RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 RSPH6AQ9H0K4 717 aa24.81■■□□□ 1.56
PNKP-224ENST00000631020 TMOD3Q9NYL9 352 aa24.81■■□□□ 1.56
PNKP-224ENST00000631020 ADAMTS8Q9UP79 889 aa24.81■■□□□ 1.56
PNKP-224ENST00000631020 FCHSD2O94868 740 aa24.79■■□□□ 1.56
PNKP-224ENST00000631020 WDR43Q15061 677 aaKnown RBP eCLIP24.79■■□□□ 1.56
PNKP-224ENST00000631020 DCAF5Q96JK2 942 aa24.78■■□□□ 1.56
PNKP-224ENST00000631020 ERVV-2B6SEH9 535 aa24.77■■□□□ 1.56
PNKP-224ENST00000631020 PRKAR2BP31323 418 aa24.77■■□□□ 1.56
PNKP-224ENST00000631020 MAP3K5Q99683 1374 aa24.77■■□□□ 1.56
PNKP-224ENST00000631020 C4BP0C0L5 1744 aa24.77■■□□□ 1.56
PNKP-224ENST00000631020 ARXQ96QS3 562 aa24.76■■□□□ 1.55
PNKP-224ENST00000631020 ZNF831Q5JPB2 1677 aa24.75■■□□□ 1.55
PNKP-224ENST00000631020 ZNF530Q6P9A1 599 aaPredicted RBP24.75■■□□□ 1.55
PNKP-224ENST00000631020 FLAD1Q8NFF5 587 aa24.75■■□□□ 1.55
PNKP-224ENST00000631020 PHACTR3Q96KR7 559 aa24.75■■□□□ 1.55
PNKP-224ENST00000631020 PLEKHF1Q96S99 279 aa24.75■■□□□ 1.55
PNKP-224ENST00000631020 DCAF8L1A6NGE4 600 aa24.74■■□□□ 1.55
PNKP-224ENST00000631020 LOC102724428A0A0B4J2F2 783 aa24.73■■□□□ 1.55
PNKP-224ENST00000631020 SIK1P57059 783 aa24.73■■□□□ 1.55
PNKP-224ENST00000631020 KDM6AO15550 1401 aaPredicted RBP24.72■■□□□ 1.55
PNKP-224ENST00000631020 POLD1P28340 1107 aa24.72■■□□□ 1.55
PNKP-224ENST00000631020 SYT17Q9BSW7 474 aa24.72■■□□□ 1.55
PNKP-224ENST00000631020 FHDC1Q9C0D6 1143 aaPredicted RBP24.72■■□□□ 1.55
PNKP-224ENST00000631020 UBR3Q6ZT12 1888 aa24.72■■□□□ 1.55
PNKP-224ENST00000631020 C1orf141Q5JVX7 400 aa24.71■■□□□ 1.55
PNKP-224ENST00000631020 FAM9BQ8IZU0 186 aa24.71■■□□□ 1.55
PNKP-224ENST00000631020 ASAP1Q9ULH1 1129 aa24.71■■□□□ 1.55
PNKP-224ENST00000631020 COL23A1Q86Y22 540 aaPredicted RBP24.71■■□□□ 1.55
PNKP-224ENST00000631020 ATG3Q9NT62 314 aa24.71■■□□□ 1.55
PNKP-224ENST00000631020 CCDC146Q8IYE0 955 aa24.7■■□□□ 1.54
PNKP-224ENST00000631020 SCN11AQ9UI33 1791 aa24.69■■□□□ 1.54
PNKP-224ENST00000631020 MTHFSDQ2M296 383 aaKnown RBP24.69■■□□□ 1.54
PNKP-224ENST00000631020 AK7Q96M32 723 aa24.68■■□□□ 1.54
PNKP-224ENST00000631020 PNNQ9H307 717 aaKnown RBP24.67■■□□□ 1.54
PNKP-224ENST00000631020 ATP6V1AP38606 617 aa24.66■■□□□ 1.54
PNKP-224ENST00000631020 CABP4P57796 275 aa24.66■■□□□ 1.54
PNKP-224ENST00000631020 RUNDC1Q96C34 613 aa24.66■■□□□ 1.54
PNKP-224ENST00000631020 MSH5O43196 834 aa24.65■■□□□ 1.54
PNKP-224ENST00000631020 SSFA2P28290 1259 aa24.65■■□□□ 1.54
PNKP-224ENST00000631020 AKAP4Q5JQC9 854 aa24.65■■□□□ 1.54
PNKP-224ENST00000631020 LINC00116Q8NCU8 138 aa24.65■■□□□ 1.54
PNKP-224ENST00000631020 COL5A3P25940 1745 aaPredicted RBP24.63■■□□□ 1.53
PNKP-224ENST00000631020 ITPK1Q13572 414 aa24.63■■□□□ 1.53
PNKP-224ENST00000631020 VIRMAQ69YN4 1812 aaKnown RBP24.63■■□□□ 1.53
PNKP-224ENST00000631020 ADAMTS7Q9UKP4 1686 aa24.62■■□□□ 1.53
PNKP-224ENST00000631020 CICQ96RK0 1608 aaPredicted RBP24.62■■□□□ 1.53
PNKP-224ENST00000631020 GAS2L2Q8NHY3 880 aa24.61■■□□□ 1.53
PNKP-224ENST00000631020 MAPK8IP3Q9UPT6 1336 aa24.61■■□□□ 1.53
PNKP-224ENST00000631020 MRC1P22897 1456 aa24.61■■□□□ 1.53
PNKP-224ENST00000631020 NEFMP07197 916 aa24.61■■□□□ 1.53
PNKP-224ENST00000631020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.6■■□□□ 1.53
PNKP-224ENST00000631020 NFATC2IPQ8NCF5 419 aa24.6■■□□□ 1.53
PNKP-224ENST00000631020 APAF1O14727 1248 aa24.59■■□□□ 1.53
PNKP-224ENST00000631020 NFE2L2Q16236 605 aa24.59■■□□□ 1.53
PNKP-224ENST00000631020 AMIGO3Q86WK7 504 aa24.59■■□□□ 1.53
PNKP-224ENST00000631020 SLC4A9Q96Q91 983 aa24.59■■□□□ 1.53
PNKP-224ENST00000631020 UTRNP46939 3433 aa24.58■■□□□ 1.53
PNKP-224ENST00000631020 TMPOP42166 694 aaKnown RBP24.58■■□□□ 1.53
PNKP-224ENST00000631020 RC3H1Q5TC82 1133 aaKnown RBP24.58■■□□□ 1.53
PNKP-224ENST00000631020 SENP3-EIF4A1A0A087X0R7 540 aa24.57■■□□□ 1.52
PNKP-224ENST00000631020 GNPATO15228 680 aa24.57■■□□□ 1.52
PNKP-224ENST00000631020 RBM42Q9BTD8 480 aaKnown RBP24.57■■□□□ 1.52
PNKP-224ENST00000631020 RRP7AQ9Y3A4 280 aaKnown RBP24.57■■□□□ 1.52
PNKP-224ENST00000631020 SLC52A2Q9HAB3 445 aa24.56■■□□□ 1.52
PNKP-224ENST00000631020 CNTNAP4Q9C0A0 1308 aa24.56■■□□□ 1.52
PNKP-224ENST00000631020 GNAT3A8MTJ3 354 aa24.56■■□□□ 1.52
PNKP-224ENST00000631020 PHF14O94880 888 aa24.56■■□□□ 1.52
PNKP-224ENST00000631020 MSL1Q68DK7 614 aa24.55■■□□□ 1.52
PNKP-224ENST00000631020 LGR6Q9HBX8 967 aa24.55■■□□□ 1.52
PNKP-224ENST00000631020 RNMTO43148 476 aaKnown RBP24.54■■□□□ 1.52
PNKP-224ENST00000631020 ADRA2BP18089 450 aa24.54■■□□□ 1.52
PNKP-224ENST00000631020 YY1P25490 414 aa24.54■■□□□ 1.52
PNKP-224ENST00000631020 RIPK4P57078 832 aa24.54■■□□□ 1.52
PNKP-224ENST00000631020 NEUROD2Q15784 382 aa24.54■■□□□ 1.52
PNKP-224ENST00000631020 CHD4Q14839 1912 aa24.53■■□□□ 1.52
PNKP-224ENST00000631020 MYH14Q7Z406 1995 aaKnown RBP24.53■■□□□ 1.52
PNKP-224ENST00000631020 IL17REQ8NFR9 667 aa24.53■■□□□ 1.52
PNKP-224ENST00000631020 RTCBQ9Y3I0 505 aaKnown RBP24.53■■□□□ 1.52
PNKP-224ENST00000631020 TJP1Q07157 1748 aa24.53■■□□□ 1.52
PNKP-224ENST00000631020 KLHL34Q8N239 644 aa24.51■■□□□ 1.51
PNKP-224ENST00000631020 CD2APQ9Y5K6 639 aa24.51■■□□□ 1.51
PNKP-224ENST00000631020 DLG5Q8TDM6 1919 aa24.51■■□□□ 1.51
PNKP-224ENST00000631020 PTCD1O75127 700 aaKnown RBP24.51■■□□□ 1.51
PNKP-224ENST00000631020 DCTN1Q14203 1278 aa24.51■■□□□ 1.51
PNKP-224ENST00000631020 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
PNKP-224ENST00000631020 HTATSF1O43719 755 aaKnown RBP24.5■■□□□ 1.51
PNKP-224ENST00000631020 RPS6KA4O75676 772 aa24.5■■□□□ 1.51
PNKP-224ENST00000631020 TRAPPC3LQ5T215 181 aa24.5■■□□□ 1.51
PNKP-224ENST00000631020 MCM10Q7L590 875 aa24.5■■□□□ 1.51
PNKP-224ENST00000631020 SMIM5Q71RC9 77 aa24.49■■□□□ 1.51
PNKP-224ENST00000631020 NLGN2Q8NFZ4 835 aa24.48■■□□□ 1.51
PNKP-224ENST00000631020 UBR2Q8IWV8 1755 aa24.48■■□□□ 1.51
PNKP-224ENST00000631020 GOLGB1Q14789 3259 aaKnown RBP24.47■■□□□ 1.51
PNKP-224ENST00000631020 RTF1Q92541 710 aaKnown RBP24.47■■□□□ 1.51
PNKP-224ENST00000631020 C4AP0C0L4 1744 aa24.47■■□□□ 1.51
PNKP-224ENST00000631020 CEMIPQ8WUJ3 1361 aa24.47■■□□□ 1.51
PNKP-224ENST00000631020 GPR162Q16538 588 aa24.46■■□□□ 1.51
PNKP-224ENST00000631020 THUMPD2Q9BTF0 503 aaKnown RBP24.46■■□□□ 1.51
PNKP-224ENST00000631020 SIPA1L3O60292 1781 aaPredicted RBP24.46■■□□□ 1.51
PNKP-224ENST00000631020 KCPQ6ZWJ8 1503 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms