RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 NAA15Q9BXJ9 866 aaKnown RBP12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 NSRP1Q9H0G5 558 aaKnown RBP12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 HLTFQ14527 1009 aaKnown RBP eCLIP12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 WDR63Q8IWG1 891 aa12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 RNF168Q8IYW5 571 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
KCNMA1-259ENST00000639406 AMPHP49418 695 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 NGDNQ8NEJ9 315 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 SEPT11Q9NVA2 429 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 OPA1O60313 960 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 KIF4AO95239 1232 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 BAG4O95429 457 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 RPAINQ86UA6 219 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 AP1ARQ63HQ0 302 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 ZFYP08048 801 aaPredicted RBP12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 CERS3Q8IU89 383 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 ANKS4BQ8N8V4 417 aa12.67□□□□□ -0.38
KCNMA1-259ENST00000639406 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-259ENST00000639406 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-259ENST00000639406 U2AF2P26368 475 aaKnown RBP eCLIP12.66□□□□□ -0.38
KCNMA1-259ENST00000639406 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
KCNMA1-259ENST00000639406 CTAGE5O15320 804 aa12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 DDX46Q7L014 1031 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 KIF3CO14782 793 aa12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 SART3Q15020 963 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 USO1O60763 962 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 NBPF8Q3BBV2 869 aa12.65□□□□□ -0.38
KCNMA1-259ENST00000639406 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 SKAP1Q86WV1 359 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 CPLX3Q8WVH0 158 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 FEZ2Q9UHY8 353 aaPredicted RBP12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 DNAI1Q9UI46 699 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 HMGXB3Q12766 1538 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 CTAGE15A4D2H0 777 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 CTAGE8P0CG41 777 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 CTAGE6Q86UF2 777 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 CTAGE4Q8IX94 777 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 PLEKHH1Q9ULM0 1364 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 STX1AQ16623 288 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 DNA2P51530 1060 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 GOLGA1Q92805 767 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
KCNMA1-259ENST00000639406 GSTTP1A0A1W2PQM5 241 aa12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 YEATS4O95619 227 aa12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 SURF6O75683 361 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 SKILP12757 684 aa12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 DDX19AQ9NUU7 478 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 ALS2CR12Q96Q35 445 aa12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 GCKP35557 465 aa12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 DZIP1Q86YF9 867 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 TTC12Q9H892 705 aaPredicted RBP12.63□□□□□ -0.39
KCNMA1-259ENST00000639406 BUB1BO60566 1050 aaPredicted RBP12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 CCDC186Q7Z3E2 898 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 NESP48681 1621 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 DDX58O95786 925 aaKnown RBP12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 TUBB4AP04350 444 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 MATR3P43243 847 aaKnown RBP eCLIP12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 TERF1P54274 439 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 ANKRD18BA2A2Z9 1011 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 CKAP4Q07065 602 aaKnown RBP12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 INPP5BP32019 993 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 BLOC1S2Q6QNY1 142 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 FAM184BQ9ULE4 1060 aa12.62□□□□□ -0.39
KCNMA1-259ENST00000639406 PHACTR2O75167 634 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 MAP4K4O95819 1239 aaPredicted RBP12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 GNAI3P08754 354 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 JADE2Q9NQC1 790 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 FAM76AQ8TAV0 307 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 DMTNQ08495 405 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
KCNMA1-259ENST00000639406 ZEB2O60315 1214 aa12.6□□□□□ -0.39
KCNMA1-259ENST00000639406 NOL3O60936 208 aaKnown RBP12.6□□□□□ -0.39
KCNMA1-259ENST00000639406 ZNF165P49910 485 aa12.6□□□□□ -0.39
KCNMA1-259ENST00000639406 B4GALNT4Q76KP1 1039 aa12.6□□□□□ -0.39
KCNMA1-259ENST00000639406 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms