RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FAM174BQ3ZCQ3 159 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 TMEM164Q5U3C3 297 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 CARD17Q5XLA6 110 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 POP5Q969H6 163 aaKnown RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 FANCFQ9NPI8 374 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 DISC1C4P0D8 188 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 NDUFS4O43181 175 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 NFKB2Q00653 900 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 OR6Q1Q8NGQ2 317 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 FRZBQ92765 325 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 GPR75-ASB3A0A0A6YYF3 556 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 INPPL1O15357 1258 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 RAD51DO75771 328 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 LGALS2P05162 132 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 TUSC3Q13454 348 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 PGM2L1Q6PCE3 622 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 DNM1P34Q6PK57 102 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 SDHAF3Q9NRP4 125 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ARGFXA6NJG6 315 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF99A8MXY4 864 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ZBTB48P10074 688 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 AUHQ13825 339 aaKnown RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 GRM3Q14832 879 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 MLC1Q15049 377 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ELMOD2Q8IZ81 293 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 TMEM125Q96AQ2 219 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ZBED6CLQ96FA7 236 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 MKLN1Q9UL63 735 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 SALL1Q9NSC2 1324 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 VILLO15195 856 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 IFNA4P05014 189 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 CHRFAM7AQ494W8 412 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 IFI44LQ53G44 452 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 KIF18BQ86Y91 864 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 DTX3Q8N9I9 347 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ZSCAN1Q8NBB4 408 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 ICKQ9UPZ9 632 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 PCDHB1Q9Y5F3 818 aa16.06■□□□□ 0.16
PTCH1-201ENST00000331920 PCYT1BQ9Y5K3 369 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-201ENST00000331920 MANSC4A6NHS7 340 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 H7C417 338 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CCL22O00626 93 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 SLITRK3O94933 977 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 YES1P07947 543 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ADH7P40394 386 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 TMIEQ8NEW7 156 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CXorf21Q9HAI6 301 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 PRDM16Q9HAZ2 1276 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 HMGXB4Q9UGU5 601 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CROCCQ5TZA2 2017 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 MAPTP10636 758 aaKnown RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 IRF2P14316 349 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 TOB1P50616 345 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 MAP2K5Q13163 448 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CDCA5Q96FF9 252 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 OR2S2Q9NQN1 319 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ADM5C9JUS6 153 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CYP11A1P05108 521 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ANXA3P12429 323 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 RNF144AP50876 292 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CACNG1Q06432 222 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 HERC3Q15034 1050 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ZER1Q7Z7L7 766 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 S100A16Q96FQ6 103 aaKnown RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 HERC2P3Q9BVR0 1158 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 DNAJC28Q9NX36 388 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ADAM18Q9Y3Q7 739 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 MYO9BQ13459 2157 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 NFATC4Q14934 902 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 FAM83HQ6ZRV2 1179 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 LCHNA4D1U4 455 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 PROM1O43490 865 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 TM7SF2O76062 418 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 HRGP04196 525 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ERBB2P04626 1255 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CCND3P30281 292 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CRISP1P54107 249 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 GNA12Q03113 381 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 SCARB2Q14108 478 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 PAOXQ6QHF9 649 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 PNPLA2Q96AD5 504 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CASC3O15234 703 aaKnown RBP16.05■□□□□ 0.16
PTCH1-201ENST00000331920 TMEM11P17152 192 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 SLC9A3P48764 834 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 TNFRSF10DQ9UBN6 386 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF521Q96K83 1311 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF670-ZNF695F2Z2N8 137 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CDC7O00311 574 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 RNF13O43567 381 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 TSHRP16473 764 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ZNF616Q08AN1 781 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
PTCH1-201ENST00000331920 ADGRL3Q9HAR2 1447 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 PET100P0DJ07 73 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 RPL7AP62424 266 aaKnown RBP16.04■□□□□ 0.16
PTCH1-201ENST00000331920 PGM2Q96G03 612 aa16.04■□□□□ 0.16
PTCH1-201ENST00000331920 ATG5Q9H1Y0 275 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms