RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W HEM13P11353 328 aaKnown RBP5.41□□□□□ -1.54
PTI1YGR156W SSF1P38789 453 aaPredicted RBP5.41□□□□□ -1.54
PTI1YGR156W RPN3P40016 523 aaKnown RBP5.41□□□□□ -1.54
PTI1YGR156W RSM24Q03976 319 aa5.41□□□□□ -1.54
PTI1YGR156W PNS1Q12412 539 aa5.41□□□□□ -1.54
PTI1YGR156W AFG2P32794 780 aa5.4□□□□□ -1.54
PTI1YGR156W RPT1P33299 467 aaKnown RBP5.4□□□□□ -1.54
PTI1YGR156W ROT1Q03691 256 aa5.4□□□□□ -1.54
PTI1YGR156W YDR132CQ03900 495 aa5.4□□□□□ -1.54
PTI1YGR156W TOS4Q06266 489 aa5.4□□□□□ -1.54
PTI1YGR156W PRE9P23638 258 aaKnown RBP5.39□□□□□ -1.55
PTI1YGR156W RFC5P38251 354 aa5.39□□□□□ -1.55
PTI1YGR156W FAA3P39002 694 aa5.39□□□□□ -1.55
PTI1YGR156W MRPS18P42847 217 aa5.39□□□□□ -1.55
PTI1YGR156W MCD1Q12158 566 aa5.39□□□□□ -1.55
PTI1YGR156W SPO21Q12411 609 aa5.39□□□□□ -1.55
PTI1YGR156W HXK1P04806 485 aaKnown RBP5.38□□□□□ -1.55
PTI1YGR156W SEC20P28791 383 aa5.38□□□□□ -1.55
PTI1YGR156W YPT53P36019 220 aa5.38□□□□□ -1.55
PTI1YGR156W SEN54Q02825 467 aaPredicted RBP5.38□□□□□ -1.55
PTI1YGR156W SLD2P34252 453 aa5.37□□□□□ -1.55
PTI1YGR156W PIC2P40035 300 aa5.37□□□□□ -1.55
PTI1YGR156W PBP1P53297 722 aaKnown RBP5.37□□□□□ -1.55
PTI1YGR156W SNF5P18480 905 aa5.36□□□□□ -1.55
PTI1YGR156W DOM34P33309 386 aa5.36□□□□□ -1.55
PTI1YGR156W RXT3Q07458 294 aa5.36□□□□□ -1.55
PTI1YGR156W WHI5Q12416 295 aa5.36□□□□□ -1.55
PTI1YGR156W KIN2P13186 1147 aaKnown RBP5.35□□□□□ -1.55
PTI1YGR156W CMP2P14747 604 aa5.34□□□□□ -1.55
PTI1YGR156W ENT3P47160 408 aa5.34□□□□□ -1.55
PTI1YGR156W URN1Q06525 465 aaKnown RBP5.34□□□□□ -1.55
PTI1YGR156W HEM3P28789 327 aa5.33□□□□□ -1.56
PTI1YGR156W TRM2P33753 639 aa5.33□□□□□ -1.56
PTI1YGR156W YGR122WP53272 402 aa5.33□□□□□ -1.56
PTI1YGR156W RAT1Q02792 1006 aaKnown RBP5.33□□□□□ -1.56
PTI1YGR156W ROD1Q02805 837 aa5.33□□□□□ -1.56
PTI1YGR156W PLB2Q03674 706 aa5.33□□□□□ -1.56
PTI1YGR156W DUS4Q06063 367 aa5.33□□□□□ -1.56
PTI1YGR156W GAL10P04397 699 aa5.32□□□□□ -1.56
PTI1YGR156W MKK2P32491 506 aa5.32□□□□□ -1.56
PTI1YGR156W SEC8P32855 1065 aa5.32□□□□□ -1.56
PTI1YGR156W RGD1P38339 666 aa5.32□□□□□ -1.56
PTI1YGR156W SIW14P53965 281 aa5.32□□□□□ -1.56
PTI1YGR156W ACK1Q07622 623 aaPredicted RBP5.32□□□□□ -1.56
PTI1YGR156W GPB1Q08886 897 aa5.32□□□□□ -1.56
PTI1YGR156W SVS1Q12254 260 aa5.32□□□□□ -1.56
PTI1YGR156W MON2P48563 1636 aaPredicted RBP5.32□□□□□ -1.56
PTI1YGR156W APL1P27351 700 aa5.31□□□□□ -1.56
PTI1YGR156W MNN10P50108 393 aaKnown RBP5.31□□□□□ -1.56
PTI1YGR156W SYP1P25623 870 aaKnown RBP5.3□□□□□ -1.56
PTI1YGR156W ORC1P54784 914 aaPredicted RBP5.3□□□□□ -1.56
PTI1YGR156W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
PTI1YGR156W INO80P53115 1489 aa5.3□□□□□ -1.56
PTI1YGR156W RAD2P07276 1031 aa5.29□□□□□ -1.56
PTI1YGR156W STE11P23561 717 aa5.29□□□□□ -1.56
PTI1YGR156W HCM1P25364 564 aa5.29□□□□□ -1.56
PTI1YGR156W CDC20P26309 610 aa5.29□□□□□ -1.56
PTI1YGR156W IPL1P38991 367 aa5.29□□□□□ -1.56
PTI1YGR156W MCM6P53091 1017 aaKnown RBP5.29□□□□□ -1.56
PTI1YGR156W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
PTI1YGR156W PUS9Q12069 462 aa5.29□□□□□ -1.56
PTI1YGR156W SRM1P21827 482 aa5.28□□□□□ -1.56
PTI1YGR156W MLS1P30952 554 aa5.28□□□□□ -1.56
PTI1YGR156W CNN1P43618 361 aa5.28□□□□□ -1.56
PTI1YGR156W MSE1P48525 536 aa5.28□□□□□ -1.56
PTI1YGR156W MRL1Q06815 381 aa5.28□□□□□ -1.56
PTI1YGR156W YER152CP10356 443 aa5.27□□□□□ -1.57
PTI1YGR156W PAM1P37304 830 aaKnown RBP5.27□□□□□ -1.57
PTI1YGR156W MGE1P38523 228 aa5.27□□□□□ -1.57
PTI1YGR156W RAD27P26793 382 aa5.26□□□□□ -1.57
PTI1YGR156W LST4P34239 828 aa5.26□□□□□ -1.57
PTI1YGR156W RPS26AP39938 119 aaKnown RBP5.26□□□□□ -1.57
PTI1YGR156W RPS26BP39939 119 aaKnown RBP5.26□□□□□ -1.57
PTI1YGR156W YFL054CP43549 646 aa5.26□□□□□ -1.57
PTI1YGR156W GTF1P53260 183 aaPredicted RBP5.26□□□□□ -1.57
PTI1YGR156W TMA10Q06177 86 aa5.26□□□□□ -1.57
PTI1YGR156W CYC8P14922 966 aa5.25□□□□□ -1.57
PTI1YGR156W SNU71P53207 620 aaKnown RBP5.25□□□□□ -1.57
PTI1YGR156W ATG13Q06628 738 aa5.25□□□□□ -1.57
PTI1YGR156W DBP5P20449 482 aaKnown RBP5.24□□□□□ -1.57
PTI1YGR156W BAS1P22035 811 aa5.24□□□□□ -1.57
PTI1YGR156W HXT13P39924 564 aa5.24□□□□□ -1.57
PTI1YGR156W HXT17P53631 564 aa5.24□□□□□ -1.57
PTI1YGR156W HXT15P54854 567 aa5.24□□□□□ -1.57
PTI1YGR156W SIZ1Q04195 904 aa5.24□□□□□ -1.57
PTI1YGR156W RRP15Q06511 250 aaPredicted RBP5.24□□□□□ -1.57
PTI1YGR156W GCR1P07261 785 aa5.23□□□□□ -1.57
PTI1YGR156W NTO1Q12311 748 aa5.23□□□□□ -1.57
PTI1YGR156W THS1P04801 734 aaKnown RBP5.22□□□□□ -1.57
PTI1YGR156W PMI40P29952 429 aaKnown RBP5.22□□□□□ -1.57
PTI1YGR156W VPS62P53285 467 aa5.22□□□□□ -1.57
PTI1YGR156W SLI1P53304 468 aa5.22□□□□□ -1.57
PTI1YGR156W SUN4P53616 420 aa5.22□□□□□ -1.57
PTI1YGR156W MSC2Q03455 724 aa5.22□□□□□ -1.57
PTI1YGR156W YLR224WQ05947 369 aa5.22□□□□□ -1.57
PTI1YGR156W RIB2Q12362 591 aaKnown RBP5.22□□□□□ -1.57
PTI1YGR156W CDC6P09119 513 aa5.21□□□□□ -1.58
PTI1YGR156W ACE2P21192 770 aa5.21□□□□□ -1.58
PTI1YGR156W EMC1P25574 760 aa5.21□□□□□ -1.58
PTI1YGR156W UGA2P38067 497 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms