RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TCEAL3Q969E4 200 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 TSACCQ96A04 125 aaPredicted RBP11.66□□□□□ -0.54
USF1-203ENST00000368021 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 EHD1Q9H4M9 534 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 CCDC177Q9NQR7 707 aaPredicted RBP11.66□□□□□ -0.54
USF1-203ENST00000368021 QPCTLQ9NXS2 382 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 PTTG2Q9NZH5 202 aa11.66□□□□□ -0.54
USF1-203ENST00000368021 PNMA8BQ9ULN7 279 aaPredicted RBP11.66□□□□□ -0.54
USF1-203ENST00000368021 CFAP20Q9Y6A4 193 aaKnown RBP11.66□□□□□ -0.54
USF1-203ENST00000368021 SERTM1A2A2V5 107 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 PDZK1P1A8MUH7 402 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 MEI4A8MW99 385 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 PATE3B3GLJ2 98 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 MANBAO00462 879 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 PRAMEF4O60810 478 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 THEGLP0DJG4 465 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 NPPBP16860 134 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 MPLP40238 635 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 HALP42357 657 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 HTR6P50406 440 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 TUBA4AP68366 448 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 HERC3Q15034 1050 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 CPSF6Q16630 551 aaKnown RBP eCLIP11.65□□□□□ -0.54
USF1-203ENST00000368021 ATP6AP1LQ52LC2 224 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 PRAMEF9Q5VWM5 478 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 SPATA19Q7Z5L4 167 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 IQCHQ86VS3 1027 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 OR2T11Q8NH01 316 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 HMGCLL1Q8TB92 370 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 WDR34Q96EX3 536 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 PCBD2Q9H0N5 130 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 C1orf21Q9H246 121 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 PRDM8Q9NQV8 689 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 TDRKHQ9Y2W6 561 aaKnown RBP11.65□□□□□ -0.54
USF1-203ENST00000368021 CCL27Q9Y4X3 112 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 PCM1Q15154 2024 aa11.65□□□□□ -0.54
USF1-203ENST00000368021 E7EQ34 232 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 NPIPB8E9PQR5 432 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 H0YIV9 168 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 SLC28A1O00337 649 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 FFAR3O14843 346 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 LSM1O15116 133 aaKnown RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 GPR42O15529 346 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 RGS14O43566 566 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 KDM1AO60341 852 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 CBFA2T3O75081 653 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 RASGRP1O95267 797 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 TNFP01375 233 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 ALDOCP09972 364 aaKnown RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 THRAP10827 490 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 MTHFD1P11586 935 aaKnown RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 PIK3R1P27986 724 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 NDUFS1P28331 727 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 TRPC1P48995 793 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 BLKP51451 505 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 ERVK-8P63133 956 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 ILF3Q12906 894 aaKnown RBP eCLIP11.65□□□□□ -0.55
USF1-203ENST00000368021 GRIK2Q13002 908 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 PRKG2Q13237 762 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 SF3A2Q15428 464 aaKnown RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 RPE65Q16518 533 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 PDCD4Q53EL6 469 aaKnown RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 XKR6Q5GH73 641 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 C10orf62Q5T681 223 aaPredicted RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 FRG2Q64ET8 278 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 GRHL2Q6ISB3 625 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 LCTLQ6UWM7 567 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 RD3Q7Z3Z2 195 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 HID1Q8IV36 788 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 MFSD2AQ8NA29 543 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 RP9Q8TA86 221 aaKnown RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 NEIL2Q969S2 332 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 KLHDC7BQ96G42 594 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 PPP3R2Q96LZ3 170 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 FRG2BQ96QU4 278 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 FERD3LQ96RJ6 166 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 HAUS8Q9BT25 410 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 TMEM168Q9H0V1 697 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 ELOVL6Q9H5J4 265 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 PARD6AQ9NPB6 346 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 SEMA4GQ9NTN9 838 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 TBC1D29Q9UFV1 150 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 ZNF490Q9ULM2 529 aaPredicted RBP11.65□□□□□ -0.55
USF1-203ENST00000368021 DYRK1BQ9Y463 629 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 SLCO1B1Q9Y6L6 691 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 COLEC10Q9Y6Z7 277 aa11.65□□□□□ -0.55
USF1-203ENST00000368021 RALGAPA1Q6GYQ0 2036 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 A6NCN8 305 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 EPN2O95208 641 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
USF1-203ENST00000368021 PABPC4LP0CB38 370 aaKnown RBP11.64□□□□□ -0.55
USF1-203ENST00000368021 COX4I1P13073 169 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 PORP16435 677 aaPredicted RBP11.64□□□□□ -0.55
USF1-203ENST00000368021 ACTR1BP42025 376 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 RAB28P51157 221 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 ACTR1AP61163 376 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 STX1BP61266 288 aa11.64□□□□□ -0.55
USF1-203ENST00000368021 RACK1P63244 317 aaKnown RBP11.64□□□□□ -0.55
USF1-203ENST00000368021 EIF2B5Q13144 721 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms