RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 HPS1Q92902 700 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 ECHDC3Q96DC8 303 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 MED8Q96G25 268 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 MYOCQ99972 504 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 TCF25Q9BQ70 676 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 RIOK2Q9BVS4 552 aaKnown RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 CEP290O15078 2479 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 ARNTLO00327 626 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CLPXO76031 633 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CTSLP07711 333 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 EBLN1P0CF75 366 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 SDC1P18827 310 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CAPGP40121 348 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 RPS14P62263 151 aaKnown RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 GRSF1Q12849 480 aaKnown RBP eCLIP14.35□□□□□ -0.11
DDX55-209ENST00000542286 FOXD4Q12950 439 aaPredicted RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 KCNJ8Q15842 424 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 TTLL9Q3SXZ7 439 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 AASDHQ4L235 1098 aaPredicted RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 LDLRAP1Q5SW96 308 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 SPESP1Q6UW49 350 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CADM3Q8N126 398 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 FRS2Q8WU20 508 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 PAWRQ96IZ0 340 aaKnown RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 DPH2Q9BQC3 489 aaPredicted RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 NTMT1Q9BV86 223 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 SLC32A1Q9H598 525 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CLMPQ9H6B4 373 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 SERHLQ9NQF3 203 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 CXXC1Q9P0U4 656 aaPredicted RBP14.35□□□□□ -0.11
DDX55-209ENST00000542286 MAGEL2Q9UJ55 1249 aa14.35□□□□□ -0.11
DDX55-209ENST00000542286 AGAP14A8MT82 685 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 CXCR6O00574 342 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 CST1P01037 141 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 EEF1B2P24534 225 aaKnown RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 BDKRB1P46663 353 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 ARSFP54793 590 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 CHRNB3Q05901 458 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 GRIN2CQ14957 1233 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 TRIM46Q7Z4K8 759 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 BTLAQ7Z6A9 289 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 USP7Q93009 1102 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 WRAP53Q9BUR4 548 aaKnown RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 CFHR5Q9BXR6 569 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 TPK1Q9H3S4 243 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SGTAO43765 313 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 SERPINA1P01009 418 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 GNRH1P01148 92 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 GBAP04062 536 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 CLTBP09497 229 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 ATP1B2P14415 290 aaPredicted RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 NR4A1P22736 598 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 PDHA2P29803 388 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 MRPL19P49406 292 aaKnown RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 CHIT1Q13231 466 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 TCEAL5Q5H9L2 206 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 PERM1Q5SV97 790 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 PROSER1Q86XN7 944 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SFTPA1Q8IWL2 248 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 PAPD5Q8NDF8 572 aaKnown RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 ASB11Q8WXH4 323 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SAMD11Q96NU1 681 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 ALPK1Q96QP1 1244 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 MROQ9BYG7 248 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 PCDH12Q9NPG4 1184 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SPEGQ15772 3267 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 TRIOO75962 3097 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SLC28A1O00337 649 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 GNGT2O14610 69 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 PER2O15055 1255 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 AXIN1O15169 862 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 YY2O15391 372 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 TSPAN6O43657 245 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 MOSPD3O75425 235 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 OR56A5P0C7T3 313 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 TMBIM6P55061 237 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 IL1RL1Q01638 556 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 PON2Q15165 354 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 LILRA6Q6PI73 481 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 GDPD4Q6W3E5 623 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 CYP2U1Q7Z449 544 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 CLECL1Q8IZS7 167 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 OR13F1Q8NGS4 319 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SLC47A1Q96FL8 570 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 BDH2Q9BUT1 245 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 ADNPQ9H2P0 1102 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 TOR3AQ9H497 397 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 VNN3Q9NY84 501 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SCHIP1Q9P0W5 487 aaPredicted RBP14.34□□□□□ -0.11
DDX55-209ENST00000542286 TRPS1Q9UHF7 1281 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 SLC25A13Q9UJS0 675 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 BTBD3Q9Y2F9 522 aa14.34□□□□□ -0.11
DDX55-209ENST00000542286 ELOVL7A1L3X0 281 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 E7EQ34 232 aa14.33□□□□□ -0.12
DDX55-209ENST00000542286 MITFO75030 526 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms