RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	TRL1	P09880	827 aa	Known RBP	6.13	□□□□□ -1.43
CBC2	YPL178W	GCD11	P32481	527 aa	Known RBP	6.13	□□□□□ -1.43
CBC2	YPL178W	PHO88	P38264	188 aa	Predicted RBP	6.13	□□□□□ -1.43
CBC2	YPL178W	YDR341C	Q05506	607 aa	Known RBP	6.13	□□□□□ -1.43
CBC2	YPL178W	UTP4	Q06679	776 aa	Known RBP	6.13	□□□□□ -1.43
CBC2	YPL178W	VIP1	Q06685	1146 aa	Known RBP	6.13	□□□□□ -1.43
CBC2	YPL178W	PSK2	Q08217	1101 aa		6.13	□□□□□ -1.43
CBC2	YPL178W	DSE3	Q08729	430 aa		6.13	□□□□□ -1.43
CBC2	YPL178W	YOR111W	Q99210	232 aa		6.13	□□□□□ -1.43
CBC2	YPL178W	FKS1	P38631	1876 aa	Known RBP	6.13	□□□□□ -1.43
CBC2	YPL178W	MATALPHA2	P0CY08	210 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	HMLALPHA2	P0CY09	210 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	SRP40	P32583	406 aa	Predicted RBP	6.12	□□□□□ -1.43
CBC2	YPL178W	BMH2	P34730	273 aa	Known RBP	6.12	□□□□□ -1.43
CBC2	YPL178W	AKR1	P39010	764 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	MXR1	P40029	184 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	PSF2	P40359	213 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	YGR125W	P53273	1036 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	GDE1	Q02979	1223 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	CSC1	Q06538	782 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	MET7	Q08645	548 aa		6.12	□□□□□ -1.43
CBC2	YPL178W	TY1B-A	O13527	1196 aa	Known RBP	6.11	□□□□□ -1.43
CBC2	YPL178W	SAM1	P10659	382 aa	Known RBP	6.11	□□□□□ -1.43
CBC2	YPL178W	UTR4	P32626	227 aa		6.11	□□□□□ -1.43
CBC2	YPL178W	YHL017W	P38745	532 aa		6.11	□□□□□ -1.43
CBC2	YPL178W	BUD6	P41697	788 aa		6.11	□□□□□ -1.43
CBC2	YPL178W	ECM23	Q02710	187 aa		6.11	□□□□□ -1.43
CBC2	YPL178W	SPH1	Q06160	661 aa		6.11	□□□□□ -1.43
CBC2	YPL178W	RKM4	Q12504	494 aa		6.11	□□□□□ -1.43
CBC2	YPL178W	SES1	P07284	462 aa	Known RBP	6.1	□□□□□ -1.43
CBC2	YPL178W	SRP54	P20424	541 aa	Known RBP	6.1	□□□□□ -1.43
CBC2	YPL178W	HCA4	P20448	770 aa	Known RBP	6.1	□□□□□ -1.43
CBC2	YPL178W	PAH1	P32567	862 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	SEC8	P32855	1065 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	RGT1	P32862	1170 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	TGL1	P34163	548 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	SAS3	P34218	831 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	CCT3	P39077	534 aa	Known RBP	6.1	□□□□□ -1.43
CBC2	YPL178W	EPL1	P43572	832 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	VPS53	P47061	822 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	FMS1	P50264	508 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	LIF1	P53150	421 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	BUL2	Q03758	920 aa	Known RBP	6.1	□□□□□ -1.43
CBC2	YPL178W	SUE1	Q06524	206 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	GUD1	Q07729	489 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	ICL2	Q12031	575 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	RLF2	Q12495	606 aa		6.1	□□□□□ -1.43
CBC2	YPL178W	MET6	P05694	767 aa	Known RBP	6.09	□□□□□ -1.43
CBC2	YPL178W	RPL19A	P0CX82	189 aa	Known RBP	6.09	□□□□□ -1.43
CBC2	YPL178W	RPL19B	P0CX83	189 aa	Predicted RBP	6.09	□□□□□ -1.43
CBC2	YPL178W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
CBC2	YPL178W	MCR1	P36060	302 aa	Known RBP	6.09	□□□□□ -1.43
CBC2	YPL178W	TTI1	P36097	1038 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	RXT2	P38255	430 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	RPN10	P38886	268 aa	Known RBP	6.09	□□□□□ -1.43
CBC2	YPL178W	HUL5	P53119	910 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	SLD5	Q03406	294 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	TMA64	Q04600	565 aa	Known RBP	6.09	□□□□□ -1.43
CBC2	YPL178W	CSM3	Q04659	317 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	DUS4	Q06063	367 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	MSC6	Q08818	692 aa	Known RBP	6.09	□□□□□ -1.43
CBC2	YPL178W	MET32	Q12041	191 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	CEX1	Q12453	761 aa		6.09	□□□□□ -1.43
CBC2	YPL178W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
CBC2	YPL178W	CBP3	P21560	335 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	SWI4	P25302	1093 aa	Known RBP	6.08	□□□□□ -1.44
CBC2	YPL178W	MCM4	P30665	933 aa	Known RBP	6.08	□□□□□ -1.44
CBC2	YPL178W	ASF1	P32447	279 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	PCI8	P40512	444 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	YIR014W	P40570	242 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	RRN7	P40992	514 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	CTF18	P49956	741 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	ASE1	P50275	885 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	BNI5	P53890	448 aa	Known RBP	6.08	□□□□□ -1.44
CBC2	YPL178W	ULP1	Q02724	621 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	DUS3	Q06053	668 aa	Known RBP	6.08	□□□□□ -1.44
CBC2	YPL178W	SMD2	Q06217	110 aa	Known RBP	6.08	□□□□□ -1.44
CBC2	YPL178W	MOT1	P32333	1867 aa		6.08	□□□□□ -1.44
CBC2	YPL178W	HSP82	P02829	709 aa	Known RBP	6.07	□□□□□ -1.44
CBC2	YPL178W	SRO9	P25567	434 aa	Known RBP	6.07	□□□□□ -1.44
CBC2	YPL178W	TFC4	P33339	1025 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	SHP1	P34223	423 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	YJR107W	P47145	328 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	ENT3	P47160	408 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	PEX14	P53112	341 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	NAF1	P53919	492 aa	Known RBP	6.07	□□□□□ -1.44
CBC2	YPL178W	YLR407W	Q06070	228 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	ISA1	Q07821	250 aa	Predicted RBP	6.07	□□□□□ -1.44
CBC2	YPL178W	TFB4	Q12004	338 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	ELG1	Q12050	791 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	YOR131C	Q12486	218 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	NBL1	Q3E7Y6	73 aa		6.07	□□□□□ -1.44
CBC2	YPL178W	AFT1	P22149	690 aa		6.06	□□□□□ -1.44
CBC2	YPL178W	TKL1	P23254	680 aa	Known RBP	6.06	□□□□□ -1.44
CBC2	YPL178W	UGA4	P32837	571 aa		6.06	□□□□□ -1.44
CBC2	YPL178W	TIM23	P32897	222 aa		6.06	□□□□□ -1.44
CBC2	YPL178W	LDH1	P38139	375 aa		6.06	□□□□□ -1.44
CBC2	YPL178W	REG2	P38232	338 aa		6.06	□□□□□ -1.44
CBC2	YPL178W	SUL1	P38359	859 aa		6.06	□□□□□ -1.44
CBC2	YPL178W	PAN5	P38787	379 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms