RNA–Protein interactions for RNA: ENST00000641970.1

LINC02228-203, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 1,355 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-203ENST00000641970 ITPK1Q13572 414 aa28.88■■■□□ 2.21
LINC02228-203ENST00000641970 LINC00116Q8NCU8 138 aa28.88■■■□□ 2.21
LINC02228-203ENST00000641970 RBM42Q9BTD8 480 aaKnown RBP28.88■■■□□ 2.21
LINC02228-203ENST00000641970 ITGB4P16144 1822 aa28.87■■■□□ 2.21
LINC02228-203ENST00000641970 GAS2L2Q8NHY3 880 aa28.87■■■□□ 2.21
LINC02228-203ENST00000641970 RNMTO43148 476 aaKnown RBP28.86■■■□□ 2.21
LINC02228-203ENST00000641970 SLC52A2Q9HAB3 445 aa28.86■■■□□ 2.21
LINC02228-203ENST00000641970 FHDC1Q9C0D6 1143 aaPredicted RBP28.85■■■□□ 2.21
LINC02228-203ENST00000641970 LGR6Q9HBX8 967 aa28.85■■■□□ 2.21
LINC02228-203ENST00000641970 C5P01031 1676 aa28.84■■■□□ 2.21
LINC02228-203ENST00000641970 SSFA2P28290 1259 aa28.84■■■□□ 2.21
LINC02228-203ENST00000641970 QSER1Q2KHR3 1735 aa28.83■■■□□ 2.21
LINC02228-203ENST00000641970 DCAF8L1A6NGE4 600 aa28.83■■■□□ 2.21
LINC02228-203ENST00000641970 U2AF1L5P0DN76 240 aaPredicted RBP28.83■■■□□ 2.21
LINC02228-203ENST00000641970 U2AF1Q01081 240 aaKnown RBP eCLIP28.83■■■□□ 2.21
LINC02228-203ENST00000641970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.82■■■□□ 2.2
LINC02228-203ENST00000641970 PRKAR2BP31323 418 aa28.82■■■□□ 2.2
LINC02228-203ENST00000641970 SLC4A9Q96Q91 983 aa28.82■■■□□ 2.2
LINC02228-203ENST00000641970 RSPH6AQ9H0K4 717 aa28.82■■■□□ 2.2
LINC02228-203ENST00000641970 C4BP0C0L5 1744 aa28.81■■■□□ 2.2
LINC02228-203ENST00000641970 GNPATO15228 680 aa28.81■■■□□ 2.2
LINC02228-203ENST00000641970 PTCD1O75127 700 aaKnown RBP28.81■■■□□ 2.2
LINC02228-203ENST00000641970 PHF14O94880 888 aa28.81■■■□□ 2.2
LINC02228-203ENST00000641970 ZEB1P37275 1124 aaPredicted RBP28.81■■■□□ 2.2
LINC02228-203ENST00000641970 SYT17Q9BSW7 474 aa28.81■■■□□ 2.2
LINC02228-203ENST00000641970 MAP3K5Q99683 1374 aa28.8■■■□□ 2.2
LINC02228-203ENST00000641970 GNAT3A8MTJ3 354 aa28.79■■■□□ 2.2
LINC02228-203ENST00000641970 FCHSD2O94868 740 aa28.79■■■□□ 2.2
LINC02228-203ENST00000641970 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
LINC02228-203ENST00000641970 RC3H1Q5TC82 1133 aaKnown RBP28.78■■■□□ 2.2
LINC02228-203ENST00000641970 AMIGO3Q86WK7 504 aa28.78■■■□□ 2.2
LINC02228-203ENST00000641970 MRC1P22897 1456 aa28.78■■■□□ 2.2
LINC02228-203ENST00000641970 RALBP1Q15311 655 aa28.77■■■□□ 2.2
LINC02228-203ENST00000641970 CNTNAP4Q9C0A0 1308 aa28.77■■■□□ 2.2
LINC02228-203ENST00000641970 MSL1Q68DK7 614 aa28.76■■■□□ 2.2
LINC02228-203ENST00000641970 PHACTR3Q96KR7 559 aa28.76■■■□□ 2.2
LINC02228-203ENST00000641970 RTCBQ9Y3I0 505 aaKnown RBP28.76■■■□□ 2.2
LINC02228-203ENST00000641970 SMIM5Q71RC9 77 aa28.74■■■□□ 2.19
LINC02228-203ENST00000641970 ADRA2BP18089 450 aa28.73■■■□□ 2.19
LINC02228-203ENST00000641970 TEFQ10587 303 aa28.73■■■□□ 2.19
LINC02228-203ENST00000641970 TUBGCP6Q96RT7 1819 aa28.72■■■□□ 2.19
LINC02228-203ENST00000641970 TRAPPC3LQ5T215 181 aa28.72■■■□□ 2.19
LINC02228-203ENST00000641970 KLHL34Q8N239 644 aa28.72■■■□□ 2.19
LINC02228-203ENST00000641970 IL17REQ8NFR9 667 aa28.72■■■□□ 2.19
LINC02228-203ENST00000641970 TAF1LQ8IZX4 1826 aa28.71■■■□□ 2.19
LINC02228-203ENST00000641970 RPS6KA4O75676 772 aa28.71■■■□□ 2.19
LINC02228-203ENST00000641970 SLC39A6Q13433 755 aa28.71■■■□□ 2.19
LINC02228-203ENST00000641970 ZNF831Q5JPB2 1677 aa28.71■■■□□ 2.19
LINC02228-203ENST00000641970 NEFMP07197 916 aa28.69■■■□□ 2.18
LINC02228-203ENST00000641970 CRKLP46109 303 aaKnown RBP28.69■■■□□ 2.18
LINC02228-203ENST00000641970 TTC5Q8N0Z6 440 aa28.68■■■□□ 2.18
LINC02228-203ENST00000641970 ADAMTS7Q9UKP4 1686 aa28.68■■■□□ 2.18
LINC02228-203ENST00000641970 SCN11AQ9UI33 1791 aa28.67■■■□□ 2.18
LINC02228-203ENST00000641970 VSIG10Q8N0Z9 540 aa28.67■■■□□ 2.18
LINC02228-203ENST00000641970 RTF1Q92541 710 aaKnown RBP28.67■■■□□ 2.18
LINC02228-203ENST00000641970 CEMIPQ8WUJ3 1361 aa28.67■■■□□ 2.18
LINC02228-203ENST00000641970 DNAJC10Q8IXB1 793 aa28.65■■■□□ 2.18
LINC02228-203ENST00000641970 ARHGEF1Q92888 912 aaKnown RBP28.65■■■□□ 2.18
LINC02228-203ENST00000641970 COL24A1Q17RW2 1714 aa28.65■■■□□ 2.18
LINC02228-203ENST00000641970 RFC4P35249 363 aa28.64■■■□□ 2.18
LINC02228-203ENST00000641970 PNNQ9H307 717 aaKnown RBP28.64■■■□□ 2.18
LINC02228-203ENST00000641970 HTATSF1O43719 755 aaKnown RBP28.63■■■□□ 2.17
LINC02228-203ENST00000641970 ZNF790Q6PG37 636 aa28.62■■■□□ 2.17
LINC02228-203ENST00000641970 NLGN1Q8N2Q7 840 aa28.62■■■□□ 2.17
LINC02228-203ENST00000641970 CCDC87Q9NVE4 849 aa28.62■■■□□ 2.17
LINC02228-203ENST00000641970 CD2APQ9Y5K6 639 aa28.62■■■□□ 2.17
LINC02228-203ENST00000641970 MYBBP1AQ9BQG0 1328 aaKnown RBP28.62■■■□□ 2.17
LINC02228-203ENST00000641970 INTS5Q6P9B9 1019 aaKnown RBP28.62■■■□□ 2.17
LINC02228-203ENST00000641970 UBR3Q6ZT12 1888 aa28.61■■■□□ 2.17
LINC02228-203ENST00000641970 KCPQ6ZWJ8 1503 aa28.61■■■□□ 2.17
LINC02228-203ENST00000641970 CYP19A1P11511 503 aaPredicted RBP28.61■■■□□ 2.17
LINC02228-203ENST00000641970 BTBD11A6QL63 1104 aa28.59■■■□□ 2.17
LINC02228-203ENST00000641970 NLGN2Q8NFZ4 835 aa28.59■■■□□ 2.17
LINC02228-203ENST00000641970 CICQ96RK0 1608 aaPredicted RBP28.59■■■□□ 2.17
LINC02228-203ENST00000641970 STARD3NLO95772 234 aa28.58■■■□□ 2.17
LINC02228-203ENST00000641970 MCM10Q7L590 875 aa28.58■■■□□ 2.17
LINC02228-203ENST00000641970 ZNF496Q96IT1 587 aaPredicted RBP28.58■■■□□ 2.17
LINC02228-203ENST00000641970 PLEKHF1Q96S99 279 aa28.58■■■□□ 2.17
LINC02228-203ENST00000641970 MMP10P09238 476 aa28.57■■■□□ 2.16
LINC02228-203ENST00000641970 FMNL2Q96PY5 1086 aa28.57■■■□□ 2.16
LINC02228-203ENST00000641970 TEX13AQ9BXU3 409 aaPredicted RBP28.57■■■□□ 2.16
LINC02228-203ENST00000641970 MAPK8IP3Q9UPT6 1336 aa28.56■■■□□ 2.16
LINC02228-203ENST00000641970 GYS1P13807 737 aa28.56■■■□□ 2.16
LINC02228-203ENST00000641970 GPR162Q16538 588 aa28.56■■■□□ 2.16
LINC02228-203ENST00000641970 COL5A3P25940 1745 aaPredicted RBP28.56■■■□□ 2.16
LINC02228-203ENST00000641970 HEG1Q9ULI3 1381 aa28.56■■■□□ 2.16
LINC02228-203ENST00000641970 SOS1Q07889 1333 aaPredicted RBP28.54■■■□□ 2.16
LINC02228-203ENST00000641970 USP42Q9H9J4 1324 aaKnown RBP28.54■■■□□ 2.16
LINC02228-203ENST00000641970 TJP1Q07157 1748 aa28.53■■■□□ 2.16
LINC02228-203ENST00000641970 YY1P25490 414 aa28.52■■■□□ 2.16
LINC02228-203ENST00000641970 DCTN1Q14203 1278 aa28.52■■■□□ 2.16
LINC02228-203ENST00000641970 NFE2L2Q16236 605 aa28.52■■■□□ 2.16
LINC02228-203ENST00000641970 ZBTB1Q9Y2K1 713 aa28.52■■■□□ 2.16
LINC02228-203ENST00000641970 ZPR1O75312 459 aa28.5■■■□□ 2.15
LINC02228-203ENST00000641970 PELP1Q8IZL8 1130 aaKnown RBP28.5■■■□□ 2.15
LINC02228-203ENST00000641970 PRKRIP1Q9H875 184 aaPredicted RBP28.5■■■□□ 2.15
LINC02228-203ENST00000641970 SRP68Q9UHB9 627 aaKnown RBP28.5■■■□□ 2.15
LINC02228-203ENST00000641970 KCNQ3O43525 872 aa28.49■■■□□ 2.15
LINC02228-203ENST00000641970 TAF7Q15545 349 aaPredicted RBP28.49■■■□□ 2.15
LINC02228-203ENST00000641970 PARP3Q9Y6F1 533 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms