RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
SCARB2-215ENST00000639145 TDO2P48775 406 aa16.3■□□□□ 0.2
SCARB2-215ENST00000639145 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
SCARB2-215ENST00000639145 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
SCARB2-215ENST00000639145 NPATQ14207 1427 aa16.29■□□□□ 0.2
SCARB2-215ENST00000639145 IFIT1P09914 478 aaKnown RBP16.29■□□□□ 0.2
SCARB2-215ENST00000639145 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
SCARB2-215ENST00000639145 TEX13AQ9BXU3 409 aaPredicted RBP16.29■□□□□ 0.2
SCARB2-215ENST00000639145 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
SCARB2-215ENST00000639145 BTG4Q9NY30 223 aa16.29■□□□□ 0.2
SCARB2-215ENST00000639145 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
SCARB2-215ENST00000639145 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
SCARB2-215ENST00000639145 IL2RBP14784 551 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 XBP1P17861 261 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-215ENST00000639145 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
SCARB2-215ENST00000639145 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 CHD1O14646 1710 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 ZSCAN25Q6NSZ9 544 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
SCARB2-215ENST00000639145 RFC4P35249 363 aa16.27■□□□□ 0.2
SCARB2-215ENST00000639145 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
SCARB2-215ENST00000639145 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.2
SCARB2-215ENST00000639145 FLT4P35916 1363 aa16.27■□□□□ 0.2
SCARB2-215ENST00000639145 MX1P20591 662 aa16.27■□□□□ 0.19
SCARB2-215ENST00000639145 RABEP1Q15276 862 aa16.27■□□□□ 0.19
SCARB2-215ENST00000639145 CCDC73Q6ZRK6 1079 aa16.27■□□□□ 0.19
SCARB2-215ENST00000639145 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.19
SCARB2-215ENST00000639145 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.19
SCARB2-215ENST00000639145 ATP6V1AP38606 617 aa16.27■□□□□ 0.19
SCARB2-215ENST00000639145 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 C8orf58Q8NAV2 365 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
SCARB2-215ENST00000639145 BRMS1Q9HCU9 246 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 GLRX3O76003 335 aaKnown RBP16.26■□□□□ 0.19
SCARB2-215ENST00000639145 SKOR2Q2VWA4 1001 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-215ENST00000639145 CAVIN4Q5BKX8 364 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 ABCA8O94911 1581 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 CCAR1Q8IX12 1150 aaKnown RBP16.26■□□□□ 0.19
SCARB2-215ENST00000639145 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 TTC37Q6PGP7 1564 aa16.26■□□□□ 0.19
SCARB2-215ENST00000639145 ANKRD18BA2A2Z9 1011 aa16.25■□□□□ 0.19
SCARB2-215ENST00000639145 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
SCARB2-215ENST00000639145 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
SCARB2-215ENST00000639145 BLOC1S2Q6QNY1 142 aa16.25■□□□□ 0.19
SCARB2-215ENST00000639145 CWC25Q9NXE8 425 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-215ENST00000639145 CEBPZQ03701 1054 aaKnown RBP16.25■□□□□ 0.19
SCARB2-215ENST00000639145 SNRKQ9NRH2 765 aa16.25■□□□□ 0.19
SCARB2-215ENST00000639145 CCDC47Q96A33 483 aaKnown RBP16.25■□□□□ 0.19
SCARB2-215ENST00000639145 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
SCARB2-215ENST00000639145 HOXC9P31274 260 aa16.24■□□□□ 0.19
SCARB2-215ENST00000639145 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
SCARB2-215ENST00000639145 SLAIN2Q9P270 581 aa16.24■□□□□ 0.19
SCARB2-215ENST00000639145 PLEKHH1Q9ULM0 1364 aa16.24■□□□□ 0.19
SCARB2-215ENST00000639145 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
SCARB2-215ENST00000639145 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
SCARB2-215ENST00000639145 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 ABCC1P33527 1531 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 ASXL1Q8IXJ9 1541 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 PTPRCP08575 1304 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 TMEM2Q9UHN6 1383 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 NBPF6Q5VWK0 638 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 NBPF5PQ86XG9 351 aaPredicted RBP16.23■□□□□ 0.19
SCARB2-215ENST00000639145 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 IP6K1Q92551 441 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 NBPF4Q96M43 638 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 BACH2Q9BYV9 841 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 NEO1Q92859 1461 aa16.23■□□□□ 0.19
SCARB2-215ENST00000639145 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
SCARB2-215ENST00000639145 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
SCARB2-215ENST00000639145 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
SCARB2-215ENST00000639145 RAB11FIP3O75154 756 aa16.22■□□□□ 0.19
SCARB2-215ENST00000639145 PDCP20941 246 aa16.22■□□□□ 0.19
SCARB2-215ENST00000639145 PCMTD1Q96MG8 357 aaPredicted RBP16.22■□□□□ 0.19
SCARB2-215ENST00000639145 FIBPO43427 364 aa16.21■□□□□ 0.19
SCARB2-215ENST00000639145 MCM2P49736 904 aa16.21■□□□□ 0.19
SCARB2-215ENST00000639145 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
SCARB2-215ENST00000639145 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCARB2-215ENST00000639145 MEIS3Q99687 375 aa16.21■□□□□ 0.19
SCARB2-215ENST00000639145 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
SCARB2-215ENST00000639145 PIK3R4Q99570 1358 aa16.21■□□□□ 0.19
SCARB2-215ENST00000639145 TMOD2Q9NZR1 351 aa16.21■□□□□ 0.19
SCARB2-215ENST00000639145 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
SCARB2-215ENST00000639145 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.18
SCARB2-215ENST00000639145 TSPYL6Q8N831 410 aa16.21■□□□□ 0.18
SCARB2-215ENST00000639145 SAMD9LQ8IVG5 1584 aa16.21■□□□□ 0.18
SCARB2-215ENST00000639145 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
SCARB2-215ENST00000639145 IL16Q14005 1332 aa16.2■□□□□ 0.18
SCARB2-215ENST00000639145 CCDC69A6NI79 296 aa16.2■□□□□ 0.18
SCARB2-215ENST00000639145 TPM3P06753 285 aa16.2■□□□□ 0.18
SCARB2-215ENST00000639145 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
SCARB2-215ENST00000639145 HOOK1Q9UJC3 728 aaKnown RBP16.2■□□□□ 0.18
SCARB2-215ENST00000639145 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
SCARB2-215ENST00000639145 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
SCARB2-215ENST00000639145 CEP89Q96ST8 783 aa16.19■□□□□ 0.18
SCARB2-215ENST00000639145 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms