RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W ECM2P38241 364 aaKnown RBP2.83□□□□□ -1.96
SNF5YBR289W DOS2P54858 310 aa2.83□□□□□ -1.96
SNF5YBR289W SBP1P10080 294 aaKnown RBP2.83□□□□□ -1.96
SNF5YBR289W YKL077WP36081 392 aa2.83□□□□□ -1.96
SNF5YBR289W IRR1P40541 1150 aa2.83□□□□□ -1.96
SNF5YBR289W YJL045WP47052 634 aa2.83□□□□□ -1.96
SNF5YBR289W ARI1P53111 347 aaKnown RBP2.83□□□□□ -1.96
SNF5YBR289W UTP8P53276 713 aaKnown RBP2.83□□□□□ -1.96
SNF5YBR289W RNH70P53331 553 aa2.83□□□□□ -1.96
SNF5YBR289W TDA5Q06417 326 aaKnown RBP2.83□□□□□ -1.96
SNF5YBR289W FAL1Q12099 399 aaKnown RBP2.83□□□□□ -1.96
SNF5YBR289W MAE1P36013 669 aaKnown RBP2.82□□□□□ -1.96
SNF5YBR289W PEX7P39108 375 aa2.82□□□□□ -1.96
SNF5YBR289W YAR028WP39548 234 aa2.82□□□□□ -1.96
SNF5YBR289W GPB2P39717 880 aa2.82□□□□□ -1.96
SNF5YBR289W BOI2P39969 1040 aa2.82□□□□□ -1.96
SNF5YBR289W OYE3P41816 400 aaPredicted RBP2.82□□□□□ -1.96
SNF5YBR289W YJL049WP47048 450 aa2.82□□□□□ -1.96
SNF5YBR289W YNR063WP53749 607 aa2.82□□□□□ -1.96
SNF5YBR289W DOT1Q04089 582 aaKnown RBP2.82□□□□□ -1.96
SNF5YBR289W YOR223WQ12015 292 aa2.82□□□□□ -1.96
SNF5YBR289W STI1P15705 589 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96 RIP-Chip
SNF5YBR289W SAC7P17121 654 aa2.82□□□□□ -1.96
SNF5YBR289W SRM1P21827 482 aa2.82□□□□□ -1.96
SNF5YBR289W CCT8P47079 568 aaKnown RBP2.82□□□□□ -1.96
SNF5YBR289W ALG12P53730 551 aa2.82□□□□□ -1.96
SNF5YBR289W HRQ1Q05549 1077 aa2.82□□□□□ -1.96
SNF5YBR289W YVC1Q12324 675 aa2.82□□□□□ -1.96
SNF5YBR289W SPO21Q12411 609 aa2.82□□□□□ -1.96
SNF5YBR289W HBN1Q96VH4 193 aa2.82□□□□□ -1.96
SNF5YBR289W SMY2P32909 740 aaKnown RBP2.81□□□□□ -1.96
SNF5YBR289W RGD1P38339 666 aa2.81□□□□□ -1.96
SNF5YBR289W YKE2P52553 114 aa2.81□□□□□ -1.96
SNF5YBR289W RKM4Q12504 494 aa2.81□□□□□ -1.96
SNF5YBR289W PTC5Q12511 572 aa2.81□□□□□ -1.96
SNF5YBR289W SIT1P39980 628 aa2.81□□□□□ -1.96
SNF5YBR289W GUS1P46655 708 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SNF5YBR289W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SNF5YBR289W UBX5Q06682 500 aa2.81□□□□□ -1.96
SNF5YBR289W WRS1Q12109 432 aaKnown RBP2.81□□□□□ -1.96
SNF5YBR289W SHU2P38957 223 aa2.8□□□□□ -1.96
SNF5YBR289W YLR257WQ06146 321 aaKnown RBP2.8□□□□□ -1.96
SNF5YBR289W XYL2Q07993 356 aa2.8□□□□□ -1.96
SNF5YBR289W GNT1Q12096 491 aa2.8□□□□□ -1.96
SNF5YBR289W YPR053CQ6Q5F3 151 aa2.8□□□□□ -1.96
SNF5YBR289W MEF1P25039 761 aa2.8□□□□□ -1.96
SNF5YBR289W YSC84P32793 468 aa2.8□□□□□ -1.96
SNF5YBR289W PUS7Q08647 676 aaKnown RBP2.8□□□□□ -1.96
SNF5YBR289W GCD1P09032 578 aaPredicted RBP2.79□□□□□ -1.96
SNF5YBR289W NAP1P25293 417 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W CDC12P32468 407 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W NUP82P40368 713 aa2.79□□□□□ -1.96
SNF5YBR289W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SNF5YBR289W CDC53Q12018 815 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W RPS4AP0CX35 261 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W RPS4BP0CX36 261 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W MTR4P47047 1073 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W CWC24P53769 259 aa2.79□□□□□ -1.96
SNF5YBR289W NAN1Q02931 896 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W FPR4Q06205 392 aaPredicted RBP2.79□□□□□ -1.96
SNF5YBR289W YLR122CQ12312 125 aa2.79□□□□□ -1.96
SNF5YBR289W LPX1Q12405 387 aaKnown RBP2.79□□□□□ -1.96
SNF5YBR289W BI4P03879 638 aa2.78□□□□□ -1.96
SNF5YBR289W MIH1P23748 554 aa2.78□□□□□ -1.96
SNF5YBR289W PBY1P38254 753 aa2.78□□□□□ -1.96
SNF5YBR289W TSL1P38427 1098 aaKnown RBP2.78□□□□□ -1.96
SNF5YBR289W CCC2P38995 1004 aa2.78□□□□□ -1.96
SNF5YBR289W RPN3P40016 523 aaKnown RBP2.78□□□□□ -1.96
SNF5YBR289W CTH1P47976 325 aa2.78□□□□□ -1.96
SNF5YBR289W FAR11P53917 953 aa2.78□□□□□ -1.96
SNF5YBR289W CIT1P00890 479 aa2.78□□□□□ -1.96
SNF5YBR289W TRP3P00937 484 aa2.78□□□□□ -1.96
SNF5YBR289W NFS1P25374 497 aa2.78□□□□□ -1.96
SNF5YBR289W SRP40P32583 406 aaPredicted RBP2.78□□□□□ -1.96
SNF5YBR289W YKL091CP33324 310 aaKnown RBP2.78□□□□□ -1.96
SNF5YBR289W YKL107WP34251 309 aa2.78□□□□□ -1.96
SNF5YBR289W NNK1P36003 928 aa2.78□□□□□ -1.96
SNF5YBR289W TIM54P47045 478 aa2.78□□□□□ -1.96
SNF5YBR289W HXT16P47185 567 aa2.78□□□□□ -1.96
SNF5YBR289W YMR187CQ03236 431 aa2.78□□□□□ -1.96
SNF5YBR289W YLR001CQ07895 862 aa2.78□□□□□ -1.96
SNF5YBR289W PIN4P34217 668 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SNF5YBR289W MRP8P35719 219 aa2.77□□□□□ -1.97
SNF5YBR289W GIC1P38785 314 aa2.77□□□□□ -1.97
SNF5YBR289W VPS53P47061 822 aa2.77□□□□□ -1.97
SNF5YBR289W YNR014WP53719 212 aa2.77□□□□□ -1.97
SNF5YBR289W YPL260WQ08977 551 aa2.77□□□□□ -1.97
SNF5YBR289W MSD1P15179 658 aaKnown RBP2.77□□□□□ -1.97
SNF5YBR289W ACE2P21192 770 aa2.77□□□□□ -1.97
SNF5YBR289W GYP8P43570 497 aa2.77□□□□□ -1.97
SNF5YBR289W YGR125WP53273 1036 aa2.77□□□□□ -1.97
SNF5YBR289W IOC4Q04213 475 aa2.77□□□□□ -1.97
SNF5YBR289W RRP14P36080 434 aaKnown RBP2.77□□□□□ -1.97
SNF5YBR289W SEC26P41810 973 aaKnown RBP2.77□□□□□ -1.97
SNF5YBR289W HNT2P49775 206 aa2.77□□□□□ -1.97
SNF5YBR289W EAF1Q06337 982 aa2.77□□□□□ -1.97
SNF5YBR289W ATG13Q06628 738 aa2.77□□□□□ -1.97
SNF5YBR289W GIC2Q06648 383 aa2.77□□□□□ -1.97
SNF5YBR289W MDM12Q92328 271 aa2.77□□□□□ -1.97
SNF5YBR289W WHI3P34761 661 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms