RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W GPB2P39717 880 aa4.62□□□□□ -1.67
SEC22YLR268W MNN10P50108 393 aaKnown RBP4.62□□□□□ -1.67
SEC22YLR268W SLI1P53304 468 aa4.62□□□□□ -1.67
SEC22YLR268W RSM24Q03976 319 aa4.62□□□□□ -1.67
SEC22YLR268W RXT3Q07458 294 aa4.62□□□□□ -1.67
SEC22YLR268W ACK1Q07622 623 aaPredicted RBP4.62□□□□□ -1.67
SEC22YLR268W CDC6P09119 513 aa4.61□□□□□ -1.67
SEC22YLR268W ALG3P38179 458 aa4.61□□□□□ -1.67
SEC22YLR268W PBP1P53297 722 aaKnown RBP4.61□□□□□ -1.67
SEC22YLR268W SPO21Q12411 609 aa4.61□□□□□ -1.67
SEC22YLR268W GAL10P04397 699 aa4.6□□□□□ -1.67
SEC22YLR268W LST4P34239 828 aa4.6□□□□□ -1.67
SEC22YLR268W TMA10Q06177 86 aa4.6□□□□□ -1.67
SEC22YLR268W GPB1Q08886 897 aa4.6□□□□□ -1.67
SEC22YLR268W OXR1Q08952 273 aa4.6□□□□□ -1.67
SEC22YLR268W NTO1Q12311 748 aa4.6□□□□□ -1.67
SEC22YLR268W SRM1P21827 482 aa4.59□□□□□ -1.67
SEC22YLR268W RFC5P38251 354 aa4.59□□□□□ -1.67
SEC22YLR268W YHL050CP38721 697 aa4.59□□□□□ -1.67
SEC22YLR268W YHR219WP38900 624 aa4.59□□□□□ -1.67
SEC22YLR268W DAK2P43550 591 aa4.59□□□□□ -1.67
SEC22YLR268W MCM6P53091 1017 aaKnown RBP4.59□□□□□ -1.67
SEC22YLR268W SUN4P53616 420 aa4.59□□□□□ -1.67
SEC22YLR268W TOS4Q06266 489 aa4.59□□□□□ -1.67
SEC22YLR268W CMP2P14747 604 aa4.58□□□□□ -1.68
SEC22YLR268W AIM21P40563 679 aa4.58□□□□□ -1.68
SEC22YLR268W VPS62P53285 467 aa4.58□□□□□ -1.68
SEC22YLR268W CTF4Q01454 927 aa4.58□□□□□ -1.68
SEC22YLR268W RIB2Q12362 591 aaKnown RBP4.58□□□□□ -1.68
SEC22YLR268W MET4P32389 672 aa4.57□□□□□ -1.68
SEC22YLR268W GEF1P37020 779 aa4.57□□□□□ -1.68
SEC22YLR268W PPX1P38698 397 aa4.57□□□□□ -1.68
SEC22YLR268W CHS7P38843 316 aa4.57□□□□□ -1.68
SEC22YLR268W ENT3P47160 408 aa4.57□□□□□ -1.68
SEC22YLR268W SIZ1Q04195 904 aa4.57□□□□□ -1.68
SEC22YLR268W HXK1P04806 485 aaKnown RBP4.56□□□□□ -1.68
SEC22YLR268W KIN2P13186 1147 aaKnown RBP4.56□□□□□ -1.68
SEC22YLR268W PIC2P40035 300 aa4.56□□□□□ -1.68
SEC22YLR268W PMA1P05030 918 aaKnown RBP4.55□□□□□ -1.68
SEC22YLR268W DED1P06634 604 aaKnown RBP4.55□□□□□ -1.68
SEC22YLR268W RAD53P22216 821 aa4.55□□□□□ -1.68
SEC22YLR268W FAA3P39002 694 aa4.55□□□□□ -1.68
SEC22YLR268W YLR224WQ05947 369 aa4.55□□□□□ -1.68
SEC22YLR268W ATG13Q06628 738 aa4.55□□□□□ -1.68
SEC22YLR268W DCG1P32460 244 aa4.54□□□□□ -1.68
SEC22YLR268W RGD1P38339 666 aa4.54□□□□□ -1.68
SEC22YLR268W YAP6Q03935 383 aa4.54□□□□□ -1.68
SEC22YLR268W SVS1Q12254 260 aa4.54□□□□□ -1.68
SEC22YLR268W NOP12Q08208 459 aaKnown RBP4.53□□□□□ -1.68
SEC22YLR268W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
SEC22YLR268W HMI1Q12039 706 aa4.53□□□□□ -1.68
SEC22YLR268W APL1P27351 700 aa4.52□□□□□ -1.69
SEC22YLR268W MKK2P32491 506 aa4.52□□□□□ -1.69
SEC22YLR268W DEF1P35732 738 aaKnown RBP4.52□□□□□ -1.69
SEC22YLR268W PHO23P50947 330 aa4.52□□□□□ -1.69
SEC22YLR268W SIW14P53965 281 aa4.52□□□□□ -1.69
SEC22YLR268W RAT1Q02792 1006 aaKnown RBP4.52□□□□□ -1.69
SEC22YLR268W YFL054CP43549 646 aa4.51□□□□□ -1.69
SEC22YLR268W MSC2Q03455 724 aa4.51□□□□□ -1.69
SEC22YLR268W MCD1Q12158 566 aa4.51□□□□□ -1.69
SEC22YLR268W YER152CP10356 443 aa4.5□□□□□ -1.69
SEC22YLR268W EMC1P25574 760 aa4.5□□□□□ -1.69
SEC22YLR268W STM1P39015 273 aaKnown RBP4.5□□□□□ -1.69
SEC22YLR268W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SEC22YLR268W ROD1Q02805 837 aa4.5□□□□□ -1.69
SEC22YLR268W MSC6Q08818 692 aaKnown RBP4.5□□□□□ -1.69
SEC22YLR268W SSF1P38789 453 aaPredicted RBP4.49□□□□□ -1.69
SEC22YLR268W KIN4Q01919 800 aa4.49□□□□□ -1.69
SEC22YLR268W PRE9P23638 258 aaKnown RBP4.48□□□□□ -1.69
SEC22YLR268W MSS4P38994 779 aa4.48□□□□□ -1.69
SEC22YLR268W HXT13P39924 564 aa4.48□□□□□ -1.69
SEC22YLR268W CNN1P43618 361 aa4.48□□□□□ -1.69
SEC22YLR268W GTF1P53260 183 aaPredicted RBP4.48□□□□□ -1.69
SEC22YLR268W HXT17P53631 564 aa4.48□□□□□ -1.69
SEC22YLR268W HXT15P54854 567 aa4.48□□□□□ -1.69
SEC22YLR268W WHI5Q12416 295 aa4.48□□□□□ -1.69
SEC22YLR268W DBP5P20449 482 aaKnown RBP4.47□□□□□ -1.69
SEC22YLR268W ACE2P21192 770 aa4.47□□□□□ -1.69
SEC22YLR268W SYP1P25623 870 aaKnown RBP4.47□□□□□ -1.69
SEC22YLR268W RPT1P33299 467 aaKnown RBP4.47□□□□□ -1.69
SEC22YLR268W MRPS18P42847 217 aa4.47□□□□□ -1.69
SEC22YLR268W IOC3P43596 787 aa4.47□□□□□ -1.69
SEC22YLR268W GNP1P48813 663 aa4.47□□□□□ -1.69
SEC22YLR268W YGR122WP53272 402 aa4.47□□□□□ -1.69
SEC22YLR268W YML122CQ03207 126 aa4.47□□□□□ -1.69
SEC22YLR268W MLS1P30952 554 aa4.46□□□□□ -1.7
SEC22YLR268W SEC8P32855 1065 aa4.46□□□□□ -1.7
SEC22YLR268W RRT14P40470 206 aa4.46□□□□□ -1.7
SEC22YLR268W BAS1P22035 811 aa4.45□□□□□ -1.7
SEC22YLR268W PLB1P39105 664 aa4.45□□□□□ -1.7
SEC22YLR268W SIP5P40210 489 aaKnown RBP4.45□□□□□ -1.7
SEC22YLR268W MND2P40577 368 aa4.45□□□□□ -1.7
SEC22YLR268W GCV2P49095 1034 aa4.45□□□□□ -1.7
SEC22YLR268W ADY3Q07732 790 aa4.45□□□□□ -1.7
SEC22YLR268W RPP2AP05319 106 aaKnown RBP4.44□□□□□ -1.7
SEC22YLR268W PEP7P32609 515 aa4.44□□□□□ -1.7
SEC22YLR268W OAR1P35731 278 aa4.44□□□□□ -1.7
SEC22YLR268W MPH1P40562 993 aa4.44□□□□□ -1.7
SEC22YLR268W MET12P46151 657 aa4.44□□□□□ -1.7
SEC22YLR268W TPO1Q07824 586 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 91.5 ms