RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W SPO21Q12411 609 aa3.9□□□□□ -1.79
NIC96YFR002W SNF5P18480 905 aa3.89□□□□□ -1.79
NIC96YFR002W RER2P35196 286 aa3.89□□□□□ -1.79
NIC96YFR002W CDA2Q06703 312 aa3.89□□□□□ -1.79
NIC96YFR002W DBP5P20449 482 aaKnown RBP3.89□□□□□ -1.79
NIC96YFR002W YFL054CP43549 646 aa3.89□□□□□ -1.79
NIC96YFR002W CNN1P43618 361 aa3.89□□□□□ -1.79
NIC96YFR002W HOS3Q02959 697 aaKnown RBP3.89□□□□□ -1.79
NIC96YFR002W AIM26P32858 118 aa3.88□□□□□ -1.79
NIC96YFR002W RGD1P38339 666 aa3.88□□□□□ -1.79
NIC96YFR002W RPN3P40016 523 aaKnown RBP3.88□□□□□ -1.79
NIC96YFR002W NIT1P40447 199 aa3.88□□□□□ -1.79
NIC96YFR002W MPH1P40562 993 aa3.88□□□□□ -1.79
NIC96YFR002W GAS1P22146 559 aaKnown RBP3.88□□□□□ -1.79
NIC96YFR002W MLS1P30952 554 aa3.88□□□□□ -1.79
NIC96YFR002W TNA1P53322 534 aa3.88□□□□□ -1.79
NIC96YFR002W COQ4O13525 335 aa3.87□□□□□ -1.79
NIC96YFR002W YER152CP10356 443 aa3.87□□□□□ -1.79
NIC96YFR002W PET112P33893 541 aa3.87□□□□□ -1.79
NIC96YFR002W ETP1P38748 585 aaKnown RBP3.87□□□□□ -1.79
NIC96YFR002W EEB1Q02891 456 aa3.87□□□□□ -1.79
NIC96YFR002W TIF35Q04067 274 aaKnown RBP3.87□□□□□ -1.79
NIC96YFR002W CDC34P14682 295 aa3.87□□□□□ -1.79
NIC96YFR002W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
NIC96YFR002W PIK1P39104 1066 aa3.86□□□□□ -1.79
NIC96YFR002W RAD27P26793 382 aa3.86□□□□□ -1.79
NIC96YFR002W CCZ1P38273 704 aa3.86□□□□□ -1.79
NIC96YFR002W MET10P39692 1035 aa3.86□□□□□ -1.79
NIC96YFR002W NBA1Q08229 501 aaKnown RBP3.86□□□□□ -1.79
NIC96YFR002W TMA46Q12000 345 aaKnown RBP3.86□□□□□ -1.79
NIC96YFR002W ABZ1P37254 787 aaPredicted RBP3.85□□□□□ -1.79
NIC96YFR002W PRP43P53131 767 aaKnown RBP3.85□□□□□ -1.79
NIC96YFR002W TRP2P00899 507 aaKnown RBP3.85□□□□□ -1.79
NIC96YFR002W SPS1P08458 490 aa3.85□□□□□ -1.79
NIC96YFR002W MNR2P35724 969 aa3.85□□□□□ -1.79
NIC96YFR002W MRPL22P53881 309 aa3.85□□□□□ -1.79
NIC96YFR002W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
NIC96YFR002W LYP1P32487 611 aa3.84□□□□□ -1.79
NIC96YFR002W HNT2P49775 206 aa3.84□□□□□ -1.79
NIC96YFR002W PUF4P25339 888 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
NIC96YFR002W MCM7P38132 845 aa3.84□□□□□ -1.8
NIC96YFR002W UBP5P39944 805 aa3.84□□□□□ -1.8
NIC96YFR002W FOL2P51601 243 aaKnown RBP3.84□□□□□ -1.8
NIC96YFR002W THI80P35202 319 aa3.83□□□□□ -1.8
NIC96YFR002W GNT1Q12096 491 aa3.83□□□□□ -1.8
NIC96YFR002W YPL066WQ12194 479 aa3.83□□□□□ -1.8
NIC96YFR002W DBP2P24783 546 aaKnown RBP3.83□□□□□ -1.8
NIC96YFR002W SEC26P41810 973 aaKnown RBP3.83□□□□□ -1.8
NIC96YFR002W FAA4P47912 694 aaKnown RBP3.83□□□□□ -1.8
NIC96YFR002W MOT2P34909 587 aaKnown RBP3.82□□□□□ -1.8
NIC96YFR002W AIM3P38266 947 aaKnown RBP3.82□□□□□ -1.8
NIC96YFR002W MXR1P40029 184 aa3.82□□□□□ -1.8
NIC96YFR002W TYW3P53177 273 aa3.82□□□□□ -1.8
NIC96YFR002W YGR053CP53234 283 aa3.82□□□□□ -1.8
NIC96YFR002W RSB1Q08417 382 aa3.82□□□□□ -1.8
NIC96YFR002W RPL11AP0C0W9 174 aaKnown RBP3.82□□□□□ -1.8
NIC96YFR002W PRP6P19735 899 aaPredicted RBP3.82□□□□□ -1.8
NIC96YFR002W RIB2Q12362 591 aaKnown RBP3.82□□□□□ -1.8
NIC96YFR002W RPL11BQ3E757 174 aaPredicted RBP3.82□□□□□ -1.8
NIC96YFR002W INO1P11986 533 aa3.81□□□□□ -1.8
NIC96YFR002W BAS1P22035 811 aa3.81□□□□□ -1.8
NIC96YFR002W SNO2P53823 222 aa3.81□□□□□ -1.8
NIC96YFR002W PNT1P38969 423 aa3.81□□□□□ -1.8
NIC96YFR002W ENV11P53246 860 aa3.81□□□□□ -1.8
NIC96YFR002W ESC2Q06340 456 aa3.81□□□□□ -1.8
NIC96YFR002W VPS16Q03308 798 aa3.8□□□□□ -1.8
NIC96YFR002W PIN2Q12057 282 aa3.8□□□□□ -1.8
NIC96YFR002W CYC1P00044 109 aaPredicted RBP3.8□□□□□ -1.8
NIC96YFR002W SRM1P21827 482 aa3.8□□□□□ -1.8
NIC96YFR002W SLA2P33338 968 aa3.8□□□□□ -1.8
NIC96YFR002W SIP5P40210 489 aaKnown RBP3.8□□□□□ -1.8
NIC96YFR002W RIM8P53179 542 aa3.8□□□□□ -1.8
NIC96YFR002W YLR225CQ05948 407 aaKnown RBP3.8□□□□□ -1.8
NIC96YFR002W YPL277CQ08989 487 aa3.8□□□□□ -1.8
NIC96YFR002W RKM4Q12504 494 aa3.8□□□□□ -1.8
NIC96YFR002W SOD2P00447 233 aa3.79□□□□□ -1.8
NIC96YFR002W UGA2P38067 497 aa3.79□□□□□ -1.8
NIC96YFR002W GDE1Q02979 1223 aa3.79□□□□□ -1.8
NIC96YFR002W YDR132CQ03900 495 aa3.79□□□□□ -1.8
NIC96YFR002W ATG13Q06628 738 aa3.79□□□□□ -1.8
NIC96YFR002W ACM1Q08981 209 aa3.79□□□□□ -1.8
NIC96YFR002W SVS1Q12254 260 aa3.79□□□□□ -1.8
NIC96YFR002W RPS13P05756 151 aaKnown RBP3.79□□□□□ -1.8
NIC96YFR002W RFC5P38251 354 aa3.79□□□□□ -1.8
NIC96YFR002W YGL176CP46945 554 aa3.79□□□□□ -1.8
NIC96YFR002W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
NIC96YFR002W SVF1Q05515 481 aa3.79□□□□□ -1.8
NIC96YFR002W JIP5Q06214 492 aaPredicted RBP3.79□□□□□ -1.8
NIC96YFR002W TCB3Q03640 1545 aaKnown RBP3.78□□□□□ -1.8
NIC96YFR002W BI4P03879 638 aa3.78□□□□□ -1.8
NIC96YFR002W SGD1Q06132 899 aa3.78□□□□□ -1.8
NIC96YFR002W SPP382Q06411 708 aaPredicted RBP3.78□□□□□ -1.8
NIC96YFR002W CLN2P20438 545 aa3.78□□□□□ -1.8
NIC96YFR002W ACE2P21192 770 aa3.78□□□□□ -1.8
NIC96YFR002W YKL107WP34251 309 aa3.78□□□□□ -1.8
NIC96YFR002W LAM1P38851 1228 aa3.78□□□□□ -1.8
NIC96YFR002W PLB2Q03674 706 aa3.78□□□□□ -1.8
NIC96YFR002W SPO20Q04359 397 aa3.78□□□□□ -1.8
NIC96YFR002W ABD1P32783 436 aaPredicted RBP3.77□□□□□ -1.81
NIC96YFR002W GEM1P39722 662 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms