RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	RPN3	P40016	523 aa	Known RBP	3.41	□□□□□ -1.86
NUP82	YJL061W	EAR1	Q03212	550 aa		3.41	□□□□□ -1.86
NUP82	YJL061W	YLR225C	Q05948	407 aa	Known RBP	3.41	□□□□□ -1.86
NUP82	YJL061W	YVC1	Q12324	675 aa		3.41	□□□□□ -1.86
NUP82	YJL061W	YHL012W	P38709	493 aa		3.41	□□□□□ -1.86
NUP82	YJL061W	GPB2	P39717	880 aa		3.41	□□□□□ -1.86
NUP82	YJL061W	SPF1	P39986	1215 aa	Known RBP	3.41	□□□□□ -1.86
NUP82	YJL061W	TNA1	P53322	534 aa		3.41	□□□□□ -1.86
NUP82	YJL061W	SHE9	Q04172	456 aa		3.41	□□□□□ -1.86
NUP82	YJL061W	ABD1	P32783	436 aa	Predicted RBP	3.4	□□□□□ -1.86
NUP82	YJL061W	YSC84	P32793	468 aa		3.4	□□□□□ -1.86
NUP82	YJL061W	SEA4	P38164	1038 aa		3.4	□□□□□ -1.86
NUP82	YJL061W	YGL176C	P46945	554 aa		3.4	□□□□□ -1.86
NUP82	YJL061W	YGR130C	P53278	816 aa		3.4	□□□□□ -1.86
NUP82	YJL061W	NAN1	Q02931	896 aa	Known RBP	3.4	□□□□□ -1.86
NUP82	YJL061W	HOS3	Q02959	697 aa	Known RBP	3.4	□□□□□ -1.86
NUP82	YJL061W	SPP382	Q06411	708 aa	Predicted RBP	3.4	□□□□□ -1.86
NUP82	YJL061W	MED7	Q08278	222 aa		3.4	□□□□□ -1.86
NUP82	YJL061W	SRO9	P25567	434 aa	Known RBP	3.4	□□□□□ -1.87
NUP82	YJL061W	MDL2	P33311	773 aa		3.4	□□□□□ -1.87
NUP82	YJL061W	MRP8	P35719	219 aa		3.4	□□□□□ -1.87
NUP82	YJL061W	YKL069W	P36088	180 aa		3.4	□□□□□ -1.87
NUP82	YJL061W	CCZ1	P38273	704 aa		3.4	□□□□□ -1.87
NUP82	YJL061W	OYE3	P41816	400 aa	Predicted RBP	3.4	□□□□□ -1.87
NUP82	YJL061W	CYC7	P00045	113 aa		3.39	□□□□□ -1.87
NUP82	YJL061W	YER152C	P10356	443 aa		3.39	□□□□□ -1.87
NUP82	YJL061W	GRX1	P25373	110 aa	Known RBP	3.39	□□□□□ -1.87
NUP82	YJL061W	ESC2	Q06340	456 aa		3.39	□□□□□ -1.87
NUP82	YJL061W	NBA1	Q08229	501 aa	Known RBP	3.39	□□□□□ -1.87
NUP82	YJL061W	TRE1	Q08919	783 aa		3.39	□□□□□ -1.87
NUP82	YJL061W	SBP1	P10080	294 aa	Known RBP	3.38	□□□□□ -1.87
NUP82	YJL061W	VBA5	P36172	582 aa		3.38	□□□□□ -1.87
NUP82	YJL061W	OCA5	P38738	679 aa		3.38	□□□□□ -1.87
NUP82	YJL061W	YPL066W	Q12194	479 aa		3.38	□□□□□ -1.87
NUP82	YJL061W	SAM35	P14693	329 aa		3.38	□□□□□ -1.87
NUP82	YJL061W	PIK1	P39104	1066 aa		3.38	□□□□□ -1.87
NUP82	YJL061W	YOL098C	Q12496	1037 aa		3.38	□□□□□ -1.87
NUP82	YJL061W	TRP3	P00937	484 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	RPL11A	P0C0W9	174 aa	Known RBP	3.37	□□□□□ -1.87
NUP82	YJL061W	SCT1	P32784	759 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	BAP2	P38084	609 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	PBY1	P38254	753 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	TOS1	P38288	455 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	PEX7	P39108	375 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	IRR1	P40541	1150 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
NUP82	YJL061W	SPO75	Q07798	868 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	RPL11B	Q3E757	174 aa	Predicted RBP	3.37	□□□□□ -1.87
NUP82	YJL061W	THS1	P04801	734 aa	Known RBP	3.37	□□□□□ -1.87
NUP82	YJL061W	GCD1	P09032	578 aa	Predicted RBP	3.37	□□□□□ -1.87
NUP82	YJL061W	SNF5	P18480	905 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	ADP1	P25371	1049 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	PRO1	P32264	428 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	YKR073C	P36153	106 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	PNT1	P38969	423 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	GEM1	P39722	662 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	RSB1	Q08417	382 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	ACM1	Q08981	209 aa		3.37	□□□□□ -1.87
NUP82	YJL061W	RAD4	P14736	754 aa		3.36	□□□□□ -1.87
NUP82	YJL061W	PRP9	P19736	530 aa	Known RBP	3.36	□□□□□ -1.87
NUP82	YJL061W	YBR184W	P38299	523 aa		3.36	□□□□□ -1.87
NUP82	YJL061W	PTC7	P38797	343 aa		3.36	□□□□□ -1.87
NUP82	YJL061W	TAT2	P38967	592 aa		3.36	□□□□□ -1.87
NUP82	YJL061W	SIP5	P40210	489 aa	Known RBP	3.36	□□□□□ -1.87
NUP82	YJL061W	GTS1	P40956	396 aa		3.36	□□□□□ -1.87
NUP82	YJL061W	SSY1	Q03770	852 aa		3.36	□□□□□ -1.87
NUP82	YJL061W	RSC58	Q07979	502 aa		3.36	□□□□□ -1.87
NUP82	YJL061W	YTA7	P40340	1379 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
NUP82	YJL061W	MBP1	P39678	833 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	MXR1	P40029	184 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	TIM54	P47045	478 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	TPO2	P53283	614 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	OSH2	Q12451	1283 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	SRP40	P32583	406 aa	Predicted RBP	3.35	□□□□□ -1.87
NUP82	YJL061W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
NUP82	YJL061W	AIM26	P32858	118 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	STE5	P32917	917 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	UGA2	P38067	497 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	FOL2	P51601	243 aa	Known RBP	3.35	□□□□□ -1.87
NUP82	YJL061W	ALO1	P54783	526 aa	Known RBP	3.35	□□□□□ -1.87
NUP82	YJL061W	NSE3	Q05541	303 aa		3.35	□□□□□ -1.87
NUP82	YJL061W	RCL1	Q08096	367 aa	Predicted RBP	3.35	□□□□□ -1.87
NUP82	YJL061W	CDC53	Q12018	815 aa	Known RBP	3.35	□□□□□ -1.87
NUP82	YJL061W	DBP2	P24783	546 aa	Known RBP	3.34	□□□□□ -1.87
NUP82	YJL061W	LIP5	P32875	414 aa		3.34	□□□□□ -1.87
NUP82	YJL061W	SLA2	P33338	968 aa		3.34	□□□□□ -1.87
NUP82	YJL061W	OMA1	P36163	345 aa		3.34	□□□□□ -1.87
NUP82	YJL061W	ERP6	P53198	216 aa		3.34	□□□□□ -1.87
NUP82	YJL061W	SDH1	Q00711	640 aa		3.34	□□□□□ -1.87
NUP82	YJL061W	SRP1	Q02821	542 aa	Known RBP	3.34	□□□□□ -1.87
NUP82	YJL061W	FMP25	Q08023	583 aa		3.34	□□□□□ -1.87
NUP82	YJL061W	YOR131C	Q12486	218 aa		3.34	□□□□□ -1.87
NUP82	YJL061W	SPS1	P08458	490 aa		3.34	□□□□□ -1.88
NUP82	YJL061W	YFL054C	P43549	646 aa		3.34	□□□□□ -1.88
NUP82	YJL061W	IOC3	P43596	787 aa		3.34	□□□□□ -1.88
NUP82	YJL061W	ENV11	P53246	860 aa		3.34	□□□□□ -1.88
NUP82	YJL061W	BDF2	Q07442	638 aa		3.34	□□□□□ -1.88
NUP82	YJL061W	BRE4	Q07660	1125 aa		3.34	□□□□□ -1.88
NUP82	YJL061W	HSP60	P19882	572 aa	Known RBP	3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms