RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W CTR9P89105 1077 aa2.49□□□□□ -2.01
CTF4YPR135W YVH1Q02256 364 aaKnown RBP2.49□□□□□ -2.01
CTF4YPR135W BUD21Q08492 214 aaPredicted RBP2.49□□□□□ -2.01
CTF4YPR135W YIG1Q08956 461 aa2.49□□□□□ -2.01
CTF4YPR135W YVC1Q12324 675 aa2.49□□□□□ -2.01
CTF4YPR135W YLR278CQ05854 1341 aa2.48□□□□□ -2.01
CTF4YPR135W RIM15P43565 1770 aa2.48□□□□□ -2.01
CTF4YPR135W COBP00163 385 aa2.48□□□□□ -2.01
CTF4YPR135W PTC7P38797 343 aa2.48□□□□□ -2.01
CTF4YPR135W PEX7P39108 375 aa2.48□□□□□ -2.01
CTF4YPR135W YDL177CQ12257 170 aa2.48□□□□□ -2.01
CTF4YPR135W LSO1Q3E827 93 aa2.48□□□□□ -2.01
CTF4YPR135W HTS1P07263 546 aaKnown RBP2.48□□□□□ -2.01
CTF4YPR135W PRP5P21372 849 aaPredicted RBP2.48□□□□□ -2.01
CTF4YPR135W ORC3P54790 616 aa2.48□□□□□ -2.01
CTF4YPR135W REI1P38344 393 aaPredicted RBP2.47□□□□□ -2.01
CTF4YPR135W SAP155P43612 1002 aa2.47□□□□□ -2.01
CTF4YPR135W MRPL22P53881 309 aa2.47□□□□□ -2.01
CTF4YPR135W KIN4Q01919 800 aa2.47□□□□□ -2.01
CTF4YPR135W NPR1P22211 790 aa2.47□□□□□ -2.01
CTF4YPR135W NFS1P25374 497 aa2.47□□□□□ -2.01
CTF4YPR135W GTS1P40956 396 aa2.47□□□□□ -2.01
CTF4YPR135W ELA1P53861 379 aaPredicted RBP2.47□□□□□ -2.01
CTF4YPR135W MEC3Q02574 474 aa2.47□□□□□ -2.01
CTF4YPR135W CMR1Q12510 522 aaKnown RBP2.47□□□□□ -2.01
CTF4YPR135W DUR3P33413 735 aa2.46□□□□□ -2.02
CTF4YPR135W RIM8P53179 542 aa2.46□□□□□ -2.02
CTF4YPR135W NOB1Q08444 459 aaKnown RBP2.46□□□□□ -2.02
CTF4YPR135W TOD6P34219 525 aa2.46□□□□□ -2.02
CTF4YPR135W TAF5P38129 798 aa2.46□□□□□ -2.02
CTF4YPR135W RIM11P38615 370 aa2.46□□□□□ -2.02
CTF4YPR135W BOL3P39724 118 aa2.46□□□□□ -2.02
CTF4YPR135W UTP22P53254 1237 aaPredicted RBP2.46□□□□□ -2.02
CTF4YPR135W FUR4P05316 633 aaKnown RBP2.45□□□□□ -2.02
CTF4YPR135W ECM2P38241 364 aaKnown RBP2.45□□□□□ -2.02
CTF4YPR135W ORC1P54784 914 aaPredicted RBP2.45□□□□□ -2.02
CTF4YPR135W ERT1P38140 529 aa2.45□□□□□ -2.02
CTF4YPR135W YGR045CP53229 120 aa2.45□□□□□ -2.02
CTF4YPR135W YIL177CP40434 1758 aa2.45□□□□□ -2.02
CTF4YPR135W YJL225CP40889 1758 aa2.45□□□□□ -2.02
CTF4YPR135W FIG2P25653 1609 aa2.45□□□□□ -2.02
CTF4YPR135W SMY2P32909 740 aaKnown RBP2.44□□□□□ -2.02
CTF4YPR135W YPL277CQ08989 487 aa2.44□□□□□ -2.02
CTF4YPR135W YRF1-4O13559 1382 aa2.44□□□□□ -2.02
CTF4YPR135W YLL066CQ99208 1374 aa2.44□□□□□ -2.02
CTF4YPR135W PAM1P37304 830 aaKnown RBP2.44□□□□□ -2.02
CTF4YPR135W NCS6P53088 359 aa2.44□□□□□ -2.02
CTF4YPR135W AVO1Q08236 1176 aa2.44□□□□□ -2.02
CTF4YPR135W YKL133CP36066 463 aa2.43□□□□□ -2.02
CTF4YPR135W TPP1Q03796 238 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-LR4P0C2I8 440 aaKnown RBP2.43□□□□□ -2.02
CTF4YPR135W TY1A-DR6P0CX70 440 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-ER1P0CX71 440 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-LR2P0CX72 440 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-PLP0CX73 440 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-JR1P0CX74 440 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-LR3P0CX75 440 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-ML2P0CX76 440 aa2.43□□□□□ -2.02
CTF4YPR135W IOC4Q04213 475 aa2.43□□□□□ -2.02
CTF4YPR135W GSF2Q04697 403 aaKnown RBP2.43□□□□□ -2.02
CTF4YPR135W TY1A-GR1Q12085 440 aa2.43□□□□□ -2.02
CTF4YPR135W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.43□□□□□ -2.02
CTF4YPR135W TY1A-OLQ92392 440 aaKnown RBP2.43□□□□□ -2.02
CTF4YPR135W ADE6P38972 1358 aaKnown RBP2.42□□□□□ -2.02
CTF4YPR135W SOD2P00447 233 aa2.42□□□□□ -2.02
CTF4YPR135W RPS13P05756 151 aaKnown RBP2.42□□□□□ -2.02
CTF4YPR135W RET1P22276 1149 aaKnown RBP2.42□□□□□ -2.02
CTF4YPR135W ABZ1P37254 787 aaPredicted RBP2.42□□□□□ -2.02
CTF4YPR135W NMD3P38861 518 aaKnown RBP2.42□□□□□ -2.02
CTF4YPR135W PUS7Q08647 676 aaKnown RBP2.42□□□□□ -2.02
CTF4YPR135W NYV1Q12255 253 aa2.42□□□□□ -2.02
CTF4YPR135W THS1P04801 734 aaKnown RBP2.42□□□□□ -2.02
CTF4YPR135W NNK1P36003 928 aa2.42□□□□□ -2.02
CTF4YPR135W YIL089WP40500 205 aa2.42□□□□□ -2.02
CTF4YPR135W BUG1Q12191 341 aa2.42□□□□□ -2.02
CTF4YPR135W SHM2P37291 469 aaKnown RBP2.41□□□□□ -2.02
CTF4YPR135W RSC4Q02206 625 aa2.41□□□□□ -2.02
CTF4YPR135W CLU1Q03690 1277 aaKnown RBP2.41□□□□□ -2.02
CTF4YPR135W FAS2P19097 1887 aaKnown RBP2.41□□□□□ -2.02
CTF4YPR135W TUB2P02557 457 aaKnown RBP2.41□□□□□ -2.02
CTF4YPR135W CTS1P29029 562 aa2.41□□□□□ -2.02
CTF4YPR135W SLM3Q12093 417 aa2.41□□□□□ -2.02
CTF4YPR135W RPS9BP05755 195 aaKnown RBP2.4□□□□□ -2.02
CTF4YPR135W GLO3P38682 493 aaKnown RBP2.4□□□□□ -2.02
CTF4YPR135W FOL2P51601 243 aaKnown RBP2.4□□□□□ -2.02
CTF4YPR135W YLR419WQ06698 1435 aaKnown RBP2.4□□□□□ -2.03
CTF4YPR135W YMR084WA2P2R3 262 aa2.4□□□□□ -2.03
CTF4YPR135W YML020WQ03722 664 aa2.4□□□□□ -2.03
CTF4YPR135W NOP8Q08287 484 aaPredicted RBP2.4□□□□□ -2.03
CTF4YPR135W TAD3Q9URQ3 322 aa2.4□□□□□ -2.03
CTF4YPR135W NAP1P25293 417 aaKnown RBP2.39□□□□□ -2.03
CTF4YPR135W YHL012WP38709 493 aa2.39□□□□□ -2.03
CTF4YPR135W SLS1P42900 643 aa2.39□□□□□ -2.03
CTF4YPR135W SNO2P53823 222 aa2.39□□□□□ -2.03
CTF4YPR135W YAF9P53930 226 aa2.39□□□□□ -2.03
CTF4YPR135W UFD2P54860 961 aa2.39□□□□□ -2.03
CTF4YPR135W AIM26P32858 118 aa2.39□□□□□ -2.03
CTF4YPR135W SAM35P14693 329 aa2.38□□□□□ -2.03
CTF4YPR135W YLR257WQ06146 321 aaKnown RBP2.38□□□□□ -2.03
CTF4YPR135W PMT7Q06644 662 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms