RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W SPC42P36094 363 aa1.97□□□□□ -2.09
SLX4YLR135W MSE1P48525 536 aa1.97□□□□□ -2.09
SLX4YLR135W UTP22P53254 1237 aaPredicted RBP1.97□□□□□ -2.09
SLX4YLR135W PEX13P80667 386 aa1.97□□□□□ -2.09
SLX4YLR135W SBA1P28707 216 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W MKK2P32491 506 aa1.96□□□□□ -2.1
SLX4YLR135W SRP40P32583 406 aaPredicted RBP1.96□□□□□ -2.1
SLX4YLR135W YKL091CP33324 310 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W RER2P35196 286 aa1.96□□□□□ -2.1
SLX4YLR135W YKL077WP36081 392 aa1.96□□□□□ -2.1
SLX4YLR135W YKL069WP36088 180 aa1.96□□□□□ -2.1
SLX4YLR135W YHR020WP38708 688 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W MTR4P47047 1073 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W TYW3P53177 273 aa1.96□□□□□ -2.1
SLX4YLR135W ORC3P54790 616 aa1.96□□□□□ -2.1
SLX4YLR135W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SLX4YLR135W SPO71Q03868 1245 aa1.96□□□□□ -2.1
SLX4YLR135W UTP5Q04177 643 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W SPO20Q04359 397 aa1.96□□□□□ -2.1
SLX4YLR135W TDA5Q06417 326 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W PPM2Q08282 695 aa1.96□□□□□ -2.1
SLX4YLR135W CDC53Q12018 815 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W FAL1Q12099 399 aaKnown RBP1.96□□□□□ -2.1
SLX4YLR135W MRP8P35719 219 aa1.95□□□□□ -2.1
SLX4YLR135W ADD66P36040 267 aa1.95□□□□□ -2.1
SLX4YLR135W PBP2P38151 413 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SLX4YLR135W BRN1P38170 754 aa1.95□□□□□ -2.1
SLX4YLR135W NEM1P38757 446 aa1.95□□□□□ -2.1
SLX4YLR135W FPR3P38911 411 aaKnown RBP1.95□□□□□ -2.1
SLX4YLR135W SNF7P39929 240 aaKnown RBP1.95□□□□□ -2.1
SLX4YLR135W MEC3Q02574 474 aa1.95□□□□□ -2.1
SLX4YLR135W RKM4Q12504 494 aa1.95□□□□□ -2.1
SLX4YLR135W CIT2P08679 460 aa1.95□□□□□ -2.1
SLX4YLR135W RAD4P14736 754 aa1.95□□□□□ -2.1
SLX4YLR135W DBP5P20449 482 aaKnown RBP1.95□□□□□ -2.1
SLX4YLR135W PRI2P20457 528 aa1.95□□□□□ -2.1
SLX4YLR135W SYP1P25623 870 aaKnown RBP1.95□□□□□ -2.1
SLX4YLR135W WHI3P34761 661 aaKnown RBP1.95□□□□□ -2.1
SLX4YLR135W PAN5P38787 379 aa1.95□□□□□ -2.1
SLX4YLR135W POL5P39985 1022 aaKnown RBP1.95□□□□□ -2.1
SLX4YLR135W NEO1P40527 1151 aa1.95□□□□□ -2.1
SLX4YLR135W IRR1P40541 1150 aa1.95□□□□□ -2.1
SLX4YLR135W CNN1P43618 361 aa1.95□□□□□ -2.1
SLX4YLR135W ROD1Q02805 837 aa1.95□□□□□ -2.1
SLX4YLR135W TIF35Q04067 274 aaKnown RBP1.95□□□□□ -2.1
SLX4YLR135W EST2Q06163 884 aa1.95□□□□□ -2.1
SLX4YLR135W YLL054CQ12244 843 aa1.95□□□□□ -2.1
SLX4YLR135W YOR131CQ12486 218 aa1.95□□□□□ -2.1
SLX4YLR135W BAS1P22035 811 aa1.94□□□□□ -2.1
SLX4YLR135W RAD53P22216 821 aa1.94□□□□□ -2.1
SLX4YLR135W STE5P32917 917 aa1.94□□□□□ -2.1
SLX4YLR135W PBY1P38254 753 aa1.94□□□□□ -2.1
SLX4YLR135W CHZ1P40019 153 aaPredicted RBP1.94□□□□□ -2.1
SLX4YLR135W PFD1P46988 109 aa1.94□□□□□ -2.1
SLX4YLR135W HUL5P53119 910 aa1.94□□□□□ -2.1
SLX4YLR135W RNH70P53331 553 aa1.94□□□□□ -2.1
SLX4YLR135W ALG12P53730 551 aa1.94□□□□□ -2.1
SLX4YLR135W FAR11P53917 953 aa1.94□□□□□ -2.1
SLX4YLR135W PRP9P19736 530 aaKnown RBP1.94□□□□□ -2.1
SLX4YLR135W SCT1P32784 759 aa1.94□□□□□ -2.1
SLX4YLR135W AFG2P32794 780 aa1.94□□□□□ -2.1
SLX4YLR135W PIN4P34217 668 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SLX4YLR135W VBA5P36172 582 aa1.94□□□□□ -2.1
SLX4YLR135W RGD1P38339 666 aa1.94□□□□□ -2.1
SLX4YLR135W MPT5P39016 859 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SLX4YLR135W MPH1P40562 993 aa1.94□□□□□ -2.1
SLX4YLR135W SLS1P42900 643 aa1.94□□□□□ -2.1
SLX4YLR135W TIM54P47045 478 aa1.94□□□□□ -2.1
SLX4YLR135W HNT2P49775 206 aa1.94□□□□□ -2.1
SLX4YLR135W ERP6P53198 216 aa1.94□□□□□ -2.1
SLX4YLR135W RAT1Q02792 1006 aaKnown RBP1.94□□□□□ -2.1
SLX4YLR135W SPO75Q07798 868 aa1.94□□□□□ -2.1
SLX4YLR135W ELG1Q12050 791 aa1.94□□□□□ -2.1
SLX4YLR135W INO1P11986 533 aa1.93□□□□□ -2.1
SLX4YLR135W YKL107WP34251 309 aa1.93□□□□□ -2.1
SLX4YLR135W REI1P38344 393 aaPredicted RBP1.93□□□□□ -2.1
SLX4YLR135W GGA2P38817 585 aaKnown RBP1.93□□□□□ -2.1
SLX4YLR135W VPS53P47061 822 aa1.93□□□□□ -2.1
SLX4YLR135W FMP25Q08023 583 aa1.93□□□□□ -2.1
SLX4YLR135W FLC1Q08967 793 aa1.93□□□□□ -2.1
SLX4YLR135W GNT1Q12096 491 aa1.93□□□□□ -2.1
SLX4YLR135W YLR125WQ12138 136 aa1.93□□□□□ -2.1
SLX4YLR135W YPL066WQ12194 479 aa1.93□□□□□ -2.1
SLX4YLR135W OSH2Q12451 1283 aa1.93□□□□□ -2.1
SLX4YLR135W ERS1P17261 260 aa1.93□□□□□ -2.1
SLX4YLR135W GAL11P19659 1081 aa1.93□□□□□ -2.1
SLX4YLR135W HSP60P19882 572 aaKnown RBP1.93□□□□□ -2.1
SLX4YLR135W RPL8BP29453 256 aaKnown RBP1.93□□□□□ -2.1
SLX4YLR135W ABD1P32783 436 aaPredicted RBP1.93□□□□□ -2.1
SLX4YLR135W PPG1P32838 368 aa1.93□□□□□ -2.1
SLX4YLR135W ALG3P38179 458 aa1.93□□□□□ -2.1
SLX4YLR135W ATG14P38270 344 aa1.93□□□□□ -2.1
SLX4YLR135W YBR184WP38299 523 aa1.93□□□□□ -2.1
SLX4YLR135W HSE1P38753 452 aa1.93□□□□□ -2.1
SLX4YLR135W YAR028WP39548 234 aa1.93□□□□□ -2.1
SLX4YLR135W UTP8P53276 713 aaKnown RBP1.93□□□□□ -2.1
SLX4YLR135W CTF4Q01454 927 aa1.93□□□□□ -2.1
SLX4YLR135W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SLX4YLR135W ESC2Q06340 456 aa1.93□□□□□ -2.1
SLX4YLR135W YPL260WQ08977 551 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms