RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 KCNQ3O43525 872 aa18.5■□□□□ 0.55
PHACTR4-209ENST00000633371 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
PHACTR4-209ENST00000633371 ZNF772Q68DY9 489 aaPredicted RBP18.5■□□□□ 0.55
PHACTR4-209ENST00000633371 SLC52A2Q9HAB3 445 aa18.5■□□□□ 0.55
PHACTR4-209ENST00000633371 PAPPAQ13219 1627 aa18.49■□□□□ 0.55
PHACTR4-209ENST00000633371 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
PHACTR4-209ENST00000633371 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
PHACTR4-209ENST00000633371 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
PHACTR4-209ENST00000633371 SEPT12Q8IYM1 358 aa18.48■□□□□ 0.55
PHACTR4-209ENST00000633371 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
PHACTR4-209ENST00000633371 C8orf58Q8NAV2 365 aa18.48■□□□□ 0.55
PHACTR4-209ENST00000633371 NFATC2IPQ8NCF5 419 aa18.48■□□□□ 0.55
PHACTR4-209ENST00000633371 BABAM1Q9NWV8 329 aa18.48■□□□□ 0.55
PHACTR4-209ENST00000633371 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
PHACTR4-209ENST00000633371 TEFQ10587 303 aa18.47■□□□□ 0.55
PHACTR4-209ENST00000633371 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
PHACTR4-209ENST00000633371 RBM6P78332 1123 aaKnown RBP18.46■□□□□ 0.55
PHACTR4-209ENST00000633371 TSPYL4Q9UJ04 414 aa18.46■□□□□ 0.55
PHACTR4-209ENST00000633371 BTBD11A6QL63 1104 aa18.44■□□□□ 0.54
PHACTR4-209ENST00000633371 CABP4P57796 275 aa18.44■□□□□ 0.54
PHACTR4-209ENST00000633371 SLC39A6Q13433 755 aa18.44■□□□□ 0.54
PHACTR4-209ENST00000633371 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
PHACTR4-209ENST00000633371 VAMP4O75379 141 aa18.43■□□□□ 0.54
PHACTR4-209ENST00000633371 EIF4A1P60842 406 aaKnown RBP18.43■□□□□ 0.54
PHACTR4-209ENST00000633371 PIGBQ92521 554 aa18.43■□□□□ 0.54
PHACTR4-209ENST00000633371 C5P01031 1676 aa18.43■□□□□ 0.54
PHACTR4-209ENST00000633371 BCL9O00512 1426 aa18.42■□□□□ 0.54
PHACTR4-209ENST00000633371 FAM182BQ5T319 152 aa18.42■□□□□ 0.54
PHACTR4-209ENST00000633371 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
PHACTR4-209ENST00000633371 KCPQ6ZWJ8 1503 aa18.41■□□□□ 0.54
PHACTR4-209ENST00000633371 A0A0G2JS52 829 aa18.41■□□□□ 0.54
PHACTR4-209ENST00000633371 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
PHACTR4-209ENST00000633371 PRIM1P49642 420 aaKnown RBP18.41■□□□□ 0.54
PHACTR4-209ENST00000633371 MYT1Q01538 1121 aa18.41■□□□□ 0.54
PHACTR4-209ENST00000633371 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
PHACTR4-209ENST00000633371 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
PHACTR4-209ENST00000633371 ACSBG1Q96GR2 724 aa18.4■□□□□ 0.54
PHACTR4-209ENST00000633371 NHSQ6T4R5 1651 aa18.4■□□□□ 0.54
PHACTR4-209ENST00000633371 RGS12O14924 1447 aa18.4■□□□□ 0.54
PHACTR4-209ENST00000633371 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 KCNQ2O43526 872 aa18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 RXRBP28702 533 aa18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 TWISTNBQ3B726 338 aaPredicted RBP18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 PTF1AQ7RTS3 328 aa18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 BTAF1O14981 1849 aa18.39■□□□□ 0.53
PHACTR4-209ENST00000633371 BCAR3O75815 825 aa18.38■□□□□ 0.53
PHACTR4-209ENST00000633371 CT47B1P0C2W7 299 aaPredicted RBP18.38■□□□□ 0.53
PHACTR4-209ENST00000633371 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
PHACTR4-209ENST00000633371 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
PHACTR4-209ENST00000633371 ASAP1Q9ULH1 1129 aa18.38■□□□□ 0.53
PHACTR4-209ENST00000633371 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
PHACTR4-209ENST00000633371 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
PHACTR4-209ENST00000633371 SSH1Q8WYL5 1049 aa18.36■□□□□ 0.53
PHACTR4-209ENST00000633371 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
PHACTR4-209ENST00000633371 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
PHACTR4-209ENST00000633371 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
PHACTR4-209ENST00000633371 TCERG1O14776 1098 aaKnown RBP18.34■□□□□ 0.53
PHACTR4-209ENST00000633371 TJP1Q07157 1748 aa18.33■□□□□ 0.52
PHACTR4-209ENST00000633371 SLC4A9Q96Q91 983 aa18.33■□□□□ 0.52
PHACTR4-209ENST00000633371 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.52
PHACTR4-209ENST00000633371 MRPL50Q8N5N7 158 aaKnown RBP18.32■□□□□ 0.52
PHACTR4-209ENST00000633371 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
PHACTR4-209ENST00000633371 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
PHACTR4-209ENST00000633371 PLIN1O60240 522 aa18.31■□□□□ 0.52
PHACTR4-209ENST00000633371 HOXB7P09629 217 aa18.31■□□□□ 0.52
PHACTR4-209ENST00000633371 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
PHACTR4-209ENST00000633371 ZNF428Q96B54 188 aa18.31■□□□□ 0.52
PHACTR4-209ENST00000633371 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
PHACTR4-209ENST00000633371 LY75O60449 1722 aa18.31■□□□□ 0.52
PHACTR4-209ENST00000633371 BRPF1P55201 1214 aaPredicted RBP18.3■□□□□ 0.52
PHACTR4-209ENST00000633371 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
PHACTR4-209ENST00000633371 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
PHACTR4-209ENST00000633371 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
PHACTR4-209ENST00000633371 CICQ96RK0 1608 aaPredicted RBP18.3■□□□□ 0.52
PHACTR4-209ENST00000633371 ZNF831Q5JPB2 1677 aa18.29■□□□□ 0.52
PHACTR4-209ENST00000633371 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
PHACTR4-209ENST00000633371 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
PHACTR4-209ENST00000633371 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
PHACTR4-209ENST00000633371 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
PHACTR4-209ENST00000633371 FAM196AQ6ZSG2 479 aa18.28■□□□□ 0.52
PHACTR4-209ENST00000633371 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
PHACTR4-209ENST00000633371 MYH14Q7Z406 1995 aaKnown RBP18.28■□□□□ 0.52
PHACTR4-209ENST00000633371 EIF2S2P20042 333 aaKnown RBP18.27■□□□□ 0.52
PHACTR4-209ENST00000633371 G2E3Q7L622 706 aa18.27■□□□□ 0.52
PHACTR4-209ENST00000633371 COL5A3P25940 1745 aaPredicted RBP18.26■□□□□ 0.51
PHACTR4-209ENST00000633371 TAF1LQ8IZX4 1826 aa18.26■□□□□ 0.51
PHACTR4-209ENST00000633371 PDIA6Q15084 440 aa18.26■□□□□ 0.51
PHACTR4-209ENST00000633371 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
PHACTR4-209ENST00000633371 C20orf194Q5TEA3 1177 aa18.26■□□□□ 0.51
PHACTR4-209ENST00000633371 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
PHACTR4-209ENST00000633371 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
PHACTR4-209ENST00000633371 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
PHACTR4-209ENST00000633371 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
PHACTR4-209ENST00000633371 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
PHACTR4-209ENST00000633371 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
PHACTR4-209ENST00000633371 BCL11BQ9C0K0 894 aaPredicted RBP18.25■□□□□ 0.51
PHACTR4-209ENST00000633371 NOB1Q9ULX3 412 aaKnown RBP18.25■□□□□ 0.51
PHACTR4-209ENST00000633371 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms