RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 SEMA3DO95025 777 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 TRIM16O95361 564 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 ALOX12P18054 663 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 TAGLNQ01995 201 aaKnown RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 PLD1Q13393 1074 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 FBXL6Q8N531 539 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 EEF1AKMT1Q8WVE0 214 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 RNF170Q96K19 258 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 REXO4Q9GZR2 422 aaKnown RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 MRM3Q9HC36 420 aaKnown RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 ACOXLQ9NUZ1 547 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 SLC1A7O00341 560 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 INSIG1O15503 277 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 COCHO43405 550 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 NDUFS3O75489 264 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 GUCA1CO95843 209 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 CORO1AP31146 461 aaKnown RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 HERVK_113P63132 956 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 POU6F2P78424 691 aaPredicted RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 RNF219Q5W0B1 726 aaPredicted RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 TTC23Q5W5X9 447 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 PLD3Q8IV08 490 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 HID1Q8IV36 788 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 OR10Q1Q8NGQ4 319 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 PMEPA1Q969W9 287 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 TSPAN17Q96FV3 270 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 ERVK-6Q9BXR3 956 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 AMBRA1Q9C0C7 1298 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 FAM118AQ9NWS6 357 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 U3KQV3 271 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 IGLV3-10A0A075B6K4 115 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 CCDC154A6NI56 674 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 ECI2O75521 394 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 RPP40O75818 363 aaKnown RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 HRH2P25021 359 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 MRNIPQ6NTE8 343 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 ERAP2Q6P179 960 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 BEND5Q7L4P6 421 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 CLYBLQ8N0X4 340 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 CARNMT1Q8N4J0 409 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 CLDN19Q8N6F1 224 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 TEX26Q8N6G2 289 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 RAET1EQ8TD07 263 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 TMEM125Q96AQ2 219 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 CASD1Q96PB1 797 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 WBP11Q9Y2W2 641 aaKnown RBP16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 COMMD10Q9Y6G5 202 aa16.9■□□□□ 0.3
LDLRAP1-201ENST00000374338 WASH4PA8MWX3 477 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 TRIM77I1YAP6 450 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 UPK1AO00322 258 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 PRLP01236 227 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 AP2S1P53680 142 aaPredicted RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 DNAJB13P59910 316 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 EIF2B5Q13144 721 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 TARDBPQ13148 414 aaKnown RBP eCLIP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 KRR1Q13601 381 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 LAPTM4AQ15012 233 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 LRRC73Q5JTD7 316 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 LRRC8DQ7L1W4 858 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 MINDY1Q8N5J2 469 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 FBXO22Q8NEZ5 403 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 ANKHQ9HCJ1 492 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 PCDHB9Q9Y5E1 797 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 PCDHA9Q9Y5H5 950 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 KRT87PA6NCN2 255 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 ASPDHA6ND91 283 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 EOMESO95936 686 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 FDXRP22570 491 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 MC4RP32245 332 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 ATP5C1P36542 298 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 KPNA2P52292 529 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 STC1P52823 247 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 SREBF2Q12772 1141 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 IRF5Q13568 498 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 ACOX1Q15067 660 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 TYSND1Q2T9J0 566 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 PNCKQ6P2M8 343 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 PRMT9Q6P2P2 845 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 CDYL2Q8N8U2 506 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 OR52B6Q8NGF0 335 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 AURKBQ96GD4 344 aaPredicted RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 FUBP3Q96I24 572 aaKnown RBP eCLIP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 MAT2BQ9NZL9 334 aa16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 EIF2B4Q9UI10 523 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 OAS3Q9Y6K5 1087 aaKnown RBP16.89■□□□□ 0.29
LDLRAP1-201ENST00000374338 AZIN1O14977 448 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 ACSL4O60488 711 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 APOA1P02647 267 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 GALTP07902 379 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 SP3Q02447 781 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 RBBP7Q16576 425 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 ZNF404Q494X3 552 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 FBXO39Q8N4B4 442 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 PARP16Q8N5Y8 322 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 KIAA1958Q8N8K9 716 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 GALNT6Q8NCL4 622 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 FRS2Q8WU20 508 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 MMP27Q9H306 513 aa16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 CARS2Q9HA77 564 aaKnown RBP16.88■□□□□ 0.29
LDLRAP1-201ENST00000374338 FBXO10Q9UK96 956 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms