RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 E9PAM4 449 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ABCG1P45844 678 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 SYT16Q17RD7 645 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 FKBP1CQ5VVH2 108 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 SLC22A16Q86VW1 577 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 LRRN4CLQ8ND94 238 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 C7orf57Q8NEG2 295 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 LRRC72A6NJI9 287 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PIGZQ86VD9 579 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 CLIP4Q8N3C7 705 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 MIR1-1HGQ9H1L0 117 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NPPAP01160 153 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 HCKP08631 526 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PRPS1L1P21108 318 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 FMO3P31513 532 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NRG1Q02297 640 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ZACNQ401N2 412 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 RGMAQ96B86 450 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 VNN2O95498 520 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PLGP00747 810 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ERCC1P07992 297 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 CCDC58Q4VC31 144 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ARSJQ5FYB0 599 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ACER1Q8TDN7 264 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 JSRP1Q96MG2 331 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 GAL3ST4Q96RP7 486 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 CORO1BQ9BR76 489 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PTPRZ1P23471 2315 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 A0A1W2PRQ8 180 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NPIPA5E9PKD4 350 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 MT-ND5P03915 603 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 AHCYP23526 432 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NUMBP49757 651 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 LRRC55Q6ZSA7 311 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TMED4Q7Z7H5 227 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ASCC1Q8N9N2 400 aaKnown RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 LRRC58Q96CX6 371 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PCDHB18PQ96TA0 734 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 SULT4A1Q9BR01 284 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 FAIMQ9NVQ4 179 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NPIPA1Q9UND3 350 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 E2F3O00716 465 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ITGA5P08648 1049 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PBX3P40426 434 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 HSPB3Q12988 150 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 HID1Q8IV36 788 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PDHXO00330 501 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 HTR1AP08908 422 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 IL7P13232 177 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 CELF3Q5SZQ8 465 aaKnown RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 LCN9Q8WX39 176 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 UPF1Q92900 1129 aaKnown RBP eCLIP8.18□□□□□ -1.11e-9■■■■□ 25.6
HSPG2-203ENST00000374695 MALSU1Q96EH3 234 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 MTMR9Q96QG7 549 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 STXBP5LQ9Y2K9 1186 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 DOCK7Q96N67 2140 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 OR12D2P58182 307 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 FSTL4Q6MZW2 842 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NUDT13Q86X67 352 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ZNF514Q96K75 400 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 SNX27Q96L92 541 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 GPR21Q99679 349 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 HERC2P3Q9BVR0 1158 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 MON2Q7Z3U7 1717 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NEDD8-MDP1E9PL57 170 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 SLITRK5O94991 958 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ALPPL2P10696 532 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 CFL1P23528 166 aaKnown RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TMEM199Q8N511 208 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 COL21A1Q96P44 957 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TCAF1Q9Y4C2 921 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TEX13DA0A0J9YY54 714 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 A8MUI8 341 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NFATC1O95644 943 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ARL13AQ5H913 290 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ARL14Q8N4G2 192 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ADAM2Q99965 735 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TBL1XR1Q9BZK7 514 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 KATNBL1Q9H079 304 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NDUFAF4Q9P032 175 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PACSIN3Q9UKS6 424 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 CNTN6Q9UQ52 1028 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TLR6Q9Y2C9 796 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 DIP2CQ9Y2E4 1556 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 BANF1O75531 89 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ALAS2P22557 587 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TAF1AQ15573 450 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-203ENST00000374695 NTRK3Q16288 839 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 IQCHQ86VS3 1027 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 OR56A1Q8NGH5 318 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 P2RY11Q96G91 374 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 PDCD2LQ9BRP1 358 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 COQ10BQ9H8M1 238 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 SDHAF3Q9NRP4 125 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 ADGRB2O60241 1585 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 LOC100509620A0A075B734 347 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 IFNA17P01571 189 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 VAMP1P23763 118 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 IDH3AP50213 366 aa8.18□□□□□ -1.1
HSPG2-203ENST00000374695 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms