192	Q8IY95	271 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	OR9K2	Q8NGE7	335 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	SPRYD4	Q8WW59	207 aa	Predicted RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	FBXL12	Q9NXK8	326 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	TAC3	Q9UHF0	121 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	RIC1	Q4ADV7	1423 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	RPP40	O75818	363 aa	Known RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	JUP	P14923	745 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	FIGN	Q5HY92	759 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	MPP7	Q5T2T1	576 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	TMEM17	Q86X19	198 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	OR13C3	Q8NGS6	347 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	GLYATL2	Q8WU03	294 aa		15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	NECAB3	Q96P71	396 aa	Predicted RBP	15.96	■□□□□ 0.15
CACNA1A-238	ENST00000637276	AIRE	O43918	545 aa		15.96	■□□□□ 0.14
CACNA1A-238	ENST00000637276	PRAMEF12	O95522	483 aa		15.96	■□□□□ 0.14
CACNA1A-238	ENST00000637276	ARAF	P10398	606 aa		15.96	■□□□□ 0.14

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms