RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C HOS3Q02959 697 aaKnown RBP5.94□□□□□ -1.46
RPB8YOR224C SPO20Q04359 397 aa5.94□□□□□ -1.46
RPB8YOR224C AOS1Q06624 347 aa5.94□□□□□ -1.46
RPB8YOR224C TRP2P00899 507 aaKnown RBP5.93□□□□□ -1.46
RPB8YOR224C LYP1P32487 611 aa5.93□□□□□ -1.46
RPB8YOR224C MOT2P34909 587 aaKnown RBP5.93□□□□□ -1.46
RPB8YOR224C CCZ1P38273 704 aa5.93□□□□□ -1.46
RPB8YOR224C RGD1P38339 666 aa5.93□□□□□ -1.46
RPB8YOR224C PEX7P39108 375 aa5.93□□□□□ -1.46
RPB8YOR224C CTH1P47976 325 aa5.93□□□□□ -1.46
RPB8YOR224C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
RPB8YOR224C TIF35Q04067 274 aaKnown RBP5.93□□□□□ -1.46
RPB8YOR224C HSP78P33416 811 aa5.92□□□□□ -1.46
RPB8YOR224C POL12P38121 705 aaPredicted RBP5.92□□□□□ -1.46
RPB8YOR224C FAA4P47912 694 aaKnown RBP5.92□□□□□ -1.46
RPB8YOR224C HNT2P49775 206 aa5.92□□□□□ -1.46
RPB8YOR224C TNA1P53322 534 aa5.92□□□□□ -1.46
RPB8YOR224C VPS16Q03308 798 aa5.92□□□□□ -1.46
RPB8YOR224C PIN2Q12057 282 aa5.92□□□□□ -1.46
RPB8YOR224C FAL1Q12099 399 aaKnown RBP5.92□□□□□ -1.46
RPB8YOR224C INO1P11986 533 aa5.91□□□□□ -1.46
RPB8YOR224C DUT1P33317 147 aa5.91□□□□□ -1.46
RPB8YOR224C PAM1P37304 830 aaKnown RBP5.91□□□□□ -1.46
RPB8YOR224C ALD6P54115 500 aaKnown RBP5.91□□□□□ -1.46
RPB8YOR224C YER152CP10356 443 aa5.9□□□□□ -1.46
RPB8YOR224C SAM35P14693 329 aa5.9□□□□□ -1.46
RPB8YOR224C PRI2P20457 528 aa5.9□□□□□ -1.46
RPB8YOR224C BAS1P22035 811 aa5.9□□□□□ -1.46
RPB8YOR224C SRO9P25567 434 aaKnown RBP5.9□□□□□ -1.46
RPB8YOR224C KRI1P42846 591 aaKnown RBP5.9□□□□□ -1.46
RPB8YOR224C EEB1Q02891 456 aa5.9□□□□□ -1.46
RPB8YOR224C YLR225CQ05948 407 aaKnown RBP5.9□□□□□ -1.46
RPB8YOR224C SPP382Q06411 708 aaPredicted RBP5.9□□□□□ -1.46
RPB8YOR224C SPS1P08458 490 aa5.88□□□□□ -1.47
RPB8YOR224C YKL107WP34251 309 aa5.88□□□□□ -1.47
RPB8YOR224C SEA4P38164 1038 aa5.88□□□□□ -1.47
RPB8YOR224C SNF7P39929 240 aaKnown RBP5.88□□□□□ -1.47
RPB8YOR224C MPH1P40562 993 aa5.88□□□□□ -1.47
RPB8YOR224C YGL176CP46945 554 aa5.88□□□□□ -1.47
RPB8YOR224C YGR053CP53234 283 aa5.88□□□□□ -1.47
RPB8YOR224C RSC58Q07979 502 aa5.88□□□□□ -1.47
RPB8YOR224C RCL1Q08096 367 aaPredicted RBP5.88□□□□□ -1.47
RPB8YOR224C RPN3P40016 523 aaKnown RBP5.87□□□□□ -1.47
RPB8YOR224C GNT1Q12096 491 aa5.87□□□□□ -1.47
RPB8YOR224C WRS1Q12109 432 aaKnown RBP5.87□□□□□ -1.47
RPB8YOR224C ABD1P32783 436 aaPredicted RBP5.86□□□□□ -1.47
RPB8YOR224C AVT1P47082 602 aa5.86□□□□□ -1.47
RPB8YOR224C YOR352WQ08816 343 aa5.86□□□□□ -1.47
RPB8YOR224C RKM4Q12504 494 aa5.86□□□□□ -1.47
RPB8YOR224C DFG16Q99234 619 aa5.86□□□□□ -1.47
RPB8YOR224C PIK1P39104 1066 aa5.85□□□□□ -1.47
RPB8YOR224C MXR1P40029 184 aa5.85□□□□□ -1.47
RPB8YOR224C LRG1P35688 1017 aa5.84□□□□□ -1.47
RPB8YOR224C ETP1P38748 585 aaKnown RBP5.84□□□□□ -1.47
RPB8YOR224C YFL054CP43549 646 aa5.84□□□□□ -1.47
RPB8YOR224C ESC2Q06340 456 aa5.84□□□□□ -1.47
RPB8YOR224C OPI10Q08202 246 aa5.84□□□□□ -1.47
RPB8YOR224C LPX1Q12405 387 aaKnown RBP5.84□□□□□ -1.47
RPB8YOR224C RPL11AP0C0W9 174 aaKnown RBP5.83□□□□□ -1.48
RPB8YOR224C PIN4P34217 668 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
RPB8YOR224C RPL11BQ3E757 174 aaPredicted RBP5.83□□□□□ -1.48
RPB8YOR224C UGA2P38067 497 aa5.82□□□□□ -1.48
RPB8YOR224C BAP2P38084 609 aa5.82□□□□□ -1.48
RPB8YOR224C ECL1P48235 211 aa5.82□□□□□ -1.48
RPB8YOR224C SNF5P18480 905 aa5.81□□□□□ -1.48
RPB8YOR224C SEG2P34250 1132 aa5.81□□□□□ -1.48
RPB8YOR224C RFC5P38251 354 aa5.81□□□□□ -1.48
RPB8YOR224C SEC26P41810 973 aaKnown RBP5.81□□□□□ -1.48
RPB8YOR224C ACM1Q08981 209 aa5.81□□□□□ -1.48
RPB8YOR224C SVS1Q12254 260 aa5.81□□□□□ -1.48
RPB8YOR224C GEM1P39722 662 aa5.8□□□□□ -1.48
RPB8YOR224C ORC3P54790 616 aa5.8□□□□□ -1.48
RPB8YOR224C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
RPB8YOR224C RSM24Q03976 319 aa5.8□□□□□ -1.48
RPB8YOR224C TDA5Q06417 326 aaKnown RBP5.8□□□□□ -1.48
RPB8YOR224C YPL066WQ12194 479 aa5.8□□□□□ -1.48
RPB8YOR224C GAS1P22146 559 aaKnown RBP5.79□□□□□ -1.48
RPB8YOR224C DBP2P24783 546 aaKnown RBP5.79□□□□□ -1.48
RPB8YOR224C SBA1P28707 216 aaKnown RBP5.79□□□□□ -1.48
RPB8YOR224C YKL069WP36088 180 aa5.79□□□□□ -1.48
RPB8YOR224C THS1P04801 734 aaKnown RBP5.78□□□□□ -1.48
RPB8YOR224C AGP1P25376 633 aa5.78□□□□□ -1.48
RPB8YOR224C APL1P27351 700 aa5.78□□□□□ -1.48
RPB8YOR224C VBA5P36172 582 aa5.78□□□□□ -1.48
RPB8YOR224C MBP1P39678 833 aa5.78□□□□□ -1.48
RPB8YOR224C PRP43P53131 767 aaKnown RBP5.78□□□□□ -1.48
RPB8YOR224C KIN2P13186 1147 aaKnown RBP5.77□□□□□ -1.49
RPB8YOR224C PNT1P38969 423 aa5.77□□□□□ -1.49
RPB8YOR224C SNO2P53823 222 aa5.77□□□□□ -1.49
RPB8YOR224C SAH1P39954 449 aaKnown RBP5.76□□□□□ -1.49
RPB8YOR224C ENV11P53246 860 aa5.76□□□□□ -1.49
RPB8YOR224C MRPL22P53881 309 aa5.76□□□□□ -1.49
RPB8YOR224C CYC1P00044 109 aaPredicted RBP5.75□□□□□ -1.49
RPB8YOR224C BI4P03879 638 aa5.75□□□□□ -1.49
RPB8YOR224C RNQ1P25367 405 aa5.75□□□□□ -1.49
RPB8YOR224C GRX1P25373 110 aaKnown RBP5.75□□□□□ -1.49
RPB8YOR224C SIP5P40210 489 aaKnown RBP5.75□□□□□ -1.49
RPB8YOR224C SHE9Q04172 456 aa5.75□□□□□ -1.49
RPB8YOR224C CMP2P14747 604 aa5.74□□□□□ -1.49
RPB8YOR224C SLA2P33338 968 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms