RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W MET7Q08645 548 aa8.78□□□□□ -1
UFD1YGR048W SLX4Q12098 748 aa8.78□□□□□ -1
UFD1YGR048W AIM7Q12156 149 aa8.78□□□□□ -1
UFD1YGR048W MMP1Q12372 583 aa8.78□□□□□ -1
UFD1YGR048W CPA2P03965 1118 aaKnown RBP8.77□□□□□ -1.01
UFD1YGR048W RPS19AP07280 144 aaKnown RBP8.77□□□□□ -1.01
UFD1YGR048W RPS19BP07281 144 aaPredicted RBP8.77□□□□□ -1.01
UFD1YGR048W TYR1P20049 452 aa8.77□□□□□ -1.01
UFD1YGR048W IME1P21190 360 aa8.77□□□□□ -1.01
UFD1YGR048W STO1P34160 861 aaKnown RBP8.77□□□□□ -1.01
UFD1YGR048W NUP60P39705 539 aa8.77□□□□□ -1.01
UFD1YGR048W VID27P40157 782 aa8.77□□□□□ -1.01
UFD1YGR048W TAF1P46677 1066 aa8.77□□□□□ -1.01
UFD1YGR048W CTF18P49956 741 aa8.77□□□□□ -1.01
UFD1YGR048W SHE10P53075 577 aa8.77□□□□□ -1.01
UFD1YGR048W SUB1P54000 292 aaKnown RBP8.77□□□□□ -1.01
UFD1YGR048W YLR177WQ06251 628 aa8.77□□□□□ -1.01
UFD1YGR048W CFT2Q12102 859 aaPredicted RBP8.77□□□□□ -1.01
UFD1YGR048W YPL150WQ12152 901 aa8.77□□□□□ -1.01
UFD1YGR048W SUI3P09064 285 aaKnown RBP8.76□□□□□ -1.01
UFD1YGR048W GLN1P32288 370 aaKnown RBP8.76□□□□□ -1.01
UFD1YGR048W RPN2P32565 945 aaKnown RBP8.76□□□□□ -1.01
UFD1YGR048W SEG2P34250 1132 aa8.76□□□□□ -1.01
UFD1YGR048W PIM1P36775 1133 aa8.76□□□□□ -1.01
UFD1YGR048W PPX1P38698 397 aa8.76□□□□□ -1.01
UFD1YGR048W CCC2P38995 1004 aa8.76□□□□□ -1.01
UFD1YGR048W SHC1P39000 512 aa8.76□□□□□ -1.01
UFD1YGR048W GYP7P48365 746 aa8.76□□□□□ -1.01
UFD1YGR048W NOP6Q07623 225 aaKnown RBP8.76□□□□□ -1.01
UFD1YGR048W VPS5Q92331 675 aa8.76□□□□□ -1.01
UFD1YGR048W NOC2P39744 710 aaKnown RBP8.75□□□□□ -1.01
UFD1YGR048W MDJ2P42834 146 aa8.75□□□□□ -1.01
UFD1YGR048W ARI1P53111 347 aaKnown RBP8.75□□□□□ -1.01
UFD1YGR048W YNL247WP53852 767 aaKnown RBP8.75□□□□□ -1.01
UFD1YGR048W BOP3P53958 396 aa8.75□□□□□ -1.01
UFD1YGR048W ADA2Q02336 434 aa8.75□□□□□ -1.01
UFD1YGR048W VPS38Q05919 439 aa8.75□□□□□ -1.01
UFD1YGR048W SLK19Q08581 821 aaKnown RBP8.75□□□□□ -1.01
UFD1YGR048W NUR1Q12066 484 aa8.75□□□□□ -1.01
UFD1YGR048W JIP3O13555 125 aa8.74□□□□□ -1.01
UFD1YGR048W PHO13P19881 312 aa8.74□□□□□ -1.01
UFD1YGR048W CNS1P33313 385 aa8.74□□□□□ -1.01
UFD1YGR048W PXL1P36166 706 aa8.74□□□□□ -1.01
UFD1YGR048W PSY4P38193 441 aa8.74□□□□□ -1.01
UFD1YGR048W GVP36P40531 326 aaKnown RBP8.74□□□□□ -1.01
UFD1YGR048W TBF1Q02457 562 aa8.74□□□□□ -1.01
UFD1YGR048W FMP30Q02883 468 aa8.74□□□□□ -1.01
UFD1YGR048W PUS5Q06244 254 aa8.74□□□□□ -1.01
UFD1YGR048W ELG1Q12050 791 aa8.74□□□□□ -1.01
UFD1YGR048W NUP188P52593 1655 aaKnown RBP8.73□□□□□ -1.01
UFD1YGR048W ADE3P07245 946 aaKnown RBP8.73□□□□□ -1.01
UFD1YGR048W MOD5P07884 428 aa8.73□□□□□ -1.01
UFD1YGR048W RRP43P25359 394 aaPredicted RBP8.73□□□□□ -1.01
UFD1YGR048W CPS1P27614 576 aa8.73□□□□□ -1.01
UFD1YGR048W YJU3P28321 313 aa8.73□□□□□ -1.01
UFD1YGR048W CSE1P33307 960 aa8.73□□□□□ -1.01
UFD1YGR048W ARB1P40024 610 aaKnown RBP8.73□□□□□ -1.01
UFD1YGR048W SRT1Q03175 343 aa8.73□□□□□ -1.01
UFD1YGR048W SPC24Q04477 213 aa8.73□□□□□ -1.01
UFD1YGR048W SPN1Q06505 410 aaPredicted RBP8.73□□□□□ -1.01
UFD1YGR048W PSK2Q08217 1101 aa8.73□□□□□ -1.01
UFD1YGR048W TRM1P15565 570 aaKnown RBP8.72□□□□□ -1.01
UFD1YGR048W KTR1P27810 393 aaKnown RBP8.72□□□□□ -1.01
UFD1YGR048W GCD7P32502 381 aaPredicted RBP8.72□□□□□ -1.01
UFD1YGR048W LOS1P33418 1100 aaPredicted RBP8.72□□□□□ -1.01
UFD1YGR048W YEL1P34225 687 aa8.72□□□□□ -1.01
UFD1YGR048W MAL33P38157 468 aa8.72□□□□□ -1.01
UFD1YGR048W AMN1P38285 549 aaPredicted RBP8.72□□□□□ -1.01
UFD1YGR048W YIR042CP40586 236 aa8.72□□□□□ -1.01
UFD1YGR048W DSL1P53847 754 aa8.72□□□□□ -1.01
UFD1YGR048W ATG26Q06321 1198 aa8.72□□□□□ -1.01
UFD1YGR048W HIM1Q06674 414 aa8.72□□□□□ -1.01
UFD1YGR048W PSR1Q07800 427 aa8.72□□□□□ -1.01
UFD1YGR048W YDL206WQ12424 762 aa8.72□□□□□ -1.01
UFD1YGR048W OCA6Q12454 224 aa8.72□□□□□ -1.01
UFD1YGR048W RMP1Q12530 201 aa8.72□□□□□ -1.01
UFD1YGR048W PDC1P06169 563 aaKnown RBP8.71□□□□□ -1.02
UFD1YGR048W SEC23P15303 768 aaKnown RBP8.71□□□□□ -1.02
UFD1YGR048W UGA3P26370 528 aa8.71□□□□□ -1.02
UFD1YGR048W YKT6P36015 200 aaKnown RBP8.71□□□□□ -1.02
UFD1YGR048W RFT1P38206 574 aaPredicted RBP8.71□□□□□ -1.02
UFD1YGR048W REV7P38927 245 aa8.71□□□□□ -1.02
UFD1YGR048W SYG1P40528 902 aa8.71□□□□□ -1.02
UFD1YGR048W INA22P40576 216 aa8.71□□□□□ -1.02
UFD1YGR048W SET2P46995 733 aaKnown RBP8.71□□□□□ -1.02
UFD1YGR048W KXD1P53158 218 aa8.71□□□□□ -1.02
UFD1YGR048W RCF1Q03713 159 aa8.71□□□□□ -1.02
UFD1YGR048W MAG2Q06436 670 aaKnown RBP8.71□□□□□ -1.02
UFD1YGR048W VAC14Q06708 880 aa8.71□□□□□ -1.02
UFD1YGR048W BCK1Q01389 1478 aa8.7□□□□□ -1.02
UFD1YGR048W SEC7P11075 2009 aaKnown RBP8.7□□□□□ -1.02
UFD1YGR048W PET122P10355 254 aa8.7□□□□□ -1.02
UFD1YGR048W KIN1P13185 1064 aa8.7□□□□□ -1.02
UFD1YGR048W RPC19P28000 142 aaKnown RBP8.7□□□□□ -1.02
UFD1YGR048W PTH2P34222 208 aa8.7□□□□□ -1.02
UFD1YGR048W AAP1P37898 856 aaKnown RBP8.7□□□□□ -1.02
UFD1YGR048W SPO22P40511 975 aa8.7□□□□□ -1.02
UFD1YGR048W GPD2P41911 440 aaKnown RBP8.7□□□□□ -1.02
UFD1YGR048W STB1P42845 420 aa8.7□□□□□ -1.02
UFD1YGR048W RBL2P48606 106 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms