RNA–Protein interactions for RNA: ENST00000640824.1

KCNMA1-290, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 4

Gene KCNMA1, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-290ENST00000640824 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
KCNMA1-290ENST00000640824 COL3A1P02461 1466 aaPredicted RBP11.72□□□□□ -0.53
KCNMA1-290ENST00000640824 RNMTO43148 476 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-290ENST00000640824 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
KCNMA1-290ENST00000640824 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
KCNMA1-290ENST00000640824 PPP1R1BQ9UD71 204 aaPredicted RBP11.72□□□□□ -0.53
KCNMA1-290ENST00000640824 RALBP1Q15311 655 aa11.71□□□□□ -0.53
KCNMA1-290ENST00000640824 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
KCNMA1-290ENST00000640824 MTFR1LQ9H019 292 aa11.71□□□□□ -0.53
KCNMA1-290ENST00000640824 LRP5O75197 1615 aa11.71□□□□□ -0.54
KCNMA1-290ENST00000640824 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 PNPLA7Q6ZV29 1317 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 FCHSD2O94868 740 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 PTGER2P43116 358 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 ITPK1Q13572 414 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 COL23A1Q86Y22 540 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 SLC16A10Q8TF71 515 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
KCNMA1-290ENST00000640824 CASZ1Q86V15 1759 aa11.69□□□□□ -0.54
KCNMA1-290ENST00000640824 PTCD1O75127 700 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-290ENST00000640824 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
KCNMA1-290ENST00000640824 LINC00116Q8NCU8 138 aa11.69□□□□□ -0.54
KCNMA1-290ENST00000640824 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
KCNMA1-290ENST00000640824 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
KCNMA1-290ENST00000640824 SLC52A2Q9HAB3 445 aa11.69□□□□□ -0.54
KCNMA1-290ENST00000640824 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
KCNMA1-290ENST00000640824 FLAD1Q8NFF5 587 aa11.68□□□□□ -0.54
KCNMA1-290ENST00000640824 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
KCNMA1-290ENST00000640824 AK7Q96M32 723 aa11.68□□□□□ -0.54
KCNMA1-290ENST00000640824 TAF1LQ8IZX4 1826 aa11.67□□□□□ -0.54
KCNMA1-290ENST00000640824 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
KCNMA1-290ENST00000640824 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
KCNMA1-290ENST00000640824 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
KCNMA1-290ENST00000640824 PHF14O94880 888 aa11.66□□□□□ -0.54
KCNMA1-290ENST00000640824 AMIGO3Q86WK7 504 aa11.66□□□□□ -0.54
KCNMA1-290ENST00000640824 ARXQ96QS3 562 aa11.66□□□□□ -0.54
KCNMA1-290ENST00000640824 C5P01031 1676 aa11.65□□□□□ -0.54
KCNMA1-290ENST00000640824 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.54
KCNMA1-290ENST00000640824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.65□□□□□ -0.54
KCNMA1-290ENST00000640824 GNPATO15228 680 aa11.65□□□□□ -0.54
KCNMA1-290ENST00000640824 POLD1P28340 1107 aa11.65□□□□□ -0.54
KCNMA1-290ENST00000640824 TEFQ10587 303 aa11.65□□□□□ -0.54
KCNMA1-290ENST00000640824 RC3H1Q5TC82 1133 aaKnown RBP11.65□□□□□ -0.54
KCNMA1-290ENST00000640824 MAP3K5Q99683 1374 aa11.65□□□□□ -0.55
KCNMA1-290ENST00000640824 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.55
KCNMA1-290ENST00000640824 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
KCNMA1-290ENST00000640824 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-290ENST00000640824 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
KCNMA1-290ENST00000640824 MSL1Q68DK7 614 aa11.64□□□□□ -0.55
KCNMA1-290ENST00000640824 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 MYBBP1AQ9BQG0 1328 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 NEFMP07197 916 aa11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 SSFA2P28290 1259 aa11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 RTF1Q92541 710 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 PLEKHF1Q96S99 279 aa11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 SYT17Q9BSW7 474 aa11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 FHDC1Q9C0D6 1143 aaPredicted RBP11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
KCNMA1-290ENST00000640824 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
KCNMA1-290ENST00000640824 DCTN1Q14203 1278 aa11.62□□□□□ -0.55
KCNMA1-290ENST00000640824 MCM10Q7L590 875 aa11.62□□□□□ -0.55
KCNMA1-290ENST00000640824 DNAJC10Q8IXB1 793 aa11.62□□□□□ -0.55
KCNMA1-290ENST00000640824 ARHGEF1Q92888 912 aaKnown RBP11.62□□□□□ -0.55
KCNMA1-290ENST00000640824 PRKRIP1Q9H875 184 aaPredicted RBP11.62□□□□□ -0.55
KCNMA1-290ENST00000640824 HTATSF1O43719 755 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-290ENST00000640824 CRKLP46109 303 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-290ENST00000640824 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
KCNMA1-290ENST00000640824 TTC5Q8N0Z6 440 aa11.61□□□□□ -0.55
KCNMA1-290ENST00000640824 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
KCNMA1-290ENST00000640824 UBR3Q6ZT12 1888 aa11.61□□□□□ -0.55
KCNMA1-290ENST00000640824 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-290ENST00000640824 CNTNAP4Q9C0A0 1308 aa11.6□□□□□ -0.55
KCNMA1-290ENST00000640824 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
KCNMA1-290ENST00000640824 KCNQ3O43525 872 aa11.6□□□□□ -0.55
KCNMA1-290ENST00000640824 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-290ENST00000640824 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 CYP19A1P11511 503 aaPredicted RBP11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 RFC4P35249 363 aa11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 ZNF831Q5JPB2 1677 aa11.59□□□□□ -0.55
KCNMA1-290ENST00000640824 MRC1P22897 1456 aa11.58□□□□□ -0.56
KCNMA1-290ENST00000640824 STARD3NLO95772 234 aa11.58□□□□□ -0.56
KCNMA1-290ENST00000640824 TAF7Q15545 349 aaPredicted RBP11.58□□□□□ -0.56
KCNMA1-290ENST00000640824 CCDC87Q9NVE4 849 aa11.58□□□□□ -0.56
KCNMA1-290ENST00000640824 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
KCNMA1-290ENST00000640824 MAPK8IP3Q9UPT6 1336 aa11.58□□□□□ -0.56
KCNMA1-290ENST00000640824 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
KCNMA1-290ENST00000640824 NLGN1Q8N2Q7 840 aa11.57□□□□□ -0.56
KCNMA1-290ENST00000640824 FMNL2Q96PY5 1086 aa11.57□□□□□ -0.56
KCNMA1-290ENST00000640824 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
KCNMA1-290ENST00000640824 ADAMTS8Q9UP79 889 aa11.57□□□□□ -0.56
KCNMA1-290ENST00000640824 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
KCNMA1-290ENST00000640824 COL5A3P25940 1745 aaPredicted RBP11.56□□□□□ -0.56
KCNMA1-290ENST00000640824 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms