RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 MTHFSP49914 203 aa24.91■■□□□ 1.58
CLN6-214ENST00000636314 CNGB1Q14028 1251 aaPredicted RBP24.91■■□□□ 1.58
CLN6-214ENST00000636314 NKX1-1Q15270 411 aaPredicted RBP24.91■■□□□ 1.58
CLN6-214ENST00000636314 IFNL2Q8IZJ0 200 aa24.91■■□□□ 1.58
CLN6-214ENST00000636314 WWC3Q9ULE0 1092 aa24.91■■□□□ 1.58
CLN6-214ENST00000636314 PHKG2P15735 406 aa24.9■■□□□ 1.58
CLN6-214ENST00000636314 IL13P35225 146 aa24.89■■□□□ 1.58
CLN6-214ENST00000636314 AEBP1Q8IUX7 1158 aa24.89■■□□□ 1.58
CLN6-214ENST00000636314 GPBP1L1Q9HC44 474 aaPredicted RBP24.89■■□□□ 1.58
CLN6-214ENST00000636314 TMOD3Q9NYL9 352 aa24.89■■□□□ 1.58
CLN6-214ENST00000636314 LOC102724428A0A0B4J2F2 783 aa24.88■■□□□ 1.57
CLN6-214ENST00000636314 SIK1P57059 783 aa24.88■■□□□ 1.57
CLN6-214ENST00000636314 LINC00116Q8NCU8 138 aa24.88■■□□□ 1.57
CLN6-214ENST00000636314 ZNF526Q8TF50 670 aaPredicted RBP24.88■■□□□ 1.57
CLN6-214ENST00000636314 SSFA2P28290 1259 aa24.87■■□□□ 1.57
CLN6-214ENST00000636314 PLEKHO1Q53GL0 409 aaPredicted RBP24.87■■□□□ 1.57
CLN6-214ENST00000636314 SULT6B1Q6IMI4 303 aa24.87■■□□□ 1.57
CLN6-214ENST00000636314 KDRP35968 1356 aa24.87■■□□□ 1.57
CLN6-214ENST00000636314 ADCY9O60503 1353 aa24.85■■□□□ 1.57
CLN6-214ENST00000636314 AMOTQ4VCS5 1084 aa24.85■■□□□ 1.57
CLN6-214ENST00000636314 GNPATO15228 680 aa24.84■■□□□ 1.57
CLN6-214ENST00000636314 ZNF530Q6P9A1 599 aaPredicted RBP24.84■■□□□ 1.57
CLN6-214ENST00000636314 ASAP1Q9ULH1 1129 aa24.84■■□□□ 1.57
CLN6-214ENST00000636314 HSP90AB1P08238 724 aaKnown RBP24.83■■□□□ 1.57
CLN6-214ENST00000636314 ATP6V1AP38606 617 aa24.83■■□□□ 1.57
CLN6-214ENST00000636314 ITPK1Q13572 414 aa24.82■■□□□ 1.56
CLN6-214ENST00000636314 N4BP2Q86UW6 1770 aaPredicted RBP24.81■■□□□ 1.56
CLN6-214ENST00000636314 DIAPH1O60610 1272 aaKnown RBP24.81■■□□□ 1.56
CLN6-214ENST00000636314 COL3A1P02461 1466 aaPredicted RBP24.81■■□□□ 1.56
CLN6-214ENST00000636314 C1orf141Q5JVX7 400 aa24.8■■□□□ 1.56
CLN6-214ENST00000636314 KIF13BQ9NQT8 1826 aa24.79■■□□□ 1.56
CLN6-214ENST00000636314 KDM6AO15550 1401 aaPredicted RBP24.79■■□□□ 1.56
CLN6-214ENST00000636314 DCAF5Q96JK2 942 aa24.79■■□□□ 1.56
CLN6-214ENST00000636314 ATG3Q9NT62 314 aa24.78■■□□□ 1.56
CLN6-214ENST00000636314 MMP10P09238 476 aa24.77■■□□□ 1.56
CLN6-214ENST00000636314 HMOX1P09601 288 aa24.77■■□□□ 1.56
CLN6-214ENST00000636314 KIAA1551Q9HCM1 1747 aa24.77■■□□□ 1.56
CLN6-214ENST00000636314 ERVV-2B6SEH9 535 aa24.76■■□□□ 1.55
CLN6-214ENST00000636314 CICQ96RK0 1608 aaPredicted RBP24.75■■□□□ 1.55
CLN6-214ENST00000636314 COL5A3P25940 1745 aaPredicted RBP24.75■■□□□ 1.55
CLN6-214ENST00000636314 SCN11AQ9UI33 1791 aa24.75■■□□□ 1.55
CLN6-214ENST00000636314 HSPA6P17066 643 aa24.75■■□□□ 1.55
CLN6-214ENST00000636314 IFFO2Q5TF58 517 aa24.75■■□□□ 1.55
CLN6-214ENST00000636314 ZNF831Q5JPB2 1677 aa24.75■■□□□ 1.55
CLN6-214ENST00000636314 RBM42Q9BTD8 480 aaKnown RBP24.74■■□□□ 1.55
CLN6-214ENST00000636314 RTCBQ9Y3I0 505 aaKnown RBP24.74■■□□□ 1.55
CLN6-214ENST00000636314 VIRMAQ69YN4 1812 aaKnown RBP24.73■■□□□ 1.55
CLN6-214ENST00000636314 PXDNLA1KZ92 1463 aa24.73■■□□□ 1.55
CLN6-214ENST00000636314 TRAPPC3LQ5T215 181 aa24.73■■□□□ 1.55
CLN6-214ENST00000636314 U2SURPO15042 1029 aaKnown RBP24.72■■□□□ 1.55
CLN6-214ENST00000636314 CABP4P57796 275 aa24.72■■□□□ 1.55
CLN6-214ENST00000636314 CFAP53Q96M91 514 aa24.72■■□□□ 1.55
CLN6-214ENST00000636314 C4AP0C0L4 1744 aa24.7■■□□□ 1.54
CLN6-214ENST00000636314 AKAP4Q5JQC9 854 aa24.7■■□□□ 1.54
CLN6-214ENST00000636314 NLGN1Q8N2Q7 840 aa24.69■■□□□ 1.54
CLN6-214ENST00000636314 SLC4A9Q96Q91 983 aa24.69■■□□□ 1.54
CLN6-214ENST00000636314 BCS1LQ9Y276 419 aa24.69■■□□□ 1.54
CLN6-214ENST00000636314 MYH14Q7Z406 1995 aaKnown RBP24.69■■□□□ 1.54
CLN6-214ENST00000636314 BRCA1P38398 1863 aaKnown RBP24.68■■□□□ 1.54
CLN6-214ENST00000636314 PPP2R1AP30153 589 aa24.68■■□□□ 1.54
CLN6-214ENST00000636314 A0A0G2JLW4 131 aa24.67■■□□□ 1.54
CLN6-214ENST00000636314 KIF3CO14782 793 aa24.67■■□□□ 1.54
CLN6-214ENST00000636314 TGFB2P61812 414 aa24.67■■□□□ 1.54
CLN6-214ENST00000636314 ARHGEF1Q92888 912 aaKnown RBP24.67■■□□□ 1.54
CLN6-214ENST00000636314 C10orf71Q711Q0 1435 aa24.67■■□□□ 1.54
CLN6-214ENST00000636314 RFC4P35249 363 aa24.66■■□□□ 1.54
CLN6-214ENST00000636314 CCDC87Q9NVE4 849 aa24.66■■□□□ 1.54
CLN6-214ENST00000636314 CNTNAP4Q9C0A0 1308 aa24.65■■□□□ 1.54
CLN6-214ENST00000636314 MRC1P22897 1456 aa24.65■■□□□ 1.54
CLN6-214ENST00000636314 ADRA2BP18089 450 aa24.65■■□□□ 1.54
CLN6-214ENST00000636314 MTHFSDQ2M296 383 aaKnown RBP24.65■■□□□ 1.54
CLN6-214ENST00000636314 RC3H1Q5TC82 1133 aaKnown RBP24.65■■□□□ 1.54
CLN6-214ENST00000636314 ADAMTS7Q9UKP4 1686 aa24.65■■□□□ 1.54
CLN6-214ENST00000636314 ARHGAP27Q6ZUM4 889 aa24.64■■□□□ 1.54
CLN6-214ENST00000636314 NFATC2IPQ8NCF5 419 aa24.64■■□□□ 1.54
CLN6-214ENST00000636314 PARP3Q9Y6F1 533 aa24.64■■□□□ 1.54
CLN6-214ENST00000636314 ARFGEF1Q9Y6D6 1849 aa24.63■■□□□ 1.53
CLN6-214ENST00000636314 RPS6KA4O75676 772 aa24.63■■□□□ 1.53
CLN6-214ENST00000636314 GYS1P13807 737 aa24.63■■□□□ 1.53
CLN6-214ENST00000636314 NUDCQ9Y266 331 aa24.63■■□□□ 1.53
CLN6-214ENST00000636314 FCHSD2O94868 740 aa24.62■■□□□ 1.53
CLN6-214ENST00000636314 DPEP1P16444 411 aa24.62■■□□□ 1.53
CLN6-214ENST00000636314 RNMTO43148 476 aaKnown RBP24.6■■□□□ 1.53
CLN6-214ENST00000636314 PTCD1O75127 700 aaKnown RBP24.6■■□□□ 1.53
CLN6-214ENST00000636314 SLC52A2Q9HAB3 445 aa24.6■■□□□ 1.53
CLN6-214ENST00000636314 LGR6Q9HBX8 967 aa24.6■■□□□ 1.53
CLN6-214ENST00000636314 TJP1Q07157 1748 aa24.6■■□□□ 1.53
CLN6-214ENST00000636314 GAS2L2Q8NHY3 880 aa24.59■■□□□ 1.53
CLN6-214ENST00000636314 PRKAR2BP31323 418 aa24.58■■□□□ 1.53
CLN6-214ENST00000636314 U2AF1L5P0DN76 240 aaPredicted RBP24.57■■□□□ 1.52
CLN6-214ENST00000636314 U2AF1Q01081 240 aaKnown RBP eCLIP24.57■■□□□ 1.52
CLN6-214ENST00000636314 RSPH6AQ9H0K4 717 aa24.57■■□□□ 1.52
CLN6-214ENST00000636314 CRKLP46109 303 aaKnown RBP24.56■■□□□ 1.52
CLN6-214ENST00000636314 TOMM70O94826 608 aa24.55■■□□□ 1.52
CLN6-214ENST00000636314 APLP1P51693 650 aa24.55■■□□□ 1.52
CLN6-214ENST00000636314 SRP68Q9UHB9 627 aaKnown RBP24.55■■□□□ 1.52
CLN6-214ENST00000636314 GNAT3A8MTJ3 354 aa24.54■■□□□ 1.52
CLN6-214ENST00000636314 NMRK2Q9NPI5 230 aa24.54■■□□□ 1.52
CLN6-214ENST00000636314 KCNA3P22001 575 aa24.53■■□□□ 1.52
CLN6-214ENST00000636314 SIPA1L3O60292 1781 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms