RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C THI80P35202 319 aa4.86□□□□□ -1.63
ASM4YDL088C ENV11P53246 860 aa4.86□□□□□ -1.63
ASM4YDL088C RPS13P05756 151 aaKnown RBP4.85□□□□□ -1.63
ASM4YDL088C YCR015CP25616 317 aa4.85□□□□□ -1.63
ASM4YDL088C TOD6P34219 525 aa4.85□□□□□ -1.63
ASM4YDL088C PIK1P39104 1066 aa4.85□□□□□ -1.63
ASM4YDL088C SPR28Q04921 423 aa4.85□□□□□ -1.63
ASM4YDL088C GCR1P07261 785 aa4.84□□□□□ -1.63
ASM4YDL088C SYP1P25623 870 aaKnown RBP4.84□□□□□ -1.63
ASM4YDL088C RAD27P26793 382 aa4.84□□□□□ -1.63
ASM4YDL088C HEM3P28789 327 aa4.84□□□□□ -1.63
ASM4YDL088C GIP4P39732 760 aa4.84□□□□□ -1.63
ASM4YDL088C RPN3P40016 523 aaKnown RBP4.84□□□□□ -1.63
ASM4YDL088C SEC26P41810 973 aaKnown RBP4.84□□□□□ -1.63
ASM4YDL088C ENT3P47160 408 aa4.84□□□□□ -1.63
ASM4YDL088C YPL277CQ08989 487 aa4.84□□□□□ -1.63
ASM4YDL088C SOD2P00447 233 aa4.83□□□□□ -1.64
ASM4YDL088C BAP2P38084 609 aa4.83□□□□□ -1.64
ASM4YDL088C TAF1P46677 1066 aa4.83□□□□□ -1.64
ASM4YDL088C ESF1Q06344 628 aaKnown RBP4.83□□□□□ -1.64
ASM4YDL088C MLS1P30952 554 aa4.82□□□□□ -1.64
ASM4YDL088C RGD1P38339 666 aa4.82□□□□□ -1.64
ASM4YDL088C FYV10P40492 516 aa4.82□□□□□ -1.64
ASM4YDL088C YJR107WP47145 328 aa4.82□□□□□ -1.64
ASM4YDL088C SGD1Q06132 899 aa4.82□□□□□ -1.64
ASM4YDL088C SNF5P18480 905 aa4.82□□□□□ -1.64
ASM4YDL088C FLR1P38124 548 aa4.82□□□□□ -1.64
ASM4YDL088C CNN1P43618 361 aa4.82□□□□□ -1.64
ASM4YDL088C HNT2P49775 206 aa4.82□□□□□ -1.64
ASM4YDL088C RSM24Q03976 319 aa4.82□□□□□ -1.64
ASM4YDL088C CYC1P00044 109 aaPredicted RBP4.81□□□□□ -1.64
ASM4YDL088C DBP5P20449 482 aaKnown RBP4.81□□□□□ -1.64
ASM4YDL088C HXT13P39924 564 aa4.81□□□□□ -1.64
ASM4YDL088C SPT20P50875 604 aa4.81□□□□□ -1.64
ASM4YDL088C HXT17P53631 564 aa4.81□□□□□ -1.64
ASM4YDL088C HXT15P54854 567 aa4.81□□□□□ -1.64
ASM4YDL088C YER152CP10356 443 aa4.8□□□□□ -1.64
ASM4YDL088C ASF1P32447 279 aa4.8□□□□□ -1.64
ASM4YDL088C MCM7P38132 845 aa4.8□□□□□ -1.64
ASM4YDL088C RFC5P38251 354 aa4.8□□□□□ -1.64
ASM4YDL088C LAM1P38851 1228 aa4.79□□□□□ -1.64
ASM4YDL088C YFL054CP43549 646 aa4.79□□□□□ -1.64
ASM4YDL088C GNP1P48813 663 aa4.79□□□□□ -1.64
ASM4YDL088C ROT1Q03691 256 aa4.79□□□□□ -1.64
ASM4YDL088C RTT10Q08924 1013 aa4.79□□□□□ -1.64
ASM4YDL088C YLR358CO13565 187 aa4.78□□□□□ -1.64
ASM4YDL088C OYE2Q03558 400 aaKnown RBP4.78□□□□□ -1.64
ASM4YDL088C RRP15Q06511 250 aaPredicted RBP4.78□□□□□ -1.64
ASM4YDL088C NOP8Q08287 484 aaPredicted RBP4.78□□□□□ -1.64
ASM4YDL088C SVS1Q12254 260 aa4.78□□□□□ -1.64
ASM4YDL088C CMP2P14747 604 aa4.78□□□□□ -1.64
ASM4YDL088C RER2P35196 286 aa4.78□□□□□ -1.64
ASM4YDL088C MEF2P39677 819 aa4.78□□□□□ -1.64
ASM4YDL088C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
ASM4YDL088C TMA46Q12000 345 aaKnown RBP4.78□□□□□ -1.64
ASM4YDL088C KIN2P13186 1147 aaKnown RBP4.77□□□□□ -1.65
ASM4YDL088C GCN5Q03330 439 aa4.77□□□□□ -1.65
ASM4YDL088C BAS1P22035 811 aa4.76□□□□□ -1.65
ASM4YDL088C APL1P27351 700 aa4.76□□□□□ -1.65
ASM4YDL088C ABZ1P37254 787 aaPredicted RBP4.76□□□□□ -1.65
ASM4YDL088C RMD1Q03441 430 aa4.76□□□□□ -1.65
ASM4YDL088C GAL10P04397 699 aa4.75□□□□□ -1.65
ASM4YDL088C PET112P33893 541 aa4.75□□□□□ -1.65
ASM4YDL088C MPH1P40562 993 aa4.75□□□□□ -1.65
ASM4YDL088C TIF35Q04067 274 aaKnown RBP4.75□□□□□ -1.65
ASM4YDL088C CLU1Q03690 1277 aaKnown RBP4.74□□□□□ -1.65
ASM4YDL088C YDR132CQ03900 495 aa4.74□□□□□ -1.65
ASM4YDL088C SPP382Q06411 708 aaPredicted RBP4.74□□□□□ -1.65
ASM4YDL088C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
ASM4YDL088C GNT1Q12096 491 aa4.74□□□□□ -1.65
ASM4YDL088C PRE10P21242 288 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
ASM4YDL088C UGA2P38067 497 aa4.74□□□□□ -1.65
ASM4YDL088C MXR1P40029 184 aa4.74□□□□□ -1.65
ASM4YDL088C PLB2Q03674 706 aa4.74□□□□□ -1.65
ASM4YDL088C MPT5P39016 859 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
ASM4YDL088C PBP1P53297 722 aaKnown RBP4.73□□□□□ -1.65
ASM4YDL088C RXT3Q07458 294 aa4.73□□□□□ -1.65
ASM4YDL088C RPL11AP0C0W9 174 aaKnown RBP4.72□□□□□ -1.65
ASM4YDL088C LYP1P32487 611 aa4.72□□□□□ -1.65
ASM4YDL088C SHM2P37291 469 aaKnown RBP4.72□□□□□ -1.65
ASM4YDL088C TAT2P38967 592 aa4.72□□□□□ -1.65
ASM4YDL088C GTF1P53260 183 aaPredicted RBP4.72□□□□□ -1.65
ASM4YDL088C ACM1Q08981 209 aa4.72□□□□□ -1.65
ASM4YDL088C RPL11BQ3E757 174 aaPredicted RBP4.72□□□□□ -1.65
ASM4YDL088C TRP2P00899 507 aaKnown RBP4.71□□□□□ -1.66
ASM4YDL088C MOT2P34909 587 aaKnown RBP4.71□□□□□ -1.66
ASM4YDL088C GEM1P39722 662 aa4.71□□□□□ -1.66
ASM4YDL088C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
ASM4YDL088C GPB1Q08886 897 aa4.71□□□□□ -1.66
ASM4YDL088C THS1P04801 734 aaKnown RBP4.7□□□□□ -1.66
ASM4YDL088C INO1P11986 533 aa4.7□□□□□ -1.66
ASM4YDL088C SRM1P21827 482 aa4.7□□□□□ -1.66
ASM4YDL088C CTS1P29029 562 aa4.7□□□□□ -1.66
ASM4YDL088C TYW3P53177 273 aa4.7□□□□□ -1.66
ASM4YDL088C ATG13Q06628 738 aa4.7□□□□□ -1.66
ASM4YDL088C CDC34P14682 295 aa4.7□□□□□ -1.66
ASM4YDL088C DUS4Q06063 367 aa4.7□□□□□ -1.66
ASM4YDL088C ACK1Q07622 623 aaPredicted RBP4.7□□□□□ -1.66
ASM4YDL088C RIB2Q12362 591 aaKnown RBP4.7□□□□□ -1.66
ASM4YDL088C BI4P03879 638 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms