RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP82YJL061W RPN3P40016 523 aaKnown RBP3.41□□□□□ -1.86
NUP82YJL061W EAR1Q03212 550 aa3.41□□□□□ -1.86
NUP82YJL061W YLR225CQ05948 407 aaKnown RBP3.41□□□□□ -1.86
NUP82YJL061W YVC1Q12324 675 aa3.41□□□□□ -1.86
NUP82YJL061W YHL012WP38709 493 aa3.41□□□□□ -1.86
NUP82YJL061W GPB2P39717 880 aa3.41□□□□□ -1.86
NUP82YJL061W SPF1P39986 1215 aaKnown RBP3.41□□□□□ -1.86
NUP82YJL061W TNA1P53322 534 aa3.41□□□□□ -1.86
NUP82YJL061W SHE9Q04172 456 aa3.41□□□□□ -1.86
NUP82YJL061W ABD1P32783 436 aaPredicted RBP3.4□□□□□ -1.86
NUP82YJL061W YSC84P32793 468 aa3.4□□□□□ -1.86
NUP82YJL061W SEA4P38164 1038 aa3.4□□□□□ -1.86
NUP82YJL061W YGL176CP46945 554 aa3.4□□□□□ -1.86
NUP82YJL061W YGR130CP53278 816 aa3.4□□□□□ -1.86
NUP82YJL061W NAN1Q02931 896 aaKnown RBP3.4□□□□□ -1.86
NUP82YJL061W HOS3Q02959 697 aaKnown RBP3.4□□□□□ -1.86
NUP82YJL061W SPP382Q06411 708 aaPredicted RBP3.4□□□□□ -1.86
NUP82YJL061W MED7Q08278 222 aa3.4□□□□□ -1.86
NUP82YJL061W SRO9P25567 434 aaKnown RBP3.4□□□□□ -1.87
NUP82YJL061W MDL2P33311 773 aa3.4□□□□□ -1.87
NUP82YJL061W MRP8P35719 219 aa3.4□□□□□ -1.87
NUP82YJL061W YKL069WP36088 180 aa3.4□□□□□ -1.87
NUP82YJL061W CCZ1P38273 704 aa3.4□□□□□ -1.87
NUP82YJL061W OYE3P41816 400 aaPredicted RBP3.4□□□□□ -1.87
NUP82YJL061W CYC7P00045 113 aa3.39□□□□□ -1.87
NUP82YJL061W YER152CP10356 443 aa3.39□□□□□ -1.87
NUP82YJL061W GRX1P25373 110 aaKnown RBP3.39□□□□□ -1.87
NUP82YJL061W ESC2Q06340 456 aa3.39□□□□□ -1.87
NUP82YJL061W NBA1Q08229 501 aaKnown RBP3.39□□□□□ -1.87
NUP82YJL061W TRE1Q08919 783 aa3.39□□□□□ -1.87
NUP82YJL061W SBP1P10080 294 aaKnown RBP3.38□□□□□ -1.87
NUP82YJL061W VBA5P36172 582 aa3.38□□□□□ -1.87
NUP82YJL061W OCA5P38738 679 aa3.38□□□□□ -1.87
NUP82YJL061W YPL066WQ12194 479 aa3.38□□□□□ -1.87
NUP82YJL061W SAM35P14693 329 aa3.38□□□□□ -1.87
NUP82YJL061W PIK1P39104 1066 aa3.38□□□□□ -1.87
NUP82YJL061W YOL098CQ12496 1037 aa3.38□□□□□ -1.87
NUP82YJL061W TRP3P00937 484 aa3.37□□□□□ -1.87
NUP82YJL061W RPL11AP0C0W9 174 aaKnown RBP3.37□□□□□ -1.87
NUP82YJL061W SCT1P32784 759 aa3.37□□□□□ -1.87
NUP82YJL061W BAP2P38084 609 aa3.37□□□□□ -1.87
NUP82YJL061W PBY1P38254 753 aa3.37□□□□□ -1.87
NUP82YJL061W TOS1P38288 455 aa3.37□□□□□ -1.87
NUP82YJL061W PEX7P39108 375 aa3.37□□□□□ -1.87
NUP82YJL061W IRR1P40541 1150 aa3.37□□□□□ -1.87
NUP82YJL061W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
NUP82YJL061W SPO75Q07798 868 aa3.37□□□□□ -1.87
NUP82YJL061W RPL11BQ3E757 174 aaPredicted RBP3.37□□□□□ -1.87
NUP82YJL061W THS1P04801 734 aaKnown RBP3.37□□□□□ -1.87
NUP82YJL061W GCD1P09032 578 aaPredicted RBP3.37□□□□□ -1.87
NUP82YJL061W SNF5P18480 905 aa3.37□□□□□ -1.87
NUP82YJL061W ADP1P25371 1049 aa3.37□□□□□ -1.87
NUP82YJL061W PRO1P32264 428 aa3.37□□□□□ -1.87
NUP82YJL061W YKR073CP36153 106 aa3.37□□□□□ -1.87
NUP82YJL061W PNT1P38969 423 aa3.37□□□□□ -1.87
NUP82YJL061W GEM1P39722 662 aa3.37□□□□□ -1.87
NUP82YJL061W RSB1Q08417 382 aa3.37□□□□□ -1.87
NUP82YJL061W ACM1Q08981 209 aa3.37□□□□□ -1.87
NUP82YJL061W RAD4P14736 754 aa3.36□□□□□ -1.87
NUP82YJL061W PRP9P19736 530 aaKnown RBP3.36□□□□□ -1.87
NUP82YJL061W YBR184WP38299 523 aa3.36□□□□□ -1.87
NUP82YJL061W PTC7P38797 343 aa3.36□□□□□ -1.87
NUP82YJL061W TAT2P38967 592 aa3.36□□□□□ -1.87
NUP82YJL061W SIP5P40210 489 aaKnown RBP3.36□□□□□ -1.87
NUP82YJL061W GTS1P40956 396 aa3.36□□□□□ -1.87
NUP82YJL061W SSY1Q03770 852 aa3.36□□□□□ -1.87
NUP82YJL061W RSC58Q07979 502 aa3.36□□□□□ -1.87
NUP82YJL061W YTA7P40340 1379 aa3.35□□□□□ -1.87
NUP82YJL061W STI1P15705 589 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
NUP82YJL061W MBP1P39678 833 aa3.35□□□□□ -1.87
NUP82YJL061W MXR1P40029 184 aa3.35□□□□□ -1.87
NUP82YJL061W TIM54P47045 478 aa3.35□□□□□ -1.87
NUP82YJL061W TPO2P53283 614 aa3.35□□□□□ -1.87
NUP82YJL061W OSH2Q12451 1283 aa3.35□□□□□ -1.87
NUP82YJL061W SRP40P32583 406 aaPredicted RBP3.35□□□□□ -1.87
NUP82YJL061W PUB1P32588 453 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
NUP82YJL061W AIM26P32858 118 aa3.35□□□□□ -1.87
NUP82YJL061W STE5P32917 917 aa3.35□□□□□ -1.87
NUP82YJL061W UGA2P38067 497 aa3.35□□□□□ -1.87
NUP82YJL061W FOL2P51601 243 aaKnown RBP3.35□□□□□ -1.87
NUP82YJL061W ALO1P54783 526 aaKnown RBP3.35□□□□□ -1.87
NUP82YJL061W NSE3Q05541 303 aa3.35□□□□□ -1.87
NUP82YJL061W RCL1Q08096 367 aaPredicted RBP3.35□□□□□ -1.87
NUP82YJL061W CDC53Q12018 815 aaKnown RBP3.35□□□□□ -1.87
NUP82YJL061W DBP2P24783 546 aaKnown RBP3.34□□□□□ -1.87
NUP82YJL061W LIP5P32875 414 aa3.34□□□□□ -1.87
NUP82YJL061W SLA2P33338 968 aa3.34□□□□□ -1.87
NUP82YJL061W OMA1P36163 345 aa3.34□□□□□ -1.87
NUP82YJL061W ERP6P53198 216 aa3.34□□□□□ -1.87
NUP82YJL061W SDH1Q00711 640 aa3.34□□□□□ -1.87
NUP82YJL061W SRP1Q02821 542 aaKnown RBP3.34□□□□□ -1.87
NUP82YJL061W FMP25Q08023 583 aa3.34□□□□□ -1.87
NUP82YJL061W YOR131CQ12486 218 aa3.34□□□□□ -1.87
NUP82YJL061W SPS1P08458 490 aa3.34□□□□□ -1.88
NUP82YJL061W YFL054CP43549 646 aa3.34□□□□□ -1.88
NUP82YJL061W IOC3P43596 787 aa3.34□□□□□ -1.88
NUP82YJL061W ENV11P53246 860 aa3.34□□□□□ -1.88
NUP82YJL061W BDF2Q07442 638 aa3.34□□□□□ -1.88
NUP82YJL061W BRE4Q07660 1125 aa3.34□□□□□ -1.88
NUP82YJL061W HSP60P19882 572 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms