RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C YOR059CQ08448 450 aaKnown RBP5.65□□□□□ -1.5
VPS25YJR102C RKM4Q12504 494 aa5.65□□□□□ -1.5
VPS25YJR102C SNF7P39929 240 aaKnown RBP5.64□□□□□ -1.51
VPS25YJR102C MPH1P40562 993 aa5.64□□□□□ -1.51
VPS25YJR102C YVC1Q12324 675 aa5.64□□□□□ -1.51
VPS25YJR102C SBP1P10080 294 aaKnown RBP5.63□□□□□ -1.51
VPS25YJR102C YER152CP10356 443 aa5.63□□□□□ -1.51
VPS25YJR102C AGP1P25376 633 aa5.63□□□□□ -1.51
VPS25YJR102C SBA1P28707 216 aaKnown RBP5.63□□□□□ -1.51
VPS25YJR102C YHL012WP38709 493 aa5.63□□□□□ -1.51
VPS25YJR102C SPF1P39986 1215 aaKnown RBP5.63□□□□□ -1.51
VPS25YJR102C SPP382Q06411 708 aaPredicted RBP5.63□□□□□ -1.51
VPS25YJR102C GNT1Q12096 491 aa5.63□□□□□ -1.51
VPS25YJR102C YPL066WQ12194 479 aa5.63□□□□□ -1.51
VPS25YJR102C COQ4O13525 335 aa5.62□□□□□ -1.51
VPS25YJR102C CYC7P00045 113 aa5.62□□□□□ -1.51
VPS25YJR102C YSC84P32793 468 aa5.61□□□□□ -1.51
VPS25YJR102C PIN4P34217 668 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
VPS25YJR102C VBA5P36172 582 aa5.61□□□□□ -1.51
VPS25YJR102C TNA1P53322 534 aa5.61□□□□□ -1.51
VPS25YJR102C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
VPS25YJR102C NAN1Q02931 896 aaKnown RBP5.61□□□□□ -1.51
VPS25YJR102C HOS3Q02959 697 aaKnown RBP5.61□□□□□ -1.51
VPS25YJR102C TRP3P00937 484 aa5.6□□□□□ -1.51
VPS25YJR102C RAD4P14736 754 aa5.6□□□□□ -1.51
VPS25YJR102C OYE3P41816 400 aaPredicted RBP5.6□□□□□ -1.51
VPS25YJR102C MED7Q08278 222 aa5.6□□□□□ -1.51
VPS25YJR102C TRE1Q08919 783 aa5.6□□□□□ -1.51
VPS25YJR102C PRO1P32264 428 aa5.59□□□□□ -1.51
VPS25YJR102C MRP8P35719 219 aa5.59□□□□□ -1.51
VPS25YJR102C CCZ1P38273 704 aa5.59□□□□□ -1.51
VPS25YJR102C YBR184WP38299 523 aa5.59□□□□□ -1.51
VPS25YJR102C PTC7P38797 343 aa5.59□□□□□ -1.51
VPS25YJR102C MBP1P39678 833 aa5.59□□□□□ -1.51
VPS25YJR102C GTS1P40956 396 aa5.59□□□□□ -1.51
VPS25YJR102C TIM54P47045 478 aa5.59□□□□□ -1.51
VPS25YJR102C YJL049WP47048 450 aa5.59□□□□□ -1.51
VPS25YJR102C SHE9Q04172 456 aa5.59□□□□□ -1.51
VPS25YJR102C YOL098CQ12496 1037 aa5.59□□□□□ -1.51
VPS25YJR102C GCD1P09032 578 aaPredicted RBP5.58□□□□□ -1.52
VPS25YJR102C RPL11AP0C0W9 174 aaKnown RBP5.58□□□□□ -1.52
VPS25YJR102C SRP40P32583 406 aaPredicted RBP5.58□□□□□ -1.52
VPS25YJR102C MDL2P33311 773 aa5.58□□□□□ -1.52
VPS25YJR102C TOS1P38288 455 aa5.58□□□□□ -1.52
VPS25YJR102C RPN3P40016 523 aaKnown RBP5.58□□□□□ -1.52
VPS25YJR102C MXR1P40029 184 aa5.58□□□□□ -1.52
VPS25YJR102C ALO1P54783 526 aaKnown RBP5.58□□□□□ -1.52
VPS25YJR102C SDH1Q00711 640 aa5.58□□□□□ -1.52
VPS25YJR102C NBA1Q08229 501 aaKnown RBP5.58□□□□□ -1.52
VPS25YJR102C RSB1Q08417 382 aa5.58□□□□□ -1.52
VPS25YJR102C CDC53Q12018 815 aaKnown RBP5.58□□□□□ -1.52
VPS25YJR102C RPL11BQ3E757 174 aaPredicted RBP5.58□□□□□ -1.52
VPS25YJR102C AIM26P32858 118 aa5.57□□□□□ -1.52
VPS25YJR102C YKR073CP36153 106 aa5.57□□□□□ -1.52
VPS25YJR102C OCA5P38738 679 aa5.57□□□□□ -1.52
VPS25YJR102C YFL054CP43549 646 aa5.57□□□□□ -1.52
VPS25YJR102C SSY1Q03770 852 aa5.57□□□□□ -1.52
VPS25YJR102C RCL1Q08096 367 aaPredicted RBP5.57□□□□□ -1.52
VPS25YJR102C OSH2Q12451 1283 aa5.57□□□□□ -1.52
VPS25YJR102C SAM35P14693 329 aa5.56□□□□□ -1.52
VPS25YJR102C ADP1P25371 1049 aa5.56□□□□□ -1.52
VPS25YJR102C LIP5P32875 414 aa5.56□□□□□ -1.52
VPS25YJR102C STE5P32917 917 aa5.56□□□□□ -1.52
VPS25YJR102C SIP5P40210 489 aaKnown RBP5.56□□□□□ -1.52
VPS25YJR102C IRR1P40541 1150 aa5.56□□□□□ -1.52
VPS25YJR102C SPO75Q07798 868 aa5.56□□□□□ -1.52
VPS25YJR102C DBP2P24783 546 aaKnown RBP5.55□□□□□ -1.52
VPS25YJR102C SRO9P25567 434 aaKnown RBP5.55□□□□□ -1.52
VPS25YJR102C PBY1P38254 753 aa5.55□□□□□ -1.52
VPS25YJR102C PNT1P38969 423 aa5.55□□□□□ -1.52
VPS25YJR102C PEX7P39108 375 aa5.55□□□□□ -1.52
VPS25YJR102C ACM1Q08981 209 aa5.55□□□□□ -1.52
VPS25YJR102C SNF5P18480 905 aa5.54□□□□□ -1.52
VPS25YJR102C YKL091CP33324 310 aaKnown RBP5.54□□□□□ -1.52
VPS25YJR102C OMA1P36163 345 aa5.54□□□□□ -1.52
VPS25YJR102C UGA2P38067 497 aa5.54□□□□□ -1.52
VPS25YJR102C TAT2P38967 592 aa5.54□□□□□ -1.52
VPS25YJR102C PIK1P39104 1066 aa5.54□□□□□ -1.52
VPS25YJR102C IOC3P43596 787 aa5.54□□□□□ -1.52
VPS25YJR102C HUL5P53119 910 aa5.54□□□□□ -1.52
VPS25YJR102C NSE3Q05541 303 aa5.54□□□□□ -1.52
VPS25YJR102C YDR306CQ06640 478 aa5.54□□□□□ -1.52
VPS25YJR102C YOR131CQ12486 218 aa5.54□□□□□ -1.52
VPS25YJR102C YTA7P40340 1379 aa5.54□□□□□ -1.52
VPS25YJR102C STI1P15705 589 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
VPS25YJR102C PRP9P19736 530 aaKnown RBP5.53□□□□□ -1.52
VPS25YJR102C ARE1P25628 610 aa5.53□□□□□ -1.52
VPS25YJR102C BAP2P38084 609 aa5.53□□□□□ -1.52
VPS25YJR102C ALR2P43553 858 aa5.53□□□□□ -1.52
VPS25YJR102C YGR125WP53273 1036 aa5.53□□□□□ -1.52
VPS25YJR102C DUS3Q06053 668 aaKnown RBP5.53□□□□□ -1.52
VPS25YJR102C EAF1Q06337 982 aa5.53□□□□□ -1.52
VPS25YJR102C BDF2Q07442 638 aa5.53□□□□□ -1.52
VPS25YJR102C RSC58Q07979 502 aa5.53□□□□□ -1.52
VPS25YJR102C RPL8BP29453 256 aaKnown RBP5.52□□□□□ -1.53
VPS25YJR102C PPH3P32345 308 aa5.52□□□□□ -1.53
VPS25YJR102C MAC1P35192 417 aa5.52□□□□□ -1.53
VPS25YJR102C GEM1P39722 662 aa5.52□□□□□ -1.53
VPS25YJR102C FOL2P51601 243 aaKnown RBP5.52□□□□□ -1.53
VPS25YJR102C ERP6P53198 216 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms