RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 CCNL2Q96S94 520 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 IL12RB2Q99665 862 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TREX2Q9BQ50 279 aaPredicted RBP5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CCDC3Q9BQI4 270 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CRACR2AQ9BSW2 395 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 LRRC61Q9BV99 259 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 PTDSS2Q9BVG9 487 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TKTL2Q9H0I9 626 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 ZDHHC6Q9H6R6 413 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 EPB41L5Q9HCM4 733 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 KRT84Q9NSB2 600 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 NCKIPSDQ9NZQ3 722 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 MAN1B1Q9UKM7 699 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 GPR34Q9UPC5 381 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 CSNK1G3Q9Y6M4 447 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 FLNCQ14315 2725 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 AHCTF1Q8WYP5 2266 aa5.41□□□□□ -1.54
HNRNPC-233ENST00000557768 TLN1Q9Y490 2541 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 COL12A1Q99715 3063 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 BSNQ9UPA5 3926 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 CCDC187A0A096LP49 1063 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 C16orf96A6NNT2 1141 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 YY2O15391 372 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 DAB1O75553 588 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ZMPSTE24O75844 475 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 AFPP02771 609 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 GCSHP23434 173 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 RAD52P43351 418 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 POLD2P49005 469 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 SULT1E1P49888 294 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 SERPINH1P50454 418 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 CSRP3P50461 194 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 THOP1P52888 689 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 DRG2P55039 364 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 PFN3P60673 137 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ARF5P84085 180 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 E2F2Q14209 437 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 PTPN20Q4JDL3 420 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 CARD16Q5EG05 197 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 LRRC73Q5JTD7 316 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ZNF569Q5MCW4 686 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 FAM205BPQ63HN1 556 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 LRRC31Q6UY01 552 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 LEKR1Q6ZMV7 388 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 SETD3Q86TU7 594 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 VPS36Q86VN1 386 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 SLC15A3Q8IY34 581 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 FSTL5Q8N475 847 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 RYBPQ8N488 228 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 MBD3L2Q8NHZ7 208 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ADAMTS15Q8TE58 950 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ZDHHC12Q96GR4 267 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 LENG8Q96PV6 779 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 SERINC2Q96SA4 455 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 NPY6RQ99463 290 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 TM6SF2Q9BZW4 377 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 CLPBQ9H078 707 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ZNF768Q9H5H4 540 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 SYNCQ9H7C4 482 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ASNSD1Q9NWL6 643 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 ARHGEF38Q9NXL2 777 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 VSX1Q9NZR4 365 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 SPASTQ9UBP0 616 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 APOBEC3BQ9UH17 382 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 IL17BQ9UHF5 180 aa5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 NDRG4Q9ULP0 352 aaKnown RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 HEMK1Q9Y5R4 338 aaPredicted RBP5.4□□□□□ -1.54
HNRNPC-233ENST00000557768 IGLV3-10A0A075B6K4 115 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 ILVBLA1L0T0 632 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 GOLGA6L4A6NEF3 574 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 LMO7DNF2Z398 122 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 NTN3O00634 580 aaPredicted RBP5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 TOR1BO14657 336 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 RPLP0P05388 317 aaKnown RBP5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 UGT2B4P06133 528 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 PNMA6AP0CW24 399 aaPredicted RBP5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 ITGB6P18564 788 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 PTGS2P35354 604 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 UGT1A5P35504 534 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 PGM1P36871 562 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 CCR9P51686 369 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 CYP4F2P78329 520 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 CCL7P80098 99 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 GNA12Q03113 381 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 DEUP1Q05D60 604 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 SRSF1Q07955 248 aaKnown RBP eCLIP5.39□□□□□ -1.551e-8■■■□□ 14.8
HNRNPC-233ENST00000557768 GALNT2Q10471 571 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 SF3A3Q12874 501 aaKnown RBP eCLIP5.39□□□□□ -1.551e-41■■■■□ 19.7
HNRNPC-233ENST00000557768 MTA1Q13330 715 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 CCNIQ14094 377 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 ZNF805Q5CZA5 627 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 BRMS1LQ5PSV4 323 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 ICE2Q659A1 982 aa5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 RGS7BPQ6MZT1 257 aaPredicted RBP5.39□□□□□ -1.55
HNRNPC-233ENST00000557768 TRNP1Q6NT89 227 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms