RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 RPL10LQ96L21 214 aaKnown RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 SMURF1Q9HCE7 757 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CMAHPQ9Y471 501 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 PCDHA3Q9Y5H8 950 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 H3BN98 237 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 YY2O15391 372 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 BNIP3LO60238 219 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 GADD45GO95257 159 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 POLBP06746 335 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ACADMP11310 421 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 RFC2P35250 354 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 RPL14P50914 215 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 NUDT6P53370 316 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 PTPRRQ15256 657 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TMEM44Q2T9K0 475 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CACUL1Q86Y37 369 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CRYBG2Q8N1P7 616 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 BANPQ8N9N5 519 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 SLC13A3Q8WWT9 602 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 C1GALT1C1Q96EU7 318 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 C14orf79Q96F83 325 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.79□□□□□ -15e-7■■■■■ 39.7
GTF2A1-203ENST00000553612 ZNF358Q9NW07 568 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 PTCH2Q9Y6C5 1203 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 BET1O15155 118 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 DHX15O43143 795 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 AOC1P19801 751 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 RAB6AP20340 208 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 MYF6P23409 242 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ACSL1P33121 698 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CCR10P46092 362 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CLCN4P51793 760 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 SPP2Q13103 211 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 NAE1Q13564 534 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 COL28A1Q2UY09 1125 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TMEM31Q5JXX7 168 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 USP45Q70EL2 814 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 EXTL1Q92935 676 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TMEM41AQ96HV5 264 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 EGLN2Q96KS0 407 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 RNF32Q9H0A6 362 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 SIK2Q9H0K1 926 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 SPACA1Q9HBV2 294 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TLR8Q9NR97 1041 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 FAM212BQ9NTI7 297 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 ASNSD1Q9NWL6 643 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 MTMR10Q9NXD2 777 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 GSKIPQ9P0R6 139 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 NDRG3Q9UGV2 375 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 NOCTQ9UK39 431 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 LIPT1Q9Y234 373 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TCRBV16S1A1N1A0A5B0 115 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ARPC5O15511 151 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 PAPSS1O43252 624 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 PIGRP01833 764 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TMIGD3P0DMS9 266 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 BMP1P13497 986 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 FECHP22830 423 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ADORA2AP29274 412 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 SDC2P34741 201 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 RAD52P43351 418 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ERV3-1Q14264 604 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CBWD6Q4V339 395 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CBWD3Q5JTY5 395 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CBWD5Q5RIA9 395 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ZBTB37Q5TC79 503 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ADGRD1Q6QNK2 874 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TTLL10Q6ZVT0 673 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 BEST4Q8NFU0 473 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 FEZF2Q8TBJ5 459 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ZUFSPQ96AP4 578 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 PIWIL1Q96J94 861 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 ZDHHC15Q96MV8 337 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 QRFPRQ96P65 431 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 LGMNQ99538 433 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CCDC86Q9H6F5 360 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 TMEM181Q9P2C4 612 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 CTSFQ9UBX1 484 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 GTF2IRD1Q9UHL9 959 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 PLLPQ9Y342 182 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 LOC105369274A0A096LPK9 316 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 A0A0X1KG70 313 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 A0A1B0GTQ1 180 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 AGXTP21549 392 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 RIDAP52758 137 aaKnown RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 HUNKP57058 714 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TAS2R60P59551 318 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 TFDP3Q5H9I0 405 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 GLCCI1Q86VQ1 547 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ENTHD1Q8IYW4 607 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 OR4N4Q8N0Y3 316 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 LILRA2Q8N149 483 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 OR52B2Q96RD2 323 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 DPYSL5Q9BPU6 564 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ZNF471Q9BX82 626 aaPredicted RBP8.79□□□□□ -1
GTF2A1-203ENST00000553612 CLASP1Q7Z460 1538 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ARAP3Q8WWN8 1544 aa8.79□□□□□ -1
GTF2A1-203ENST00000553612 ATP8B3O60423 1300 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms