RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ACSM4P0C7M7 580 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GCAP28676 217 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 IL6STP40189 918 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 GRIA4P48058 902 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MASP1P48740 699 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 CDH11P55287 796 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PEA15Q15121 130 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GPR19Q15760 415 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 VMACQ2NL98 169 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SH3PXD2AQ5TCZ1 1133 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SPOCD1Q6ZMY3 1216 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 SLC41A1Q8IVJ1 513 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 ACBD4Q8NC06 268 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 OR14K1Q8NGZ2 314 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GALNT9Q9HCQ5 603 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 ZMYM5Q9UJ78 669 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MRTO4Q9UKD2 239 aaKnown RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 FANCAO15360 1455 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 LOC102723532A0A0G2JNH3 316 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 ZNF705FA8MVS1 300 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 TISP43B9A030 160 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 BPGMP07738 259 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 ZNF705DP0CH99 300 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 ZNF705BP0CI00 300 aaPredicted RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 AP1S2P56377 157 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 OR2B8PP59922 312 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 GAD2Q05329 585 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 RBMS2Q15434 407 aaKnown RBP8.81□□□□□ -1
GTF2A1-203ENST00000553612 PRAMEF19Q5SWL8 479 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PODNQ7Z5L7 613 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 FAM124AQ86V42 546 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 MCPH1Q8NEM0 835 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 OR2T35Q8NGX2 323 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 PPP3R2Q96LZ3 170 aa8.81□□□□□ -1
GTF2A1-203ENST00000553612 A0A096LPK6 155 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 A0A1W2PQ09 198 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 GSG1L2A8MUP6 293 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 PCDH17O14917 1159 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CA5AP35218 305 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 GMPRP36959 345 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 PPT1P50897 306 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 FABP9Q0Z7S8 132 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 FADDQ13158 208 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 C1DQ13901 141 aaKnown RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 RBM39Q14498 530 aaKnown RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 PUM1Q14671 1186 aaKnown RBP eCLIP8.8□□□□□ -1
GTF2A1-203ENST00000553612 LTB4RQ15722 352 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CATSPEREQ5SY80 951 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 DCAF12L1Q5VU92 463 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 FAM35AQ86V20 835 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 TPRA1Q86W33 373 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 RDH11Q8TC12 318 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SPPL2AQ8TCT8 520 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 LRRC4Q9HBW1 653 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 ANKHQ9HCJ1 492 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CD320Q9NPF0 282 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 ACOXLQ9NUZ1 547 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CFAP43Q8NDM7 1665 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 AQP7O14520 342 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CD3EAPO15446 510 aaKnown RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 PMPCBO75439 489 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SNRPB2P08579 225 aaKnown RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 RORCP51449 518 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CCR4P51679 360 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 GTF2A2P52657 109 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 MS4A2Q01362 244 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 DHCR24Q15392 516 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 VPS26BQ4G0F5 336 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 FNDC3BQ53EP0 1204 aaKnown RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 NCMAPQ5T1S8 102 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 NSMAFQ92636 917 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 ITPAQ9BY32 194 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SPNS1Q9H2V7 528 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SALL3Q9BXA9 1300 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 TCRBV9S1A1TA0A576 114 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 ANKDD1BA6NHY2 528 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SMIM22K7EJ46 135 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 PEX12O00623 359 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 MICAL2O94851 1124 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 PAK4O96013 591 aaPredicted RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 TAL1P17542 331 aaPredicted RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 RXRBP28702 533 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 VEGFCP49767 419 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CREMQ03060 361 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 MEDAGQ5VYS4 303 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 REP15Q6BDI9 236 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 LINGO2Q7L985 606 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 TSPAN17Q96FV3 270 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 ANKRD60Q9BZ19 345 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SLC6A16Q9GZN6 736 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 MFFQ9GZY8 342 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SMURF2Q9HAU4 748 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 NPAP1Q9NZP6 1156 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 CA14Q9ULX7 337 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 PAPSS2O95340 614 aaPredicted RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 ITGA1P56199 1179 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 FRG1Q14331 258 aaKnown RBP8.8□□□□□ -1
GTF2A1-203ENST00000553612 TDRPQ86YL5 185 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 EEF1AKMT1Q8WVE0 214 aa8.8□□□□□ -1
GTF2A1-203ENST00000553612 SLAMF9Q96A28 289 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms