RNA–Protein interactions for RNA: ENST00000639419.1

TUBA1C-210, Transcript of tubulin alpha 1c, humanhuman

TSL 5 BASIC

Gene TUBA1C, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-210ENST00000639419 MAP3K5Q99683 1374 aa12.57□□□□□ -0.4
TUBA1C-210ENST00000639419 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
TUBA1C-210ENST00000639419 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
TUBA1C-210ENST00000639419 PHKG2P15735 406 aa12.56□□□□□ -0.4
TUBA1C-210ENST00000639419 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
TUBA1C-210ENST00000639419 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
TUBA1C-210ENST00000639419 AEBP1Q8IUX7 1158 aa12.56□□□□□ -0.4
TUBA1C-210ENST00000639419 ZNF784Q8NCA9 323 aaPredicted RBP12.56□□□□□ -0.4
TUBA1C-210ENST00000639419 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
TUBA1C-210ENST00000639419 WWC3Q9ULE0 1092 aa12.56□□□□□ -0.4
TUBA1C-210ENST00000639419 ITPK1Q13572 414 aa12.55□□□□□ -0.4
TUBA1C-210ENST00000639419 AK7Q96M32 723 aa12.55□□□□□ -0.4
TUBA1C-210ENST00000639419 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
TUBA1C-210ENST00000639419 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
TUBA1C-210ENST00000639419 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
TUBA1C-210ENST00000639419 COL3A1P02461 1466 aaPredicted RBP12.54□□□□□ -0.4
TUBA1C-210ENST00000639419 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
TUBA1C-210ENST00000639419 YBX3P16989 372 aaKnown RBP eCLIP12.54□□□□□ -0.46e-19■□□□□ 11
TUBA1C-210ENST00000639419 SIK1P57059 783 aa12.54□□□□□ -0.4
TUBA1C-210ENST00000639419 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
TUBA1C-210ENST00000639419 SMARCC1Q92922 1105 aaPredicted RBP12.54□□□□□ -0.4
TUBA1C-210ENST00000639419 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
TUBA1C-210ENST00000639419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
TUBA1C-210ENST00000639419 IL13P35225 146 aa12.53□□□□□ -0.4
TUBA1C-210ENST00000639419 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
TUBA1C-210ENST00000639419 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
TUBA1C-210ENST00000639419 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.4
TUBA1C-210ENST00000639419 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
TUBA1C-210ENST00000639419 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
TUBA1C-210ENST00000639419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.41
TUBA1C-210ENST00000639419 KDM6AO15550 1401 aaPredicted RBP12.52□□□□□ -0.41
TUBA1C-210ENST00000639419 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 GNPATO15228 680 aa12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.412e-9■■■□□ 17.5
TUBA1C-210ENST00000639419 ZNF530Q6P9A1 599 aaPredicted RBP12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
TUBA1C-210ENST00000639419 FCHSD2O94868 740 aa12.5□□□□□ -0.41
TUBA1C-210ENST00000639419 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
TUBA1C-210ENST00000639419 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
TUBA1C-210ENST00000639419 N4BP2Q86UW6 1770 aaPredicted RBP12.5□□□□□ -0.41
TUBA1C-210ENST00000639419 TJP1Q07157 1748 aa12.48□□□□□ -0.41
TUBA1C-210ENST00000639419 KDRP35968 1356 aa12.48□□□□□ -0.41
TUBA1C-210ENST00000639419 NEFMP07197 916 aa12.48□□□□□ -0.41
TUBA1C-210ENST00000639419 PLEKHO1Q53GL0 409 aaPredicted RBP12.48□□□□□ -0.41
TUBA1C-210ENST00000639419 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
TUBA1C-210ENST00000639419 RUNDC1Q96C34 613 aa12.47□□□□□ -0.41
TUBA1C-210ENST00000639419 KIAA1551Q9HCM1 1747 aa12.47□□□□□ -0.41
TUBA1C-210ENST00000639419 ZNF831Q5JPB2 1677 aa12.47□□□□□ -0.41
TUBA1C-210ENST00000639419 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
TUBA1C-210ENST00000639419 HMOX1P09601 288 aa12.46□□□□□ -0.41
TUBA1C-210ENST00000639419 SSFA2P28290 1259 aa12.46□□□□□ -0.41
TUBA1C-210ENST00000639419 CABP4P57796 275 aa12.46□□□□□ -0.41
TUBA1C-210ENST00000639419 NGEFQ8N5V2 710 aa12.46□□□□□ -0.41
TUBA1C-210ENST00000639419 DCAF5Q96JK2 942 aa12.46□□□□□ -0.41
TUBA1C-210ENST00000639419 CICQ96RK0 1608 aaPredicted RBP12.46□□□□□ -0.41
TUBA1C-210ENST00000639419 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
TUBA1C-210ENST00000639419 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
TUBA1C-210ENST00000639419 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
TUBA1C-210ENST00000639419 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
TUBA1C-210ENST00000639419 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
TUBA1C-210ENST00000639419 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
TUBA1C-210ENST00000639419 KIF13BQ9NQT8 1826 aa12.45□□□□□ -0.42
TUBA1C-210ENST00000639419 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
TUBA1C-210ENST00000639419 MMP10P09238 476 aa12.44□□□□□ -0.42
TUBA1C-210ENST00000639419 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 C1QTNF8P60827 252 aa12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 LGR6Q9HBX8 967 aa12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
TUBA1C-210ENST00000639419 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
TUBA1C-210ENST00000639419 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
TUBA1C-210ENST00000639419 ZNF526Q8TF50 670 aaPredicted RBP12.42□□□□□ -0.42
TUBA1C-210ENST00000639419 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
TUBA1C-210ENST00000639419 SENP3-EIF4A1A0A087X0R7 540 aa12.41□□□□□ -0.42
TUBA1C-210ENST00000639419 GRIN3BO60391 1043 aa12.41□□□□□ -0.42
TUBA1C-210ENST00000639419 BRCA1P38398 1863 aaKnown RBP12.41□□□□□ -0.42
TUBA1C-210ENST00000639419 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
TUBA1C-210ENST00000639419 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
TUBA1C-210ENST00000639419 ATP10DQ9P241 1426 aa12.41□□□□□ -0.42
TUBA1C-210ENST00000639419 ADAMTS7Q9UKP4 1686 aa12.41□□□□□ -0.42
TUBA1C-210ENST00000639419 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
TUBA1C-210ENST00000639419 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
TUBA1C-210ENST00000639419 APAF1O14727 1248 aa12.4□□□□□ -0.42
TUBA1C-210ENST00000639419 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
TUBA1C-210ENST00000639419 GYS1P13807 737 aa12.4□□□□□ -0.42
TUBA1C-210ENST00000639419 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
TUBA1C-210ENST00000639419 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
TUBA1C-210ENST00000639419 A0A0G2JLW4 131 aa12.39□□□□□ -0.43
TUBA1C-210ENST00000639419 RPS6KA4O75676 772 aa12.39□□□□□ -0.43
TUBA1C-210ENST00000639419 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
TUBA1C-210ENST00000639419 RFC4P35249 363 aa12.39□□□□□ -0.43
TUBA1C-210ENST00000639419 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
TUBA1C-210ENST00000639419 AKAP4Q5JQC9 854 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms