RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
MECP2-226ENST00000640414 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
MECP2-226ENST00000640414 LOC102724428A0A0B4J2F2 783 aa16.22■□□□□ 0.19
MECP2-226ENST00000640414 SIK1P57059 783 aa16.22■□□□□ 0.19
MECP2-226ENST00000640414 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
MECP2-226ENST00000640414 RRAGCQ9HB90 399 aa16.22■□□□□ 0.19
MECP2-226ENST00000640414 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.19
MECP2-226ENST00000640414 SLC34A2O95436 690 aa16.21■□□□□ 0.19
MECP2-226ENST00000640414 ITPK1Q13572 414 aa16.21■□□□□ 0.19
MECP2-226ENST00000640414 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
MECP2-226ENST00000640414 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
MECP2-226ENST00000640414 PCNTO95613 3336 aa16.2■□□□□ 0.18
MECP2-226ENST00000640414 RRS1Q15050 365 aaKnown RBP16.2■□□□□ 0.18
MECP2-226ENST00000640414 SMC1BQ8NDV3 1235 aa16.2■□□□□ 0.18
MECP2-226ENST00000640414 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
MECP2-226ENST00000640414 KCNA3P22001 575 aa16.19■□□□□ 0.18
MECP2-226ENST00000640414 NLGN1Q8N2Q7 840 aa16.18■□□□□ 0.18
MECP2-226ENST00000640414 ATP6V1AP38606 617 aa16.17■□□□□ 0.18
MECP2-226ENST00000640414 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
MECP2-226ENST00000640414 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
MECP2-226ENST00000640414 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
MECP2-226ENST00000640414 TMF1P82094 1093 aa16.16■□□□□ 0.18
MECP2-226ENST00000640414 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
MECP2-226ENST00000640414 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
MECP2-226ENST00000640414 DCAF5Q96JK2 942 aa16.16■□□□□ 0.18
MECP2-226ENST00000640414 ASAP1Q9ULH1 1129 aa16.16■□□□□ 0.18
MECP2-226ENST00000640414 TRAPPC3LQ5T215 181 aa16.15■□□□□ 0.18
MECP2-226ENST00000640414 PUS7Q96PZ0 661 aaKnown RBP16.15■□□□□ 0.18
MECP2-226ENST00000640414 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
MECP2-226ENST00000640414 INSRP06213 1382 aa16.14■□□□□ 0.17
MECP2-226ENST00000640414 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
MECP2-226ENST00000640414 SBF1O95248 1867 aa16.14■□□□□ 0.17
MECP2-226ENST00000640414 GYS1P13807 737 aa16.13■□□□□ 0.17
MECP2-226ENST00000640414 DALRD3Q5D0E6 543 aaKnown RBP16.13■□□□□ 0.17
MECP2-226ENST00000640414 ARHGEF1Q92888 912 aaKnown RBP16.13■□□□□ 0.17
MECP2-226ENST00000640414 TMOD3Q9NYL9 352 aa16.13■□□□□ 0.17
MECP2-226ENST00000640414 PARP3Q9Y6F1 533 aa16.13■□□□□ 0.17
MECP2-226ENST00000640414 CARD11Q9BXL7 1154 aa16.12■□□□□ 0.17
MECP2-226ENST00000640414 KDRP35968 1356 aa16.12■□□□□ 0.17
MECP2-226ENST00000640414 GGNBP2Q9H3C7 697 aa16.11■□□□□ 0.17
MECP2-226ENST00000640414 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
MECP2-226ENST00000640414 FLT4P35916 1363 aa16.11■□□□□ 0.17
MECP2-226ENST00000640414 FYB1O15117 783 aa16.1■□□□□ 0.17
MECP2-226ENST00000640414 TIMELESSQ9UNS1 1208 aa16.1■□□□□ 0.17
MECP2-226ENST00000640414 ADRA2BP18089 450 aa16.09■□□□□ 0.17
MECP2-226ENST00000640414 SLC4A9Q96Q91 983 aa16.09■□□□□ 0.17
MECP2-226ENST00000640414 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
MECP2-226ENST00000640414 NCAPD2Q15021 1401 aa16.09■□□□□ 0.17
MECP2-226ENST00000640414 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
MECP2-226ENST00000640414 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
MECP2-226ENST00000640414 CHRNA5P30532 468 aa16.08■□□□□ 0.16
MECP2-226ENST00000640414 RFC4P35249 363 aa16.08■□□□□ 0.16
MECP2-226ENST00000640414 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.16
MECP2-226ENST00000640414 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.16
MECP2-226ENST00000640414 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
MECP2-226ENST00000640414 KIF24Q5T7B8 1368 aa16.07■□□□□ 0.16
MECP2-226ENST00000640414 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
MECP2-226ENST00000640414 CNTNAP4Q9C0A0 1308 aa16.06■□□□□ 0.16
MECP2-226ENST00000640414 GLTPD2A6NH11 291 aa16.06■□□□□ 0.16
MECP2-226ENST00000640414 RPS6KA4O75676 772 aa16.06■□□□□ 0.16
MECP2-226ENST00000640414 RASSF7Q02833 373 aa16.06■□□□□ 0.16
MECP2-226ENST00000640414 PHKG2P15735 406 aa16.05■□□□□ 0.16
MECP2-226ENST00000640414 DDR1Q08345 913 aa16.05■□□□□ 0.16
MECP2-226ENST00000640414 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
MECP2-226ENST00000640414 IFNL2Q8IZJ0 200 aa16.04■□□□□ 0.16
MECP2-226ENST00000640414 TESK2Q96S53 571 aa16.04■□□□□ 0.16
MECP2-226ENST00000640414 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
MECP2-226ENST00000640414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.16
MECP2-226ENST00000640414 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
MECP2-226ENST00000640414 TIAM2Q8IVF5 1701 aa16.03■□□□□ 0.16
MECP2-226ENST00000640414 FOXN1O15353 648 aa16.03■□□□□ 0.16
MECP2-226ENST00000640414 FKBP8Q14318 412 aa16.03■□□□□ 0.16
MECP2-226ENST00000640414 SRP68Q9UHB9 627 aaKnown RBP16.03■□□□□ 0.16
MECP2-226ENST00000640414 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
MECP2-226ENST00000640414 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
MECP2-226ENST00000640414 POTECB2RU33 542 aa16.02■□□□□ 0.16
MECP2-226ENST00000640414 LMNB1P20700 586 aa16.02■□□□□ 0.16
MECP2-226ENST00000640414 KIF20BQ96Q89 1820 aa16.02■□□□□ 0.16
MECP2-226ENST00000640414 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
MECP2-226ENST00000640414 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
MECP2-226ENST00000640414 EYA1Q99502 592 aa16■□□□□ 0.15
MECP2-226ENST00000640414 CREBZFQ9NS37 354 aa16■□□□□ 0.15
MECP2-226ENST00000640414 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
MECP2-226ENST00000640414 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
MECP2-226ENST00000640414 FAM161AQ3B820 660 aa15.98■□□□□ 0.15
MECP2-226ENST00000640414 CCDC88AQ3V6T2 1871 aa15.98■□□□□ 0.15
MECP2-226ENST00000640414 ANKRD26Q9UPS8 1709 aa15.98■□□□□ 0.15
MECP2-226ENST00000640414 ERVV-2B6SEH9 535 aa15.97■□□□□ 0.15
MECP2-226ENST00000640414 PPM1GO15355 546 aaPredicted RBP15.97■□□□□ 0.15
MECP2-226ENST00000640414 TM4SF1P30408 202 aa15.97■□□□□ 0.15
MECP2-226ENST00000640414 PCDH10Q9P2E7 1040 aa15.97■□□□□ 0.15
MECP2-226ENST00000640414 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
MECP2-226ENST00000640414 DLEC1Q9Y238 1755 aa15.96■□□□□ 0.15
MECP2-226ENST00000640414 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
MECP2-226ENST00000640414 CTCFP49711 727 aaPredicted RBP15.96■□□□□ 0.15
MECP2-226ENST00000640414 CNTNAP1P78357 1384 aa15.96■□□□□ 0.15
MECP2-226ENST00000640414 NFKBIEO00221 500 aa15.95■□□□□ 0.14
MECP2-226ENST00000640414 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
MECP2-226ENST00000640414 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
MECP2-226ENST00000640414 TJP1Q07157 1748 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms