RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 CRYBG1Q9Y4K1 1723 aa7.5□□□□□ -1.21
HNRNPU-220ENST00000639667 CDCA7LQ96GN5 454 aa7.5□□□□□ -1.21
HNRNPU-220ENST00000639667 GLI3P10071 1580 aa7.5□□□□□ -1.21
HNRNPU-220ENST00000639667 FMNL2Q96PY5 1086 aa7.49□□□□□ -1.21
HNRNPU-220ENST00000639667 NWD2Q9ULI1 1742 aa7.49□□□□□ -1.21
HNRNPU-220ENST00000639667 RGPD2P0DJD1 1756 aa7.49□□□□□ -1.21
HNRNPU-220ENST00000639667 CANXP27824 592 aaKnown RBP7.49□□□□□ -1.21
HNRNPU-220ENST00000639667 DISP2A7MBM2 1401 aa7.49□□□□□ -1.21
HNRNPU-220ENST00000639667 USP54Q70EL1 1684 aa7.49□□□□□ -1.21
HNRNPU-220ENST00000639667 ZNF790Q6PG37 636 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 PHF14O94880 888 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 NKX1-1Q15270 411 aaPredicted RBP7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 EZH2Q15910 746 aaKnown RBP7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 KRT24Q2M2I5 525 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 WDR63Q8IWG1 891 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 E9PSI1 815 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 PIP4K2AP48426 406 aaPredicted RBP7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 ZNF496Q96IT1 587 aaPredicted RBP7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 AK7Q96M32 723 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 CFAP44Q96MT7 982 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 MBIPQ9NS73 344 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 ATG3Q9NT62 314 aa7.48□□□□□ -1.21
HNRNPU-220ENST00000639667 LOC102724428A0A0B4J2F2 783 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 STARD3NLO95772 234 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 MYL6BP14649 208 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 SIK1P57059 783 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 DNAJC10Q8IXB1 793 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 IFT57Q9NWB7 429 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 PALLDQ8WX93 1383 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 AIMP1Q12904 312 aaKnown RBP7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 TXNRD1Q16881 649 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 NBPF14Q5TI25 921 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 STK31Q9BXU1 1019 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 NPHP1O15259 732 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 DUSP27Q5VZP5 1158 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 TFCP2L1Q9NZI6 479 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 NRAPQ86VF7 1730 aa7.47□□□□□ -1.21
HNRNPU-220ENST00000639667 SNRPA1P09661 255 aaKnown RBP7.46□□□□□ -1.21
HNRNPU-220ENST00000639667 HDGFL1Q5TGJ6 251 aa7.46□□□□□ -1.21
HNRNPU-220ENST00000639667 UPF1Q92900 1129 aaKnown RBP eCLIP7.46□□□□□ -1.21
HNRNPU-220ENST00000639667 BCL2L13Q9BXK5 485 aa7.46□□□□□ -1.21
HNRNPU-220ENST00000639667 STK32BQ9NY57 414 aa7.46□□□□□ -1.21
HNRNPU-220ENST00000639667 TWISTNBQ3B726 338 aaPredicted RBP7.46□□□□□ -1.22
HNRNPU-220ENST00000639667 KDM6AO15550 1401 aaPredicted RBP7.46□□□□□ -1.22
HNRNPU-220ENST00000639667 GNPATO15228 680 aa7.46□□□□□ -1.22
HNRNPU-220ENST00000639667 ANXA1P04083 346 aa7.46□□□□□ -1.22
HNRNPU-220ENST00000639667 PRAMEF22A3QJZ6 481 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 CCDC27Q2M243 656 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 FRAT1Q92837 279 aaPredicted RBP7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 SPINK5Q9NQ38 1064 aaPredicted RBP7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 ZBED9Q6R2W3 1325 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 FANCIQ9NVI1 1328 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 CHL1O00533 1208 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 A1BGP04217 495 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 CCDC125Q86Z20 511 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 NCAPD2Q15021 1401 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 EIF4A1P60842 406 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 PELP1Q8IZL8 1130 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 C8orf58Q8NAV2 365 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 TEX13AQ9BXU3 409 aaPredicted RBP7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 USP16Q9Y5T5 823 aa7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 FAM208AQ9UK61 1670 aaKnown RBP7.45□□□□□ -1.22
HNRNPU-220ENST00000639667 SLFN5Q08AF3 891 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 SMIM5Q71RC9 77 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 ZNF428Q96B54 188 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 SMC4Q9NTJ3 1288 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 TSPYL6Q8N831 410 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 PSDA5PKW4 1024 aaPredicted RBP7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 FAM177BA6PVY3 158 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 CCDC30Q5VVM6 783 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 CHMP4AQ9BY43 222 aa7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 RTCBQ9Y3I0 505 aaKnown RBP7.44□□□□□ -1.22
HNRNPU-220ENST00000639667 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 PARP4Q9UKK3 1724 aaKnown RBP7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 IL16Q14005 1332 aa7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 RFC4P35249 363 aa7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 CCDC87Q9NVE4 849 aa7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 BCL9O00512 1426 aa7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 CRKLP46109 303 aaKnown RBP7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 ITPK1Q13572 414 aa7.43□□□□□ -1.22
HNRNPU-220ENST00000639667 ZPR1O75312 459 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 SLC4A2P04920 1241 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 HMGB2P26583 209 aaKnown RBP7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 R3HDM1Q15032 1099 aaKnown RBP7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 TBC1D2BQ9UPU7 963 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 CEMIPQ8WUJ3 1361 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 GIGYF1O75420 1035 aaPredicted RBP7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 SLC27A3Q5K4L6 730 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 SLC4A10Q6U841 1118 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 KIF6Q6ZMV9 814 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 PLSCR1O15162 318 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 TRAPPC3LQ5T215 181 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 RIC3Q7Z5B4 369 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 LINC00116Q8NCU8 138 aa7.42□□□□□ -1.22
HNRNPU-220ENST00000639667 BABAM1Q9NWV8 329 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms