RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C IDI1P15496 288 aa7.16□□□□□ -1.26
SCS7YMR272C SRP54P20424 541 aaKnown RBP7.16□□□□□ -1.26
SCS7YMR272C BRL1P38770 471 aa7.16□□□□□ -1.26
SCS7YMR272C SGM1P47166 707 aa7.16□□□□□ -1.26
SCS7YMR272C AZR1P50080 613 aa7.16□□□□□ -1.26
SCS7YMR272C FOL2P51601 243 aaKnown RBP7.16□□□□□ -1.26
SCS7YMR272C NAF1P53919 492 aaKnown RBP7.16□□□□□ -1.26
SCS7YMR272C SMD2Q06217 110 aaKnown RBP7.16□□□□□ -1.26
SCS7YMR272C SUE1Q06524 206 aa7.16□□□□□ -1.26
SCS7YMR272C SMC5Q08204 1093 aa7.16□□□□□ -1.26
SCS7YMR272C HIF1Q12373 385 aa7.16□□□□□ -1.26
SCS7YMR272C ATG11Q12527 1178 aa7.16□□□□□ -1.26
SCS7YMR272C RNR2P09938 399 aaKnown RBP7.15□□□□□ -1.26
SCS7YMR272C UBC1P21734 215 aaKnown RBP7.15□□□□□ -1.26
SCS7YMR272C FBP26P32604 452 aa7.15□□□□□ -1.26
SCS7YMR272C RXT2P38255 430 aa7.15□□□□□ -1.26
SCS7YMR272C FYV10P40492 516 aa7.15□□□□□ -1.26
SCS7YMR272C BUD6P41697 788 aa7.15□□□□□ -1.26
SCS7YMR272C ASE1P50275 885 aa7.15□□□□□ -1.26
SCS7YMR272C YGL039WP53183 348 aaKnown RBP7.15□□□□□ -1.26
SCS7YMR272C RTC4P53850 401 aa7.15□□□□□ -1.26
SCS7YMR272C FAR11P53917 953 aa7.15□□□□□ -1.26
SCS7YMR272C MFM1Q02783 413 aa7.15□□□□□ -1.26
SCS7YMR272C YMR321CQ04898 105 aa7.15□□□□□ -1.26
SCS7YMR272C OXR1Q08952 273 aa7.15□□□□□ -1.26
SCS7YMR272C TIP41Q12199 356 aa7.15□□□□□ -1.26
SCS7YMR272C ARP6Q12509 438 aa7.15□□□□□ -1.26
SCS7YMR272C PGA3Q12746 312 aaKnown RBP7.15□□□□□ -1.26
SCS7YMR272C MET6P05694 767 aaKnown RBP7.14□□□□□ -1.27
SCS7YMR272C ATG19P35193 415 aa7.14□□□□□ -1.27
SCS7YMR272C TTI1P36097 1038 aa7.14□□□□□ -1.27
SCS7YMR272C POA1P38218 177 aa7.14□□□□□ -1.27
SCS7YMR272C YHL017WP38745 532 aa7.14□□□□□ -1.27
SCS7YMR272C AKR1P39010 764 aa7.14□□□□□ -1.27
SCS7YMR272C RPS7BP48164 190 aaKnown RBP7.14□□□□□ -1.27
SCS7YMR272C ALT2P52892 507 aa7.14□□□□□ -1.27
SCS7YMR272C HDA1P53973 706 aa7.14□□□□□ -1.27
SCS7YMR272C CRD1Q07560 283 aa7.14□□□□□ -1.27
SCS7YMR272C GPI13Q07830 1017 aa7.14□□□□□ -1.27
SCS7YMR272C MATALPHA2P0CY08 210 aa7.13□□□□□ -1.27
SCS7YMR272C HMLALPHA2P0CY09 210 aa7.13□□□□□ -1.27
SCS7YMR272C THR4P16120 514 aaKnown RBP7.13□□□□□ -1.27
SCS7YMR272C HCA4P20448 770 aaKnown RBP7.13□□□□□ -1.27
SCS7YMR272C CBP3P21560 335 aa7.13□□□□□ -1.27
SCS7YMR272C GSY1P23337 708 aa7.13□□□□□ -1.27
SCS7YMR272C POT1P27796 417 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SCS7YMR272C MSS51P32335 436 aa7.13□□□□□ -1.27
SCS7YMR272C VPS35P34110 944 aa7.13□□□□□ -1.27
SCS7YMR272C JJJ3P47138 172 aa7.13□□□□□ -1.27
SCS7YMR272C MMR1Q06324 491 aa7.13□□□□□ -1.27
SCS7YMR272C CDC48P25694 835 aaKnown RBP7.12□□□□□ -1.27
SCS7YMR272C IME2P32581 645 aa7.12□□□□□ -1.27
SCS7YMR272C MMF1P40185 145 aaKnown RBP7.12□□□□□ -1.27
SCS7YMR272C VID28P40547 921 aa7.12□□□□□ -1.27
SCS7YMR272C RET3P53600 189 aa7.12□□□□□ -1.27
SCS7YMR272C DSE4P53753 1117 aa7.12□□□□□ -1.27
SCS7YMR272C YLH47Q06493 454 aa7.12□□□□□ -1.27
SCS7YMR272C RLF2Q12495 606 aa7.12□□□□□ -1.27
SCS7YMR272C MOT1P32333 1867 aa7.12□□□□□ -1.27
SCS7YMR272C VPS13Q07878 3144 aa7.11□□□□□ -1.27
SCS7YMR272C PHR1P05066 565 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
SCS7YMR272C POL3P15436 1097 aa7.11□□□□□ -1.27
SCS7YMR272C STI1P15705 589 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
SCS7YMR272C FLR1P38124 548 aa7.11□□□□□ -1.27
SCS7YMR272C PCI8P40512 444 aa7.11□□□□□ -1.27
SCS7YMR272C YGL138CP53122 345 aa7.11□□□□□ -1.27
SCS7YMR272C HXT17P53631 564 aa7.11□□□□□ -1.27
SCS7YMR272C HEH2Q03281 663 aa7.11□□□□□ -1.27
SCS7YMR272C YLR326WQ06170 240 aaKnown RBP7.11□□□□□ -1.27
SCS7YMR272C OSW2Q12202 724 aa7.11□□□□□ -1.27
SCS7YMR272C YDR461C-AQ2V2P7 80 aa7.11□□□□□ -1.27
SCS7YMR272C ILV1P00927 576 aaKnown RBP7.1□□□□□ -1.27
SCS7YMR272C SWI4P25302 1093 aaKnown RBP7.1□□□□□ -1.27
SCS7YMR272C RPN10P38886 268 aaKnown RBP7.1□□□□□ -1.27
SCS7YMR272C HXT13P39924 564 aa7.1□□□□□ -1.27
SCS7YMR272C YGR035CP53222 116 aa7.1□□□□□ -1.27
SCS7YMR272C ORC4P54791 529 aa7.1□□□□□ -1.27
SCS7YMR272C CUS1Q02554 436 aaPredicted RBP7.1□□□□□ -1.27
SCS7YMR272C SPO71Q03868 1245 aa7.1□□□□□ -1.27
SCS7YMR272C GIS4Q04233 774 aa7.1□□□□□ -1.27
SCS7YMR272C SDH5Q08230 162 aa7.1□□□□□ -1.27
SCS7YMR272C SLK19Q08581 821 aaKnown RBP7.1□□□□□ -1.27
SCS7YMR272C SMC6Q12749 1114 aa7.1□□□□□ -1.27
SCS7YMR272C TIF1P10081 395 aaKnown RBP7.09□□□□□ -1.27
SCS7YMR272C CLN3P13365 580 aa7.09□□□□□ -1.27
SCS7YMR272C MSD1P15179 658 aaKnown RBP7.09□□□□□ -1.27
SCS7YMR272C SYN8P31377 255 aa7.09□□□□□ -1.27
SCS7YMR272C APN2P38207 520 aa7.09□□□□□ -1.27
SCS7YMR272C ORC6P38826 435 aa7.09□□□□□ -1.27
SCS7YMR272C NDT80P38830 627 aa7.09□□□□□ -1.27
SCS7YMR272C BUD16P39988 312 aa7.09□□□□□ -1.27
SCS7YMR272C AIM9P40053 627 aaKnown RBP7.09□□□□□ -1.27
SCS7YMR272C EAF7P53911 425 aaKnown RBP7.09□□□□□ -1.27
SCS7YMR272C YNL134CP53912 376 aaKnown RBP7.09□□□□□ -1.27
SCS7YMR272C UBR2Q07963 1872 aa7.09□□□□□ -1.28
SCS7YMR272C HSP82P02829 709 aaKnown RBP7.08□□□□□ -1.28
SCS7YMR272C FRS2P15625 503 aaKnown RBP7.08□□□□□ -1.28
SCS7YMR272C CLC1P17891 233 aa7.08□□□□□ -1.28
SCS7YMR272C SUV3P32580 737 aa7.08□□□□□ -1.28
SCS7YMR272C MRPL7P36519 292 aa7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms