RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	MAP3K5	Q99683	1374 aa		18.95	■□□□□ 0.62
SDHD-209	ENST00000640554	LY75	O60449	1722 aa		18.95	■□□□□ 0.62
SDHD-209	ENST00000640554	TOGARAM1	Q9Y4F4	1720 aa		18.95	■□□□□ 0.62
SDHD-209	ENST00000640554	ATP6V1A	P38606	617 aa		18.95	■□□□□ 0.62
SDHD-209	ENST00000640554	MTFR1L	Q9H019	292 aa		18.95	■□□□□ 0.62
SDHD-209	ENST00000640554	PAPPA	Q13219	1627 aa		18.93	■□□□□ 0.62
SDHD-209	ENST00000640554	TEF	Q10587	303 aa		18.93	■□□□□ 0.62
SDHD-209	ENST00000640554	RTF1	Q92541	710 aa	Known RBP	18.93	■□□□□ 0.62
SDHD-209	ENST00000640554	RBM42	Q9BTD8	480 aa	Known RBP	18.93	■□□□□ 0.62
SDHD-209	ENST00000640554	ITGB4	P16144	1822 aa		18.93	■□□□□ 0.62
SDHD-209	ENST00000640554	RC3H1	Q5TC82	1133 aa	Known RBP	18.92	■□□□□ 0.62
SDHD-209	ENST00000640554	IL17RE	Q8NFR9	667 aa		18.92	■□□□□ 0.62
SDHD-209	ENST00000640554	AK7	Q96M32	723 aa		18.92	■□□□□ 0.62
SDHD-209	ENST00000640554	LRP5	O75197	1615 aa		18.92	■□□□□ 0.62
SDHD-209	ENST00000640554	PNPLA7	Q6ZV29	1317 aa		18.91	■□□□□ 0.62
SDHD-209	ENST00000640554	ZBTB7A	O95365	584 aa		18.9	■□□□□ 0.62
SDHD-209	ENST00000640554	PLEKHF1	Q96S99	279 aa		18.9	■□□□□ 0.62
SDHD-209	ENST00000640554	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.9	■□□□□ 0.62
SDHD-209	ENST00000640554	PTCD1	O75127	700 aa	Known RBP	18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	SSFA2	P28290	1259 aa		18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	ITPK1	Q13572	414 aa		18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	VSIG10	Q8N0Z9	540 aa		18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	MAPK8IP3	Q9UPT6	1336 aa		18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	CEMIP	Q8WUJ3	1361 aa		18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	MRC1	P22897	1456 aa		18.89	■□□□□ 0.61
SDHD-209	ENST00000640554	WDR43	Q15061	677 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
SDHD-209	ENST00000640554	TTC5	Q8N0Z6	440 aa		18.88	■□□□□ 0.61
SDHD-209	ENST00000640554	LINC00116	Q8NCU8	138 aa		18.88	■□□□□ 0.61
SDHD-209	ENST00000640554	SLC4A9	Q96Q91	983 aa		18.87	■□□□□ 0.61
SDHD-209	ENST00000640554	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.87	■□□□□ 0.61
SDHD-209	ENST00000640554	SRCAP	Q6ZRS2	3230 aa		18.87	■□□□□ 0.61
SDHD-209	ENST00000640554	CNTNAP4	Q9C0A0	1308 aa		18.86	■□□□□ 0.61
SDHD-209	ENST00000640554	NFE2L2	Q16236	605 aa		18.86	■□□□□ 0.61
SDHD-209	ENST00000640554	COL23A1	Q86Y22	540 aa	Predicted RBP	18.86	■□□□□ 0.61
SDHD-209	ENST00000640554	SCN11A	Q9UI33	1791 aa		18.86	■□□□□ 0.61
SDHD-209	ENST00000640554	ADAMTS7	Q9UKP4	1686 aa		18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	MSH5	O43196	834 aa		18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	ADRA2B	P18089	450 aa		18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	POLD1	P28340	1107 aa		18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	PTGER2	P43116	358 aa		18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	RTCB	Q9Y3I0	505 aa	Known RBP	18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	CASZ1	Q86V15	1759 aa		18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	ZNF831	Q5JPB2	1677 aa		18.85	■□□□□ 0.61
SDHD-209	ENST00000640554	GNPAT	O15228	680 aa		18.84	■□□□□ 0.61
SDHD-209	ENST00000640554	ANP32C	O43423	234 aa		18.84	■□□□□ 0.61
SDHD-209	ENST00000640554	ZNF790	Q6PG37	636 aa		18.84	■□□□□ 0.61
SDHD-209	ENST00000640554	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.83	■□□□□ 0.6
SDHD-209	ENST00000640554	BTBD11	A6QL63	1104 aa		18.83	■□□□□ 0.6
SDHD-209	ENST00000640554	RPS6KA4	O75676	772 aa		18.83	■□□□□ 0.6
SDHD-209	ENST00000640554	SLC39A6	Q13433	755 aa		18.83	■□□□□ 0.6
SDHD-209	ENST00000640554	TRAPPC3L	Q5T215	181 aa		18.83	■□□□□ 0.6
SDHD-209	ENST00000640554	SGIP1	Q9BQI5	828 aa		18.83	■□□□□ 0.6
SDHD-209	ENST00000640554	C5	P01031	1676 aa		18.82	■□□□□ 0.6
SDHD-209	ENST00000640554	LMOD3	Q0VAK6	560 aa		18.82	■□□□□ 0.6
SDHD-209	ENST00000640554	TAF7	Q15545	349 aa	Predicted RBP	18.82	■□□□□ 0.6
SDHD-209	ENST00000640554	PNISR	Q8TF01	805 aa	Known RBP	18.82	■□□□□ 0.6
SDHD-209	ENST00000640554	QSER1	Q2KHR3	1735 aa		18.82	■□□□□ 0.6
SDHD-209	ENST00000640554	C4B	P0C0L5	1744 aa		18.81	■□□□□ 0.6
SDHD-209	ENST00000640554	STARD3NL	O95772	234 aa		18.81	■□□□□ 0.6
SDHD-209	ENST00000640554	MCM10	Q7L590	875 aa		18.81	■□□□□ 0.6
SDHD-209	ENST00000640554	RUNDC1	Q96C34	613 aa		18.81	■□□□□ 0.6
SDHD-209	ENST00000640554	FMNL2	Q96PY5	1086 aa		18.81	■□□□□ 0.6
SDHD-209	ENST00000640554	ARX	Q96QS3	562 aa		18.81	■□□□□ 0.6
SDHD-209	ENST00000640554	CRKL	P46109	303 aa	Known RBP	18.8	■□□□□ 0.6
SDHD-209	ENST00000640554	ADAMTS8	Q9UP79	889 aa		18.8	■□□□□ 0.6
SDHD-209	ENST00000640554	DNAJC10	Q8IXB1	793 aa		18.79	■□□□□ 0.6
SDHD-209	ENST00000640554	PHF14	O94880	888 aa		18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	CYP19A1	P11511	503 aa	Predicted RBP	18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	TMPO	P42166	694 aa	Known RBP	18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	RIPK4	P57078	832 aa		18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	ZNF496	Q96IT1	587 aa	Predicted RBP	18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	CCDC87	Q9NVE4	849 aa		18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	TAF1L	Q8IZX4	1826 aa		18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	HEG1	Q9ULI3	1381 aa		18.78	■□□□□ 0.6
SDHD-209	ENST00000640554	RFC4	P35249	363 aa		18.77	■□□□□ 0.6
SDHD-209	ENST00000640554	DCTN1	Q14203	1278 aa		18.77	■□□□□ 0.6
SDHD-209	ENST00000640554	INTS5	Q6P9B9	1019 aa	Known RBP	18.77	■□□□□ 0.6
SDHD-209	ENST00000640554	NLGN1	Q8N2Q7	840 aa		18.77	■□□□□ 0.6
SDHD-209	ENST00000640554	BABAM1	Q9NWV8	329 aa		18.77	■□□□□ 0.6
SDHD-209	ENST00000640554	ARHGEF1	Q92888	912 aa	Known RBP	18.76	■□□□□ 0.59
SDHD-209	ENST00000640554	KCP	Q6ZWJ8	1503 aa		18.75	■□□□□ 0.59
SDHD-209	ENST00000640554	DCAF8L1	A6NGE4	600 aa		18.75	■□□□□ 0.59
SDHD-209	ENST00000640554	AMIGO3	Q86WK7	504 aa		18.75	■□□□□ 0.59
SDHD-209	ENST00000640554	CIC	Q96RK0	1608 aa	Predicted RBP	18.74	■□□□□ 0.59
SDHD-209	ENST00000640554	SNRPA1	P09661	255 aa	Known RBP	18.74	■□□□□ 0.59
SDHD-209	ENST00000640554	SYT17	Q9BSW7	474 aa		18.73	■□□□□ 0.59
SDHD-209	ENST00000640554		A0A087WZG4	1122 aa		18.72	■□□□□ 0.59
SDHD-209	ENST00000640554	CCDC146	Q8IYE0	955 aa		18.72	■□□□□ 0.59
SDHD-209	ENST00000640554	FHDC1	Q9C0D6	1143 aa	Predicted RBP	18.72	■□□□□ 0.59
SDHD-209	ENST00000640554	SOS1	Q07889	1333 aa	Predicted RBP	18.72	■□□□□ 0.59
SDHD-209	ENST00000640554	KCNQ3	O43525	872 aa		18.71	■□□□□ 0.59
SDHD-209	ENST00000640554	MSL1	Q68DK7	614 aa		18.71	■□□□□ 0.59
SDHD-209	ENST00000640554	NPM2	Q86SE8	214 aa	Known RBP	18.71	■□□□□ 0.59
SDHD-209	ENST00000640554	ZPR1	O75312	459 aa		18.7	■□□□□ 0.58
SDHD-209	ENST00000640554	UBR3	Q6ZT12	1888 aa		18.7	■□□□□ 0.58
SDHD-209	ENST00000640554	SMIM5	Q71RC9	77 aa		18.7	■□□□□ 0.58
SDHD-209	ENST00000640554	MRS2	Q9HD23	443 aa		18.7	■□□□□ 0.58
SDHD-209	ENST00000640554	GYS1	P13807	737 aa		18.69	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms