RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 LATO43561 262 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 ZNF853P0CG23 659 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 GABRB1P18505 474 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 MNDAP41218 407 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 TRAPPC10P48553 1259 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 CLCN4P51793 760 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 LDB1Q86U70 411 aaPredicted RBP0.85□□□□□ -2.27
CEP290-208ENST00000604024 SSC4DQ8WTU2 575 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 SSMEM1Q8WWF3 244 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 CNRIP1Q96F85 164 aaPredicted RBP0.85□□□□□ -2.27
CEP290-208ENST00000604024 PERPQ96FX8 193 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 FAM20AQ96MK3 541 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 DGAT2Q96PD7 388 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 MRPL1Q9BYD6 325 aaKnown RBP0.85□□□□□ -2.27
CEP290-208ENST00000604024 DAPK2Q9UIK4 370 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 HERC1Q15751 4861 aa0.85□□□□□ -2.27
CEP290-208ENST00000604024 NEMP2A6NFY4 417 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 TNFSF12O43508 249 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 LDHAP00338 332 aaKnown RBP0.84□□□□□ -2.27
CEP290-208ENST00000604024 PPP2R2BQ00005 443 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 NAAAQ02083 359 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 KIAA0040Q15053 153 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 SYT14P1Q58G82 188 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 FGD3Q5JSP0 725 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 GARNL3Q5VVW2 1013 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 OR4A47Q6IF82 309 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 TMPRSS11FQ6ZWK6 438 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 CARM1Q86X55 608 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 AFAP1Q8N556 730 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 CCDC185Q8N715 623 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 OR52B6Q8NGF0 335 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 OR2AJ1Q8NGZ0 328 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 U2AF1L4Q8WU68 220 aaKnown RBP0.84□□□□□ -2.27
CEP290-208ENST00000604024 ESAMQ96AP7 390 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 C2orf48Q96LS8 159 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 MS4A10Q96PG2 267 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 MPHOSPH6Q99547 160 aaKnown RBP0.84□□□□□ -2.27
CEP290-208ENST00000604024 ZMYND12Q9H0C1 365 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 DPP3Q9NY33 737 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 CHKBQ9Y259 395 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 MRPS18CQ9Y3D5 142 aaKnown RBP0.84□□□□□ -2.27
CEP290-208ENST00000604024 CC2D2AQ9P2K1 1620 aa0.84□□□□□ -2.27
CEP290-208ENST00000604024 RRN3P2A6NIE6 340 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 G3V2L1 256 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 ARPC2O15144 300 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 PAPSS1O43252 624 aaPredicted RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 RNASEH2AO75792 299 aaKnown RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 IGHV2-70P01814 119 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 ALOX5P09917 674 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 SAGP10523 405 aaPredicted RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 NR2C1P13056 603 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 CHMP24386 653 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 CNTFP26441 200 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 GPR183P32249 361 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 CASP6P55212 293 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 LMOD3Q0VAK6 560 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 TMEM132DQ14C87 1099 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 KCTD19Q17RG1 926 aaPredicted RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 POM121L1PQ3SYA9 428 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 HIPK1Q86Z02 1210 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 ADGRF2Q8IZF7 708 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 CDK20Q8IZL9 346 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 ARHGAP24Q8N264 748 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 C1orf131Q8NDD1 294 aaKnown RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 ITLN1Q8WWA0 313 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 PIK3R3Q92569 461 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 CMTM3Q96MX0 182 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 FAM218AQ96MZ4 157 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 WDFY2Q96P53 400 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 SEPHS2Q99611 448 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 PNNQ9H307 717 aaKnown RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.84□□□□□ -2.28
CEP290-208ENST00000604024 TAS2R14Q9NYV8 317 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 NOL12Q9UGY1 213 aaKnown RBP eCLIP0.84□□□□□ -2.28
CEP290-208ENST00000604024 HACL1Q9UJ83 578 aa0.84□□□□□ -2.28
CEP290-208ENST00000604024 MRPL11Q9Y3B7 192 aaKnown RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 RSF1Q96T23 1441 aaPredicted RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 BAZ1BQ9UIG0 1483 aaKnown RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 BAZ1AQ9NRL2 1556 aaPredicted RBP0.84□□□□□ -2.28
CEP290-208ENST00000604024 IQSEC2Q5JU85 1478 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ARHGAP23Q9P227 1491 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 LOC105371045A0A1W2PR82 267 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ANKUB1A6NFN9 424 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 A6NLC8 198 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 K7EQG2 157 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 VILLO15195 856 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 INPP4BO15327 924 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 XRCC3O43542 346 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 LRCH4O75427 683 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 WISP3O95389 354 aaPredicted RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 TNFRSF4P43489 277 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ATP4BP51164 291 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 PNLIPRP2P54317 469 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ABCE1P61221 599 aaKnown RBP0.83□□□□□ -2.28
CEP290-208ENST00000604024 GCNT1Q02742 428 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 ACY1Q03154 408 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 BIRC3Q13489 604 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 FAM189A2Q15884 450 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 EXT1Q16394 746 aa0.83□□□□□ -2.28
CEP290-208ENST00000604024 FAM106AQ4KMX7 169 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms