RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-222ENST00000639482 MON2Q7Z3U7 1717 aa12.3□□□□□ -0.44
SPIN3-222ENST00000639482 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
SPIN3-222ENST00000639482 GNAI1P63096 354 aa12.3□□□□□ -0.44
SPIN3-222ENST00000639482 RILPL2Q969X0 211 aa12.29□□□□□ -0.44
SPIN3-222ENST00000639482 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
SPIN3-222ENST00000639482 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
SPIN3-222ENST00000639482 F6X3S4 739 aa12.29□□□□□ -0.44
SPIN3-222ENST00000639482 NUCB2P80303 420 aa12.29□□□□□ -0.44
SPIN3-222ENST00000639482 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
SPIN3-222ENST00000639482 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
SPIN3-222ENST00000639482 UPF3BQ9BZI7 483 aaKnown RBP12.29□□□□□ -0.44
SPIN3-222ENST00000639482 LMBRD1Q9NUN5 540 aa12.29□□□□□ -0.44
SPIN3-222ENST00000639482 AK9Q5TCS8 1911 aa12.29□□□□□ -0.44
SPIN3-222ENST00000639482 TPM2P07951 284 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 MEIS3Q99687 375 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 UQCRHP07919 91 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 PROSER2Q86WR7 435 aaPredicted RBP12.28□□□□□ -0.44
SPIN3-222ENST00000639482 EXOC6BQ9Y2D4 811 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 AKAP12Q02952 1782 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 PTMSP20962 102 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 GPT2Q8TD30 523 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 JARID2Q92833 1246 aaPredicted RBP12.28□□□□□ -0.44
SPIN3-222ENST00000639482 ZNF428Q96B54 188 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 ZNF830Q96NB3 372 aaPredicted RBP12.28□□□□□ -0.44
SPIN3-222ENST00000639482 USP26Q9BXU7 913 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
SPIN3-222ENST00000639482 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 IL16Q14005 1332 aa12.28□□□□□ -0.44
SPIN3-222ENST00000639482 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.27□□□□□ -0.44
SPIN3-222ENST00000639482 TSC1Q92574 1164 aa12.27□□□□□ -0.44
SPIN3-222ENST00000639482 CFAP44Q96MT7 982 aa12.27□□□□□ -0.44
SPIN3-222ENST00000639482 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.44
SPIN3-222ENST00000639482 NCOA3Q9Y6Q9 1424 aa12.27□□□□□ -0.44
SPIN3-222ENST00000639482 HOXC9P31274 260 aa12.27□□□□□ -0.45
SPIN3-222ENST00000639482 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
SPIN3-222ENST00000639482 ANO2Q9NQ90 1003 aa12.27□□□□□ -0.45
SPIN3-222ENST00000639482 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
SPIN3-222ENST00000639482 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
SPIN3-222ENST00000639482 SSH2Q76I76 1423 aa12.27□□□□□ -0.45
SPIN3-222ENST00000639482 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
SPIN3-222ENST00000639482 PTCH1Q13635 1447 aa12.26□□□□□ -0.45
SPIN3-222ENST00000639482 OFD1O75665 1012 aa12.26□□□□□ -0.45
SPIN3-222ENST00000639482 ZNF853P0CG23 659 aa12.26□□□□□ -0.45
SPIN3-222ENST00000639482 ZC3H6P61129 1189 aaKnown RBP12.25□□□□□ -0.45
SPIN3-222ENST00000639482 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
SPIN3-222ENST00000639482 MAP4K4O95819 1239 aaPredicted RBP12.25□□□□□ -0.45
SPIN3-222ENST00000639482 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
SPIN3-222ENST00000639482 PPP1R9BQ96SB3 815 aa12.25□□□□□ -0.45
SPIN3-222ENST00000639482 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
SPIN3-222ENST00000639482 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 C17orf53Q8N3J3 647 aaPredicted RBP12.24□□□□□ -0.45
SPIN3-222ENST00000639482 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
SPIN3-222ENST00000639482 TTC21AQ8NDW8 1320 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 PDCL3Q9H2J4 239 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 G2E3Q7L622 706 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 DCTPP1Q9H773 170 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 ZDHHC9Q9Y397 364 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 FLT4P35916 1363 aa12.24□□□□□ -0.45
SPIN3-222ENST00000639482 REC8O95072 547 aa12.23□□□□□ -0.45
SPIN3-222ENST00000639482 USP31Q70CQ4 1352 aa12.23□□□□□ -0.45
SPIN3-222ENST00000639482 TOPAZ1Q8N9V7 1692 aa12.23□□□□□ -0.45
SPIN3-222ENST00000639482 NRKQ7Z2Y5 1582 aa12.23□□□□□ -0.45
SPIN3-222ENST00000639482 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 PIK3C2AO00443 1686 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 CEP85Q6P2H3 762 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 ABCC4O15439 1325 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 ERC2O15083 957 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 LMOD3Q0VAK6 560 aa12.22□□□□□ -0.45
SPIN3-222ENST00000639482 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
SPIN3-222ENST00000639482 ZNF445P59923 1031 aa12.21□□□□□ -0.45
SPIN3-222ENST00000639482 PALD1Q9ULE6 856 aa12.21□□□□□ -0.45
SPIN3-222ENST00000639482 XRN1Q8IZH2 1706 aaKnown RBP12.21□□□□□ -0.45
SPIN3-222ENST00000639482 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
SPIN3-222ENST00000639482 IL1RAPL2Q9NP60 686 aa12.21□□□□□ -0.45
SPIN3-222ENST00000639482 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
SPIN3-222ENST00000639482 IL17REQ8NFR9 667 aa12.21□□□□□ -0.46
SPIN3-222ENST00000639482 DDX54Q8TDD1 881 aaKnown RBP12.21□□□□□ -0.46
SPIN3-222ENST00000639482 CHL1O00533 1208 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 ANKRD44Q8N8A2 993 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 ARHGAP45Q92619 1136 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 NALCNQ8IZF0 1738 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
SPIN3-222ENST00000639482 USP25Q9UHP3 1055 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 MSH6P52701 1360 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 ANXA1P04083 346 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 NOL7Q9UMY1 257 aaKnown RBP12.2□□□□□ -0.46
SPIN3-222ENST00000639482 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
SPIN3-222ENST00000639482 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
SPIN3-222ENST00000639482 KCNQ3O43525 872 aa12.19□□□□□ -0.46
SPIN3-222ENST00000639482 LRSAM1Q6UWE0 723 aa12.19□□□□□ -0.46
SPIN3-222ENST00000639482 GCP02774 474 aa12.19□□□□□ -0.46
SPIN3-222ENST00000639482 CHRNA2Q15822 529 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms