RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MRPL50Q8N5N7 158 aaKnown RBP9.05□□□□□ -0.96
BRCA1-230ENST00000634433 IP6K1Q92551 441 aa9.05□□□□□ -0.96
BRCA1-230ENST00000634433 KIAA0232Q92628 1395 aa9.05□□□□□ -0.96
BRCA1-230ENST00000634433 FAM83GA6ND36 823 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 RBM33Q96EV2 1170 aaKnown RBP9.04□□□□□ -0.96
BRCA1-230ENST00000634433 API5Q9BZZ5 524 aaKnown RBP9.04□□□□□ -0.96
BRCA1-230ENST00000634433 TNNQ9UQP3 1299 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 DCCP43146 1447 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 DLG5Q8TDM6 1919 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 ATF3P18847 181 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 RXRBP28702 533 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 FAM161AQ3B820 660 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 PSMD1Q99460 953 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 PCDHB15Q9Y5E8 787 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 NHSL1Q5SYE7 1610 aa9.04□□□□□ -0.96
BRCA1-230ENST00000634433 IRF5Q13568 498 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 DCTN1Q14203 1278 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 MTHFSDQ2M296 383 aaKnown RBP9.03□□□□□ -0.96
BRCA1-230ENST00000634433 SLAIN2Q9P270 581 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 ATXN8OSP0DMR3 200 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 HDAC1Q13547 482 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-230ENST00000634433 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 TSPYL6Q8N831 410 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 C8orf58Q8NAV2 365 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 BABAM1Q9NWV8 329 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 LRP6O75581 1613 aa9.03□□□□□ -0.96
BRCA1-230ENST00000634433 GNAT3A8MTJ3 354 aa9.02□□□□□ -0.96
BRCA1-230ENST00000634433 MCM10Q7L590 875 aa9.02□□□□□ -0.96
BRCA1-230ENST00000634433 KRT28Q7Z3Y7 464 aa9.02□□□□□ -0.96
BRCA1-230ENST00000634433 ORAI2Q96SN7 254 aa9.02□□□□□ -0.96
BRCA1-230ENST00000634433 FOXO3O43524 673 aa9.02□□□□□ -0.97
BRCA1-230ENST00000634433 RGS3P49796 1198 aa9.02□□□□□ -0.97
BRCA1-230ENST00000634433 MEX3CQ5U5Q3 659 aaKnown RBP9.02□□□□□ -0.97
BRCA1-230ENST00000634433 ELL2O00472 640 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-230ENST00000634433 CRB1P82279 1406 aa9.01□□□□□ -0.97
BRCA1-230ENST00000634433 SOS1Q07889 1333 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-230ENST00000634433 KIF1AQ12756 1690 aa9.01□□□□□ -0.97
BRCA1-230ENST00000634433 C1orf167Q5SNV9 1468 aa9.01□□□□□ -0.97
BRCA1-230ENST00000634433 NAP1L5Q96NT1 182 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-230ENST00000634433 IPO9Q96P70 1041 aaKnown RBP9.01□□□□□ -0.97
BRCA1-230ENST00000634433 ZBTB40Q9NUA8 1239 aa9.01□□□□□ -0.97
BRCA1-230ENST00000634433 MARF1Q9Y4F3 1742 aaKnown RBP9.01□□□□□ -0.97
BRCA1-230ENST00000634433 GCP02774 474 aa9.01□□□□□ -0.97
BRCA1-230ENST00000634433 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
BRCA1-230ENST00000634433 LTV1Q96GA3 475 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-230ENST00000634433 TSPYL4Q9UJ04 414 aa9.01□□□□□ -0.97
BRCA1-230ENST00000634433 NFAT5O94916 1531 aa9□□□□□ -0.97
BRCA1-230ENST00000634433 PTPRCP08575 1304 aa9□□□□□ -0.97
BRCA1-230ENST00000634433 ARHGEF25Q86VW2 580 aa9□□□□□ -0.97
BRCA1-230ENST00000634433 KCNV2Q8TDN2 545 aa9□□□□□ -0.97
BRCA1-230ENST00000634433 MST1RQ04912 1400 aa9□□□□□ -0.97
BRCA1-230ENST00000634433 MAP3K5Q99683 1374 aa8.99□□□□□ -0.97
BRCA1-230ENST00000634433 ABCC4O15439 1325 aa8.99□□□□□ -0.97
BRCA1-230ENST00000634433 USP19O94966 1318 aa8.99□□□□□ -0.97
BRCA1-230ENST00000634433 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
BRCA1-230ENST00000634433 DDRGK1Q96HY6 314 aa8.99□□□□□ -0.97
BRCA1-230ENST00000634433 PDZRN3Q9UPQ7 1066 aa8.99□□□□□ -0.97
BRCA1-230ENST00000634433 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-230ENST00000634433 TAF7Q15545 349 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-230ENST00000634433 SLIT3O75094 1523 aa8.98□□□□□ -0.97
BRCA1-230ENST00000634433 MSH5O43196 834 aa8.98□□□□□ -0.97
BRCA1-230ENST00000634433 AMOTQ4VCS5 1084 aa8.98□□□□□ -0.97
BRCA1-230ENST00000634433 PLEKHO1Q53GL0 409 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-230ENST00000634433 SKAP1Q86WV1 359 aa8.98□□□□□ -0.97
BRCA1-230ENST00000634433 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-230ENST00000634433 LRP5O75197 1615 aa8.98□□□□□ -0.97
BRCA1-230ENST00000634433 PHRF1Q9P1Y6 1649 aaKnown RBP8.98□□□□□ -0.97
BRCA1-230ENST00000634433 RBM6P78332 1123 aaKnown RBP8.98□□□□□ -0.97
BRCA1-230ENST00000634433 RETREG2Q8NC44 543 aa8.98□□□□□ -0.97
BRCA1-230ENST00000634433 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
BRCA1-230ENST00000634433 NPHP3Q7Z494 1330 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 LTN1O94822 1766 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 C8orf34Q49A92 452 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 SMC5Q8IY18 1101 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
BRCA1-230ENST00000634433 XPCQ01831 940 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-230ENST00000634433 NBPF6Q5VWK0 638 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 INTS3Q68E01 1043 aaKnown RBP8.97□□□□□ -0.97
BRCA1-230ENST00000634433 GCC1Q96CN9 775 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 NBPF4Q96M43 638 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 STK31Q9BXU1 1019 aa8.97□□□□□ -0.97
BRCA1-230ENST00000634433 AKAP4Q5JQC9 854 aa8.96□□□□□ -0.97
BRCA1-230ENST00000634433 CCDC30Q5VVM6 783 aa8.96□□□□□ -0.97
BRCA1-230ENST00000634433 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
BRCA1-230ENST00000634433 ANKRD24Q8TF21 1146 aa8.96□□□□□ -0.98
BRCA1-230ENST00000634433 NGLY1Q96IV0 654 aa8.96□□□□□ -0.98
BRCA1-230ENST00000634433 TRPM3Q9HCF6 1732 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-230ENST00000634433 USHBP1Q8N6Y0 703 aa8.95□□□□□ -0.98
BRCA1-230ENST00000634433 TRAIPQ9BWF2 469 aa8.95□□□□□ -0.98
BRCA1-230ENST00000634433 WDR70Q9NW82 654 aa8.95□□□□□ -0.98
BRCA1-230ENST00000634433 MIS18AQ9NYP9 233 aa8.95□□□□□ -0.98
BRCA1-230ENST00000634433 RGS12O14924 1447 aa8.95□□□□□ -0.98
BRCA1-230ENST00000634433 SMARCA5O60264 1052 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-230ENST00000634433 C1orf141Q5JVX7 400 aa8.95□□□□□ -0.98
BRCA1-230ENST00000634433 CCT4P50991 539 aaKnown RBP8.94□□□□□ -0.98
BRCA1-230ENST00000634433 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.94□□□□□ -0.98
BRCA1-230ENST00000634433 COL22A1Q8NFW1 1626 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-230ENST00000634433 CEMIPQ8WUJ3 1361 aa8.94□□□□□ -0.98
BRCA1-230ENST00000634433 CLSTN1O94985 981 aa8.94□□□□□ -0.98
BRCA1-230ENST00000634433 HOXB7P09629 217 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms