RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 C10orf71Q711Q0 1435 aa11.11□□□□□ -0.63
PHGDH-217ENST00000641455 PIGBQ92521 554 aa11.11□□□□□ -0.63
PHGDH-217ENST00000641455 TNRC6CQ9HCJ0 1690 aaKnown RBP11.11□□□□□ -0.63
PHGDH-217ENST00000641455 CYP27B1O15528 508 aa11.1□□□□□ -0.63
PHGDH-217ENST00000641455 ATP6V1AP38606 617 aa11.1□□□□□ -0.63
PHGDH-217ENST00000641455 TMF1P82094 1093 aa11.1□□□□□ -0.63
PHGDH-217ENST00000641455 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
PHGDH-217ENST00000641455 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
PHGDH-217ENST00000641455 SLC34A2O95436 690 aa11.09□□□□□ -0.63
PHGDH-217ENST00000641455 ITPK1Q13572 414 aa11.09□□□□□ -0.63
PHGDH-217ENST00000641455 TMOD3Q9NYL9 352 aa11.09□□□□□ -0.63
PHGDH-217ENST00000641455 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
PHGDH-217ENST00000641455 MAP2P11137 1827 aaKnown RBP11.09□□□□□ -0.63
PHGDH-217ENST00000641455 ARFGEF1Q9Y6D6 1849 aa11.09□□□□□ -0.63
PHGDH-217ENST00000641455 BRCA1P38398 1863 aaKnown RBP11.08□□□□□ -0.64
PHGDH-217ENST00000641455 DALRD3Q5D0E6 543 aaKnown RBP11.08□□□□□ -0.64
PHGDH-217ENST00000641455 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
PHGDH-217ENST00000641455 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
PHGDH-217ENST00000641455 PIM2Q9P1W9 311 aa11.08□□□□□ -0.64
PHGDH-217ENST00000641455 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
PHGDH-217ENST00000641455 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
PHGDH-217ENST00000641455 ASAP1Q9ULH1 1129 aa11.07□□□□□ -0.64
PHGDH-217ENST00000641455 RFC4P35249 363 aa11.06□□□□□ -0.64
PHGDH-217ENST00000641455 HSP90AB2PQ58FF8 381 aa11.06□□□□□ -0.64
PHGDH-217ENST00000641455 DCAF5Q96JK2 942 aa11.06□□□□□ -0.64
PHGDH-217ENST00000641455 SPG7Q9UQ90 795 aa11.06□□□□□ -0.64
PHGDH-217ENST00000641455 SIN3AQ96ST3 1273 aa11.05□□□□□ -0.64
PHGDH-217ENST00000641455 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
PHGDH-217ENST00000641455 GGNBP2Q9H3C7 697 aa11.05□□□□□ -0.64
PHGDH-217ENST00000641455 INSRP06213 1382 aa11.04□□□□□ -0.64
PHGDH-217ENST00000641455 GYS1P13807 737 aa11.04□□□□□ -0.64
PHGDH-217ENST00000641455 VEGFAP15692 232 aaPredicted RBP11.04□□□□□ -0.64
PHGDH-217ENST00000641455 KCNA3P22001 575 aa11.04□□□□□ -0.64
PHGDH-217ENST00000641455 RASSF7Q02833 373 aa11.04□□□□□ -0.64
PHGDH-217ENST00000641455 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
PHGDH-217ENST00000641455 SBF1O95248 1867 aa11.04□□□□□ -0.64
PHGDH-217ENST00000641455 FLT4P35916 1363 aa11.03□□□□□ -0.64
PHGDH-217ENST00000641455 ADRA2BP18089 450 aa11.03□□□□□ -0.64
PHGDH-217ENST00000641455 CHRNA5P30532 468 aa11.03□□□□□ -0.64
PHGDH-217ENST00000641455 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
PHGDH-217ENST00000641455 ATG3Q9NT62 314 aa11.03□□□□□ -0.64
PHGDH-217ENST00000641455 MKRN1Q9UHC7 482 aaKnown RBP11.03□□□□□ -0.64
PHGDH-217ENST00000641455 PCNTO95613 3336 aa11.01□□□□□ -0.65
PHGDH-217ENST00000641455 GLTPD2A6NH11 291 aa11.01□□□□□ -0.65
PHGDH-217ENST00000641455 PPM1GO15355 546 aaPredicted RBP11.01□□□□□ -0.65
PHGDH-217ENST00000641455 PUS7Q96PZ0 661 aaKnown RBP11.01□□□□□ -0.65
PHGDH-217ENST00000641455 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
PHGDH-217ENST00000641455 FYB1O15117 783 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 FOXN1O15353 648 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 RPS6KA4O75676 772 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 LMNB1P20700 586 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 AIDAQ96BJ3 306 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 SRP68Q9UHB9 627 aaKnown RBP11□□□□□ -0.65
PHGDH-217ENST00000641455 CNTNAP4Q9C0A0 1308 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 KDRP35968 1356 aa11□□□□□ -0.65
PHGDH-217ENST00000641455 TIAM2Q8IVF5 1701 aa10.99□□□□□ -0.65
PHGDH-217ENST00000641455 PHKG2P15735 406 aa10.99□□□□□ -0.65
PHGDH-217ENST00000641455 DDR1Q08345 913 aa10.99□□□□□ -0.65
PHGDH-217ENST00000641455 FAM161AQ3B820 660 aa10.99□□□□□ -0.65
PHGDH-217ENST00000641455 RC3H1Q5TC82 1133 aaKnown RBP10.99□□□□□ -0.65
PHGDH-217ENST00000641455 COL5A3P25940 1745 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-217ENST00000641455 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
PHGDH-217ENST00000641455 FKBP8Q14318 412 aa10.98□□□□□ -0.65
PHGDH-217ENST00000641455 SLC4A9Q96Q91 983 aa10.98□□□□□ -0.65
PHGDH-217ENST00000641455 PRDM10Q9NQV6 1147 aa10.98□□□□□ -0.65
PHGDH-217ENST00000641455 CREBZFQ9NS37 354 aa10.98□□□□□ -0.65
PHGDH-217ENST00000641455 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
PHGDH-217ENST00000641455 KIF24Q5T7B8 1368 aa10.98□□□□□ -0.65
PHGDH-217ENST00000641455 CTCFP49711 727 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-217ENST00000641455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.65
PHGDH-217ENST00000641455 USP42Q9H9J4 1324 aaKnown RBP10.97□□□□□ -0.65
PHGDH-217ENST00000641455 CCDC88AQ3V6T2 1871 aa10.97□□□□□ -0.65
PHGDH-217ENST00000641455 MYH14Q7Z406 1995 aaKnown RBP10.96□□□□□ -0.65
PHGDH-217ENST00000641455 KDM6AO15550 1401 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-217ENST00000641455 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
PHGDH-217ENST00000641455 ZNF831Q5JPB2 1677 aa10.95□□□□□ -0.66
PHGDH-217ENST00000641455 NCAPD2Q15021 1401 aa10.95□□□□□ -0.66
PHGDH-217ENST00000641455 PTCD1O75127 700 aaKnown RBP10.95□□□□□ -0.66
PHGDH-217ENST00000641455 CRKLP46109 303 aaKnown RBP10.95□□□□□ -0.66
PHGDH-217ENST00000641455 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
PHGDH-217ENST00000641455 EYA1Q99502 592 aa10.95□□□□□ -0.66
PHGDH-217ENST00000641455 PCDH10Q9P2E7 1040 aa10.95□□□□□ -0.66
PHGDH-217ENST00000641455 CNTNAP1P78357 1384 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 ST20-MTHFSA0A0A6YYL1 179 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 ERVV-2B6SEH9 535 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 POLRMTO00411 1230 aaKnown RBP10.94□□□□□ -0.66
PHGDH-217ENST00000641455 ZPR1O75312 459 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 LBX1P52954 281 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 CABP4P57796 275 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 TTLL6Q8N841 843 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 ABHD8Q96I13 439 aa10.94□□□□□ -0.66
PHGDH-217ENST00000641455 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
PHGDH-217ENST00000641455 POTECB2RU33 542 aa10.93□□□□□ -0.66
PHGDH-217ENST00000641455 HSP90AB1P08238 724 aaKnown RBP10.93□□□□□ -0.66
PHGDH-217ENST00000641455 TESK2Q96S53 571 aa10.93□□□□□ -0.66
PHGDH-217ENST00000641455 NFKBIEO00221 500 aa10.92□□□□□ -0.66
PHGDH-217ENST00000641455 SLC24A1O60721 1099 aa10.92□□□□□ -0.66
PHGDH-217ENST00000641455 ERFEQ4G0M1 354 aa10.92□□□□□ -0.66
PHGDH-217ENST00000641455 USPL1Q5W0Q7 1092 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms