RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CDK11BP21127 795 aaKnown RBP16.54■□□□□ 0.24
SCARB2-227ENST00000640957 PDE1AP54750 535 aa16.54■□□□□ 0.24
SCARB2-227ENST00000640957 CCDC186Q7Z3E2 898 aa16.54■□□□□ 0.24
SCARB2-227ENST00000640957 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
SCARB2-227ENST00000640957 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
SCARB2-227ENST00000640957 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
SCARB2-227ENST00000640957 COG3Q96JB2 828 aa16.54■□□□□ 0.24
SCARB2-227ENST00000640957 A0A087WWV3 80 aa16.53■□□□□ 0.24
SCARB2-227ENST00000640957 KIAA1524Q8TCG1 905 aa16.53■□□□□ 0.24
SCARB2-227ENST00000640957 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
SCARB2-227ENST00000640957 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
SCARB2-227ENST00000640957 LETM1O95202 739 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-227ENST00000640957 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
SCARB2-227ENST00000640957 PHF14O94880 888 aa16.52■□□□□ 0.24
SCARB2-227ENST00000640957 NCBP1Q09161 790 aaKnown RBP16.52■□□□□ 0.24
SCARB2-227ENST00000640957 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
SCARB2-227ENST00000640957 CCDC183Q5T5S1 534 aa16.52■□□□□ 0.24
SCARB2-227ENST00000640957 G2E3Q7L622 706 aa16.52■□□□□ 0.24
SCARB2-227ENST00000640957 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.24
SCARB2-227ENST00000640957 ABCC4O15439 1325 aa16.52■□□□□ 0.24
SCARB2-227ENST00000640957 ABCA6Q8N139 1617 aa16.52■□□□□ 0.24
SCARB2-227ENST00000640957 SLC4A2P04920 1241 aa16.52■□□□□ 0.23
SCARB2-227ENST00000640957 GNAI1P63096 354 aa16.52■□□□□ 0.23
SCARB2-227ENST00000640957 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 KIF20AO95235 890 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 MX1P20591 662 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 ARID5BQ14865 1188 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 TRMT1Q9NXH9 659 aaKnown RBP16.51■□□□□ 0.23
SCARB2-227ENST00000640957 TCHHQ07283 1943 aa16.51■□□□□ 0.23
SCARB2-227ENST00000640957 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 CCDC83Q8IWF9 413 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 SPG7Q9UQ90 795 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 MSH6P52701 1360 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 MAP3K4Q9Y6R4 1608 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 FCHSD2O94868 740 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 NECAB1Q8N987 351 aa16.5■□□□□ 0.23
SCARB2-227ENST00000640957 TFIP11Q9UBB9 837 aaKnown RBP16.5■□□□□ 0.23
SCARB2-227ENST00000640957 IL16Q14005 1332 aa16.49■□□□□ 0.23
SCARB2-227ENST00000640957 POGZQ7Z3K3 1410 aa16.49■□□□□ 0.23
SCARB2-227ENST00000640957 LARGE1O95461 756 aa16.49■□□□□ 0.23
SCARB2-227ENST00000640957 TNNT1P13805 278 aa16.49■□□□□ 0.23
SCARB2-227ENST00000640957 SYT1P21579 422 aa16.49■□□□□ 0.23
SCARB2-227ENST00000640957 TET3O43151 1660 aa16.49■□□□□ 0.23
SCARB2-227ENST00000640957 LMOD2Q6P5Q4 547 aa16.49■□□□□ 0.23
SCARB2-227ENST00000640957 PPFIA3O75145 1194 aa16.48■□□□□ 0.23
SCARB2-227ENST00000640957 MCCP23508 829 aa16.48■□□□□ 0.23
SCARB2-227ENST00000640957 TRIM5Q9C035 493 aa16.48■□□□□ 0.23
SCARB2-227ENST00000640957 TPD52L1Q16890 204 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-227ENST00000640957 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
SCARB2-227ENST00000640957 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCARB2-227ENST00000640957 FOSBP53539 338 aa16.48■□□□□ 0.23
SCARB2-227ENST00000640957 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-227ENST00000640957 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
SCARB2-227ENST00000640957 SPTLC3Q9NUV7 552 aa16.46■□□□□ 0.23
SCARB2-227ENST00000640957 KIF1BO60333 1816 aa16.46■□□□□ 0.23
SCARB2-227ENST00000640957 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
SCARB2-227ENST00000640957 ARHGAP45Q92619 1136 aa16.46■□□□□ 0.23
SCARB2-227ENST00000640957 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.23
SCARB2-227ENST00000640957 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
SCARB2-227ENST00000640957 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
SCARB2-227ENST00000640957 STX6O43752 255 aa16.46■□□□□ 0.22
SCARB2-227ENST00000640957 CHMLP26374 656 aa16.46■□□□□ 0.22
SCARB2-227ENST00000640957 CEBPZQ03701 1054 aaKnown RBP16.46■□□□□ 0.22
SCARB2-227ENST00000640957 AK2P54819 239 aa16.45■□□□□ 0.22
SCARB2-227ENST00000640957 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
SCARB2-227ENST00000640957 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-227ENST00000640957 MYOM2P54296 1465 aa16.45■□□□□ 0.22
SCARB2-227ENST00000640957 USP27XA6NNY8 438 aa16.45■□□□□ 0.22
SCARB2-227ENST00000640957 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
SCARB2-227ENST00000640957 FAM184AQ8NB25 1140 aa16.45■□□□□ 0.22
SCARB2-227ENST00000640957 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
SCARB2-227ENST00000640957 PPRC1Q5VV67 1664 aaKnown RBP16.45■□□□□ 0.22
SCARB2-227ENST00000640957 ZSCAN22P10073 491 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-227ENST00000640957 LIG1P18858 919 aa16.44■□□□□ 0.22
SCARB2-227ENST00000640957 CUL4AQ13619 759 aa16.44■□□□□ 0.22
SCARB2-227ENST00000640957 ANKRD7Q92527 254 aa16.44■□□□□ 0.22
SCARB2-227ENST00000640957 ERCC4Q92889 916 aaPredicted RBP16.44■□□□□ 0.22
SCARB2-227ENST00000640957 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
SCARB2-227ENST00000640957 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
SCARB2-227ENST00000640957 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-227ENST00000640957 CCDC112Q8NEF3 446 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 NGDNQ8NEJ9 315 aaKnown RBP16.43■□□□□ 0.22
SCARB2-227ENST00000640957 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 IRX5P78411 483 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-227ENST00000640957 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 GJB2P29033 226 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 UBE2HP62256 183 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 ANO6Q4KMQ2 910 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
SCARB2-227ENST00000640957 FOXO3O43524 673 aa16.42■□□□□ 0.22
SCARB2-227ENST00000640957 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-227ENST00000640957 CASTP20810 708 aaKnown RBP16.42■□□□□ 0.22
SCARB2-227ENST00000640957 STK3Q13188 491 aa16.42■□□□□ 0.22
SCARB2-227ENST00000640957 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms