RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 NFATC4Q14934 902 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 NET1Q7Z628 596 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 LRTM1Q9HBL6 345 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 TRAF6Q9Y4K3 522 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 A0A0A6YYH2 397 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 METTL21EPA6NDL7 271 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 A6NJ64 397 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 GLOD5A6NK44 160 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 HEXBP07686 556 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 TACR2P21452 398 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 SDC2P34741 201 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF676Q8N7Q3 588 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 OR6Q1Q8NGQ2 317 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 TEFMQ96QE5 360 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 CPXM1Q96SM3 734 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 IRS2Q9Y4H2 1338 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 VSTM5A8MXK1 200 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 H0YGN5 161 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 WNT7AO00755 349 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 PRAMEF1O95521 474 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 DHFRP00374 187 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 GRM5P41594 1212 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF542PQ5EBM4 170 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 XYLT1Q86Y38 959 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 PIGXQ8TBF5 258 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 PYCR2Q96C36 320 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 PCDHB3Q9Y5E6 796 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 ZMYM2Q9UBW7 1377 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 KCNU1A8MYU2 1149 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 SFTPBP07988 381 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 KELP23276 732 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 CTHP32929 405 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 BICRALQ6AI39 1079 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF557Q8N988 423 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 FAM156AQ8NDB6 213 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 AGAP11Q8TF27 550 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 HDAC2Q92769 488 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 L2HGDHQ9H9P8 463 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 MTRRQ9UBK8 725 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 FBXO5Q9UKT4 447 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 CD83Q01151 205 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 BLMHQ13867 455 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 UPF1Q92900 1129 aaKnown RBP eCLIP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 HSFY1Q96LI6 401 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 NDC1Q9BTX1 674 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 LMO2P25791 158 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 AUHQ13825 339 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 ATAD3CQ5T2N8 411 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 ARPINQ7Z6K5 226 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 MON1AQ86VX9 555 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 GTF2IRD1Q9UHL9 959 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 GLS2Q9UI32 602 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 FOXK1P85037 733 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 TAS1R3Q7RTX0 852 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 PHOSPHO1Q8TCT1 267 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 CLEC4CQ8WTT0 213 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 BSNDQ8WZ55 320 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 GPR20Q99678 358 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF670Q9BS34 389 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 UPB1Q9UBR1 384 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 FBXO9Q9UK97 447 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 GOT2P00505 430 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 NMBRP28336 390 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 PRKAR1BP31321 381 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 PTDSS1P48651 473 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 POLR2JP52435 117 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 ANKRD26P1Q6NSI1 321 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF550Q7Z398 422 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF180Q9UJW8 692 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 PCDHGC5Q9Y5F6 944 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 ITGB5P18084 799 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 CDK9P50750 372 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 PRKCZQ05513 592 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 TUBB3Q13509 450 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 KHDC1LQ5JSQ8 128 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 TWIST2Q8WVJ9 160 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 CLP1Q92989 425 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 NDUFA13Q9P0J0 144 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 GNG13Q9P2W3 67 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 PCDHA2Q9Y5H9 948 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 SEC14L5O43304 696 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 UBXN7O94888 489 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 RBM48Q5RL73 367 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 KBTBD8Q8NFY9 601 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 SPATA6Q9NWH7 488 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 EURLQ9NYK6 297 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 PCYOX1Q9UHG3 505 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 RAP2CQ9Y3L5 183 aa16.65■□□□□ 0.26
CACNA1A-253ENST00000637927 TM7SF2O76062 418 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 ACTR1BP42025 376 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 RHBDL3P58872 404 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 ACTR1AP61163 376 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 SGCAQ16586 387 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 SDSLQ96GA7 329 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 DAPL1A0PJW8 107 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 PRR5-ARHGAP8B1AHC4 643 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 RLN2P04090 185 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 INHAP05111 366 aa16.64■□□□□ 0.25
CACNA1A-253ENST00000637927 SPATA31C1P0DKV0 1188 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms