RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SNX27Q96L92 541 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 HIST1H2AJQ99878 128 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 H2AFJQ9BTM1 129 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 TUBB1Q9H4B7 451 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 ITM2BQ9Y287 266 aa8.64□□□□□ -1.03
RTN4-206ENST00000394611 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 TCRBV3S1A0A5B6 114 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 FAM92AA1XBS5 289 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 NT5C1B-RDH14C9J2C7 533 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 INHAP05111 366 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 SPNP16150 400 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CHI3L1P36222 383 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 INO80DQ53TQ3 878 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 SYVN1Q86TM6 617 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 AMIGO1Q86WK6 493 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CCDC117Q8IWD4 279 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 ZNF420Q8TAQ5 688 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 FAM45AQ8TCE6 357 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 PIH1D2Q8WWB5 315 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 FBXO32Q969P5 355 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 FYTTD1Q96QD9 318 aaKnown RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 TMEM209Q96SK2 561 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CSF3RQ99062 836 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 TTTY10Q9BZA0 68 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 SPRTNQ9H040 489 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 TRIM45Q9H8W5 580 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 TMEM181Q9P2C4 612 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 NFASCO94856 1347 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 C5orf58C9J3I9 102 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 PRR23D1E9PI22 279 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 F8W810 466 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 F9P00740 461 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 THP07101 528 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 C8BP07358 591 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 PRR23D2P0DMB1 279 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 CYBAP13498 195 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 PBX3P40426 434 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 TBX4P57082 545 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 IL18Q14116 193 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 ANGPT1Q15389 498 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 ATP6AP1Q15904 470 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 SNAPC1Q16533 368 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 BCL7AQ4VC05 210 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 RFTN2Q52LD8 501 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 TMPRSS11AQ6ZMR5 421 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 ZDHHC17Q8IUH5 632 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 HID1Q8IV36 788 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 THEM5Q8N1Q8 247 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 TMEM132CQ8N3T6 1108 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CARNMT1Q8N4J0 409 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 ZSCAN5AQ9BUG6 496 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 SLC2A11Q9BYW1 496 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 FZD8Q9H461 694 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 A0A1W2PQH9 124 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 PSMD3O43242 534 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 ALDH1A2O94788 518 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CRHBPP24387 322 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 GPR15P49685 360 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 TMBIM6P55061 237 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CAV3P56539 151 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CSNK2BP67870 215 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 CDK18Q07002 472 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 STARD3Q14849 445 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 QPRTQ15274 297 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 PCBP2Q15366 365 aaKnown RBP eCLIP8.63□□□□□ -1.039e-21■■□□□ 12.6
RTN4-206ENST00000394611 C6orf136Q5SQH8 315 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 MSANTD2Q6P1R3 559 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 MTFR2Q6P444 385 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 PTCHD4Q6ZW05 846 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 USP43Q70EL4 1123 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 RRM2BQ7LG56 351 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 NRARPQ7Z6K4 114 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 RBM23Q86U06 439 aaKnown RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 SLC22A17Q8WUG5 538 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 TCF25Q9BQ70 676 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 TTPALQ9BTX7 342 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 GSTO2Q9H4Y5 243 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 ATP13A1Q9HD20 1204 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 RANGRFQ9HD47 186 aaPredicted RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 SCUBE2Q9NQ36 999 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 RAD18Q9NS91 495 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 MKS1Q9NXB0 559 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 RNF6Q9Y252 685 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 ZFC3H1O60293 1989 aaKnown RBP8.63□□□□□ -1.03
RTN4-206ENST00000394611 RP1P56715 2156 aa8.63□□□□□ -1.03
RTN4-206ENST00000394611 MGAT4DA6NG13 374 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 MYL12BO14950 172 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SBK3P0C264 359 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 PCSK1P29120 753 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 DAOAP59103 153 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SELENBP1Q13228 472 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 SEMA3AQ14563 771 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 CTU2Q2VPK5 515 aaKnown RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 BTBD16Q32M84 506 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 ISCA2Q86U28 154 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 TMEM151AQ8N4L1 468 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 CHDHQ8NE62 594 aaPredicted RBP8.62□□□□□ -1.03
RTN4-206ENST00000394611 OR4F6Q8NGB9 312 aa8.62□□□□□ -1.03
RTN4-206ENST00000394611 LRRC20Q8TCA0 184 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms