RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-256ENST00000639848 NFATC2IPQ8NCF5 419 aa27■■□□□ 1.91
HLA-B-256ENST00000639848 MRC1P22897 1456 aa27■■□□□ 1.91
HLA-B-256ENST00000639848 C5P01031 1676 aa26.99■■□□□ 1.91
HLA-B-256ENST00000639848 SLC52A2Q9HAB3 445 aa26.99■■□□□ 1.91
HLA-B-256ENST00000639848 LGR6Q9HBX8 967 aa26.98■■□□□ 1.91
HLA-B-256ENST00000639848 MAP3K5Q99683 1374 aa26.97■■□□□ 1.91
HLA-B-256ENST00000639848 ADAMTS7Q9UKP4 1686 aa26.97■■□□□ 1.91
HLA-B-256ENST00000639848 SCN11AQ9UI33 1791 aa26.97■■□□□ 1.91
HLA-B-256ENST00000639848 GNAT3A8MTJ3 354 aa26.96■■□□□ 1.91
HLA-B-256ENST00000639848 ATP6V1AP38606 617 aa26.96■■□□□ 1.91
HLA-B-256ENST00000639848 FLAD1Q8NFF5 587 aa26.96■■□□□ 1.91
HLA-B-256ENST00000639848 MYBBP1AQ9BQG0 1328 aaKnown RBP26.95■■□□□ 1.91
HLA-B-256ENST00000639848 PTGER2P43116 358 aa26.95■■□□□ 1.9
HLA-B-256ENST00000639848 PHACTR3Q96KR7 559 aa26.95■■□□□ 1.9
HLA-B-256ENST00000639848 AK7Q96M32 723 aa26.95■■□□□ 1.9
HLA-B-256ENST00000639848 ATF5Q9Y2D1 282 aaPredicted RBP26.95■■□□□ 1.9
HLA-B-256ENST00000639848 ZNF831Q5JPB2 1677 aa26.95■■□□□ 1.9
HLA-B-256ENST00000639848 C4BP0C0L5 1744 aa26.94■■□□□ 1.9
HLA-B-256ENST00000639848 ITPK1Q13572 414 aa26.94■■□□□ 1.9
HLA-B-256ENST00000639848 PPP1R1BQ9UD71 204 aaPredicted RBP26.94■■□□□ 1.9
HLA-B-256ENST00000639848 TAF1LQ8IZX4 1826 aa26.94■■□□□ 1.9
HLA-B-256ENST00000639848 LINC00116Q8NCU8 138 aa26.93■■□□□ 1.9
HLA-B-256ENST00000639848 SGIP1Q9BQI5 828 aa26.93■■□□□ 1.9
HLA-B-256ENST00000639848 RBM42Q9BTD8 480 aaKnown RBP26.93■■□□□ 1.9
HLA-B-256ENST00000639848 SLC4A9Q96Q91 983 aa26.92■■□□□ 1.9
HLA-B-256ENST00000639848 TUBGCP6Q96RT7 1819 aa26.9■■□□□ 1.9
HLA-B-256ENST00000639848 COL23A1Q86Y22 540 aaPredicted RBP26.9■■□□□ 1.9
HLA-B-256ENST00000639848 PTCD1O75127 700 aaKnown RBP26.89■■□□□ 1.9
HLA-B-256ENST00000639848 SSFA2P28290 1259 aa26.89■■□□□ 1.9
HLA-B-256ENST00000639848 IL17REQ8NFR9 667 aa26.89■■□□□ 1.9
HLA-B-256ENST00000639848 CEMIPQ8WUJ3 1361 aa26.88■■□□□ 1.89
HLA-B-256ENST00000639848 NEFMP07197 916 aa26.88■■□□□ 1.89
HLA-B-256ENST00000639848 PNNQ9H307 717 aaKnown RBP26.88■■□□□ 1.89
HLA-B-256ENST00000639848 PRKRIP1Q9H875 184 aaPredicted RBP26.88■■□□□ 1.89
HLA-B-256ENST00000639848 TEFQ10587 303 aa26.87■■□□□ 1.89
HLA-B-256ENST00000639848 RC3H1Q5TC82 1133 aaKnown RBP26.87■■□□□ 1.89
HLA-B-256ENST00000639848 ZNF316A6NFI3 1004 aaPredicted RBP26.86■■□□□ 1.89
HLA-B-256ENST00000639848 MSH5O43196 834 aa26.86■■□□□ 1.89
HLA-B-256ENST00000639848 CNTNAP4Q9C0A0 1308 aa26.86■■□□□ 1.89
HLA-B-256ENST00000639848 HTATSF1O43719 755 aaKnown RBP26.85■■□□□ 1.89
HLA-B-256ENST00000639848 CICQ96RK0 1608 aaPredicted RBP26.85■■□□□ 1.89
HLA-B-256ENST00000639848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.84■■□□□ 1.89
HLA-B-256ENST00000639848 GNPATO15228 680 aa26.84■■□□□ 1.89
HLA-B-256ENST00000639848 PLEKHF1Q96S99 279 aa26.84■■□□□ 1.89
HLA-B-256ENST00000639848 POLD1P28340 1107 aa26.83■■□□□ 1.89
HLA-B-256ENST00000639848 AMIGO3Q86WK7 504 aa26.83■■□□□ 1.89
HLA-B-256ENST00000639848 RTF1Q92541 710 aaKnown RBP26.83■■□□□ 1.89
HLA-B-256ENST00000639848 ARXQ96QS3 562 aa26.83■■□□□ 1.89
HLA-B-256ENST00000639848 SLC39A6Q13433 755 aa26.82■■□□□ 1.88
HLA-B-256ENST00000639848 COL24A1Q17RW2 1714 aa26.82■■□□□ 1.88
HLA-B-256ENST00000639848 UBR3Q6ZT12 1888 aa26.81■■□□□ 1.88
HLA-B-256ENST00000639848 PHF14O94880 888 aa26.81■■□□□ 1.88
HLA-B-256ENST00000639848 VSIG10Q8N0Z9 540 aa26.81■■□□□ 1.88
HLA-B-256ENST00000639848 RTCBQ9Y3I0 505 aaKnown RBP26.81■■□□□ 1.88
HLA-B-256ENST00000639848 KCPQ6ZWJ8 1503 aa26.8■■□□□ 1.88
HLA-B-256ENST00000639848 COL5A3P25940 1745 aaPredicted RBP26.8■■□□□ 1.88
HLA-B-256ENST00000639848 ADRA2BP18089 450 aa26.8■■□□□ 1.88
HLA-B-256ENST00000639848 TTC5Q8N0Z6 440 aa26.79■■□□□ 1.88
HLA-B-256ENST00000639848 VIRMAQ69YN4 1812 aaKnown RBP26.79■■□□□ 1.88
HLA-B-256ENST00000639848 RPS6KA4O75676 772 aa26.78■■□□□ 1.88
HLA-B-256ENST00000639848 ZNF790Q6PG37 636 aa26.78■■□□□ 1.88
HLA-B-256ENST00000639848 MAPK8IP3Q9UPT6 1336 aa26.78■■□□□ 1.88
HLA-B-256ENST00000639848 CRKLP46109 303 aaKnown RBP26.77■■□□□ 1.88
HLA-B-256ENST00000639848 TJP1Q07157 1748 aa26.76■■□□□ 1.88
HLA-B-256ENST00000639848 NFE2L2Q16236 605 aa26.76■■□□□ 1.87
HLA-B-256ENST00000639848 TRAPPC3LQ5T215 181 aa26.76■■□□□ 1.87
HLA-B-256ENST00000639848 DNAJC10Q8IXB1 793 aa26.76■■□□□ 1.87
HLA-B-256ENST00000639848 FHDC1Q9C0D6 1143 aaPredicted RBP26.76■■□□□ 1.87
HLA-B-256ENST00000639848 SMIM5Q71RC9 77 aa26.75■■□□□ 1.87
HLA-B-256ENST00000639848 MCM10Q7L590 875 aa26.75■■□□□ 1.87
HLA-B-256ENST00000639848 SIPA1L3O60292 1781 aaPredicted RBP26.75■■□□□ 1.87
HLA-B-256ENST00000639848 UBR2Q8IWV8 1755 aa26.74■■□□□ 1.87
HLA-B-256ENST00000639848 BTBD11A6QL63 1104 aa26.74■■□□□ 1.87
HLA-B-256ENST00000639848 MSL1Q68DK7 614 aa26.74■■□□□ 1.87
HLA-B-256ENST00000639848 CYP19A1P11511 503 aaPredicted RBP26.73■■□□□ 1.87
HLA-B-256ENST00000639848 WDR43Q15061 677 aaKnown RBP eCLIP26.73■■□□□ 1.87
HLA-B-256ENST00000639848 SYT17Q9BSW7 474 aa26.73■■□□□ 1.87
HLA-B-256ENST00000639848 INTS5Q6P9B9 1019 aaKnown RBP26.72■■□□□ 1.87
HLA-B-256ENST00000639848 ZNF496Q96IT1 587 aaPredicted RBP26.72■■□□□ 1.87
HLA-B-256ENST00000639848 CCDC87Q9NVE4 849 aa26.72■■□□□ 1.87
HLA-B-256ENST00000639848 HEG1Q9ULI3 1381 aa26.71■■□□□ 1.87
HLA-B-256ENST00000639848 DCTN1Q14203 1278 aa26.71■■□□□ 1.87
HLA-B-256ENST00000639848 ARHGEF1Q92888 912 aaKnown RBP26.71■■□□□ 1.87
HLA-B-256ENST00000639848 FMNL2Q96PY5 1086 aa26.71■■□□□ 1.87
HLA-B-256ENST00000639848 TEX13AQ9BXU3 409 aaPredicted RBP26.71■■□□□ 1.87
HLA-B-256ENST00000639848 STARD3NLO95772 234 aa26.69■■□□□ 1.86
HLA-B-256ENST00000639848 RFC4P35249 363 aa26.69■■□□□ 1.86
HLA-B-256ENST00000639848 TAF7Q15545 349 aaPredicted RBP26.68■■□□□ 1.86
HLA-B-256ENST00000639848 MYH14Q7Z406 1995 aaKnown RBP26.67■■□□□ 1.86
HLA-B-256ENST00000639848 NLGN1Q8N2Q7 840 aa26.67■■□□□ 1.86
HLA-B-256ENST00000639848 PNISRQ8TF01 805 aaKnown RBP26.66■■□□□ 1.86
HLA-B-256ENST00000639848 SOS1Q07889 1333 aaPredicted RBP26.65■■□□□ 1.86
HLA-B-256ENST00000639848 DCAF8L1A6NGE4 600 aa26.65■■□□□ 1.86
HLA-B-256ENST00000639848 RUNDC1Q96C34 613 aa26.65■■□□□ 1.86
HLA-B-256ENST00000639848 KCNQ3O43525 872 aa26.64■■□□□ 1.86
HLA-B-256ENST00000639848 GYS1P13807 737 aa26.64■■□□□ 1.86
HLA-B-256ENST00000639848 TMPOP42166 694 aaKnown RBP26.64■■□□□ 1.86
HLA-B-256ENST00000639848 LMOD3Q0VAK6 560 aa26.64■■□□□ 1.86
HLA-B-256ENST00000639848 ADAMTS8Q9UP79 889 aa26.64■■□□□ 1.86
HLA-B-256ENST00000639848 ZBTB1Q9Y2K1 713 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms